ID: uc002xqs.2_intron_10_0_chr20_44573670_f.3p
GENE: (11)
chr20:44574150-44574399+


(2)
AGO2.ip 		(1)
B-CELL 		(2)
BRAIN 		(25)
BREAST 		(24)
CELL-LINE 		(14)
CERVIX 		(4)
HEART 		(1)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(12)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
CACAGGCCACCAGTTTCTGCCCCGGCCAGTTGCCTGGCTGGTTTCTTTTTATGGCTTTTCATTCCCTTTCTACTGAACTGGGCCAGAGTATACTGATCTGTGGAATGGGACTTCCCTCTCTCGGTACAAAGCATGTGGCCCACAGTGGCTGCAGCGTGAGAATGAGGAGTGTGGTCCCTCACTGCTCTCCCTGCCCACAGAGGAGGTGGAGGCCCCTGAGGTGGAGCCCCGCCTAGTGTACTGCTACCCA
.....................................................(((((((((((.........((.(((((((((.((.........)).)))...(((....)))...)))))).))..((.((..(((......)))..))))....)))))))))))................................................................................
............................................45...........................................................................................................................170..............................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782SRR189783SRR189785SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR191470(GSM715580)
118genomic small RNA (size selected RNA from . (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577739(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR191464(GSM715574)
112genomic small RNA (size selected RNA from . (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR191467(GSM715577)
115genomic small RNA (size selected RNA from . (breast)		SRR040031(GSM532916)
G013T. (cervix)		SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)		SRR038862(GSM458545)
MM472. (cell line)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR191435(GSM715545)
172genomic small RNA (size selected RNA from . (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040028(GSM532913)
G026N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)		SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)		SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040006(GSM532891)
G601N. (cervix)		TAX577579(Rovira)
total RNA. (breast)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		TAX577589(Rovira)
total RNA. (breast)		GSM532886(GSM532886)
G850T. (cervix)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR040027(GSM532912)
G220T. (cervix)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM532872(GSM532872)
G652T. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.................................................TATGGCTTTTCATTCCCATG.....................................................................................................................................................................................20318.000.00250.0052.002.0012.00--------1.00-----------1.00---------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCTATG......................................................................................................................................................................................1976.000.002.0065.009.00-------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTATA.....................................................................................................................................................................................20539.000.400.4033.803.201.20--------0.20-------------------------------------------------------------------------0.20-------------
.................................................TATGGCTTTTCATTCCTATT.....................................................................................................................................................................................20531.800.400.2020.400.400.60-1.40------0.40-0.20-1.00----0.400.200.40-1.20---------------------0.40----------1.00--------0.400.200.400.400.200.400.200.20-------0.200.20---0.20--0.20-0.20-----0.20-
.................................................TATGGCTTTTCATTCCTAAG.....................................................................................................................................................................................20519.600.400.2019.00----0.20--------------0.20------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTAGG.....................................................................................................................................................................................20512.400.400.6011.200.40-------------------------------------------------------------------------0.20-----------------------
.................................................TATGGCTTTTCATTCCTACG.....................................................................................................................................................................................20512.200.404.007.600.400.20------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCACG.....................................................................................................................................................................................2012.000.0010.002.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................ACAGTGGCTGCAGCGTGAGAATGAT....................................................................................2518.002.00----8.00-----------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTCTG.....................................................................................................................................................................................2057.600.400.206.000.40--------------------------------------------0.20-------------------0.200.20-----------0.20--------0.20----------
.................................................TATGGCTTTTCATTCCCATGT....................................................................................................................................................................................217.000.001.001.00------2.00--------2.00----------------------------------1.00-----------------------------------------------
.................................................TATGGCTTTTCATTCCAATG.....................................................................................................................................................................................2057.000.40-7.00--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCGATG.....................................................................................................................................................................................2056.200.400.205.600.40-------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCAAG.....................................................................................................................................................................................206.000.001.005.00--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTATC.....................................................................................................................................................................................2055.600.40-4.800.60--------------------------------------------------------------------------------------------0.20----
.................................................TATGGCTTTTCATTCCAAAG.....................................................................................................................................................................................2055.400.40-5.40--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCATG......................................................................................................................................................................................1955.000.404.600.20-0.20------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCTTAT......................................................................................................................................................................................194.000.00-4.00--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCAGG.....................................................................................................................................................................................204.000.004.00---------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCATT.....................................................................................................................................................................................204.000.003.001.00--------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCACTGCTCTCCCTGCCCACAGT.................................................233.000.00------------------------------1.00-------------1.00------------------1.00------------------------------------
.................................................TATGGCTTTTCATTCCCCTG.....................................................................................................................................................................................203.000.00-3.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................CAGTGGCTGCAGCGTGAGAATGA.....................................................................................2313.003.00--------------------1.00---------------------------1.00-----------1.00---------------------------------------
.................................................TATGGCTTTTCATTCCCTTGTGA..................................................................................................................................................................................233.000.00-----1.00--------2.00-------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCATA.....................................................................................................................................................................................203.000.003.00---------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTGTG.....................................................................................................................................................................................2052.800.40-2.000.600.20------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCTACG......................................................................................................................................................................................192.000.00-2.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................AGTGGCTGCAGCGTGAGAATGAGG...................................................................................2412.002.00--------------------------------------------------1.00-------------1.00-----------------------------------
.................................................................................................................................................TGGCTGCAGCGTGAGAATGAGGAGT................................................................................2512.002.00-----------1.00-----------------------1.00----------------------------------------------------------------
................................................TTATGGCTTTTCATTCCTATG.....................................................................................................................................................................................212.000.00-2.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................ACAGTGGCTGCAGCGTGAGA.........................................................................................2012.002.00-----------1.00---------------------------------1.00------------------------------------------------------
.............................................................................................................................................ACAGTGGCTGCAGCGTGAGAATGA.....................................................................................2412.002.00-----------------------1.00---------------1.00------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCAT......................................................................................................................................................................................192.000.002.00---------------------------------------------------------------------------------------------------
...............................................................................................................................................AGTGGCTGCAGCGTGAGAATGA.....................................................................................2212.002.00-------1.00------------------------------------------------1.00-------------------------------------------
.................................................TATGGCTTTTCATTCATA.......................................................................................................................................................................................182.000.00---------1.00---1.00--------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCATAT......................................................................................................................................................................................192.000.00-1.00--------------------------------------------1.00-----------------------------------------------------
.................................................TATGGCTTTTCATTCCTTTT.....................................................................................................................................................................................2051.200.40-1.00----------------------------------------------------------------------------------0.20---------------
..............................................................................................................................................CAGTGGCTGCAGCGTGAG..........................................................................................1811.001.00------------1.00---------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTTGA.....................................................................................................................................................................................2051.000.40-----0.20-------0.20--------0.20-0.20------------------------------------------------0.20--------------------------
..................................................................................................................................................................................TCACTGCTCTCCCTGCCCAA....................................................201.000.00-------------------------------------------------------------1.00--------------------------------------
....................................................................................................................................................CTGCAGCGTGAGAATGAGA...................................................................................191.000.00------1.00---------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCCCG.....................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------------------------------
............................................................................................CTGATCTGTGGAATGGTTTT..........................................................................................................................................201.000.00----------------------------------1.00-----------------------------------------------------------------
...............................................................................................................................................AGTGGCTGCAGCGTGAGAAT.......................................................................................2011.001.00-----------1.00----------------------------------------------------------------------------------------
........................................................................CTGAACTGGGCCAGAGTATA..............................................................................................................................................................2011.001.00-------1.00--------------------------------------------------------------------------------------------
............................................................ATTCCCTTTCTACTGAGCAG..........................................................................................................................................................................201.000.001.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................ACAGTGGCTGCAGCGTGAG..........................................................................................1911.001.00-----------------------------------------1.00----------------------------------------------------------
.................................................TATGGCTTTTCATTCCCTTGTTA..................................................................................................................................................................................231.000.00---------1.00------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCCTCA....................................................................................................................................................................................211.000.00---------------1.00------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCTAT.......................................................................................................................................................................................181.000.00---------------------------1.00------------------------------------------------------------------------
........................................................TTTCATTCCCTTTCTATAAA..............................................................................................................................................................................201.000.00------------------------------------------------------------------1.00---------------------------------
.................................................TATGGCTTTTCATTCATG.......................................................................................................................................................................................181.000.00-1.00--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCTTT.....................................................................................................................................................................................2011.001.00-----1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................AGAATGAGGAGTGTGGTC..........................................................................1811.001.00-------1.00--------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCATC.....................................................................................................................................................................................201.000.00--1.00-------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCTTTA....................................................................................................................................................................................2111.001.00-----1.00----------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCTTAG......................................................................................................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------
..................................................ATGGCTTTTCATTCCCATG.....................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GAGGAGGTGGAGGCC....................................1501.001.00-------------------------------------------1.00--------------------------------------------------------
.............................................................................................................................................ACAGTGGCTGCAGCGTGAAT.........................................................................................2011.001.00-------------------------------------------------1.00--------------------------------------------------
.............................................................................................................................................ACAGTGGCTGCAGCGTGAGAATG......................................................................................2311.001.00----------------------------------------1.00-----------------------------------------------------------
..................................................ATGGCTTTTCATTCCCATA.....................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------
........................................................................................TATACTGATCTGTGGAATG...............................................................................................................................................1911.001.00------------------------------------1.00---------------------------------------------------------------
..................................................................................................................................................................................TCACTGCTCTCCCTGCCCAT....................................................201.000.00----------------------1.00-----------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCTATT......................................................................................................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGAGGAGGTGGAGGCCCCTGAGGCGG..........................261.000.00----------1.00-----------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCTGA.....................................................................................................................................................................................201.000.00-------------1.00--------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCATGG....................................................................................................................................................................................211.000.00--------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................ACAGTGGCTGCAGCGTGA...........................................................................................1811.001.00-----------------------------------------------------------1.00----------------------------------------
..................................................................................................................................................................................TCACTGCTCTCCCTGCCCACAGA.................................................2311.001.00------------------------------------------------------1.00---------------------------------------------
...............................................................................................................................................AGTGGCTGCAGCGTGAGAATGAGGTAA................................................................................2711.002.00-------------------1.00--------------------------------------------------------------------------------
....................................................................................................................................................................................................................CCCCTGAGGTGGAGCCTTGC..................201.000.00----------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................ACAGTGGCTGCAGCGTGAGAAT.......................................................................................2211.001.00------1.00---------------------------------------------------------------------------------------------
..................................TGGCTGGTTTCTTTTTTTTA....................................................................................................................................................................................................201.000.00----------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................................................TCACTGCTCTCCCTGCCCACA...................................................2111.001.00-----------------------------------------------------1.00----------------------------------------------
.................................................TATGGCTTTTCATTCCCATTG....................................................................................................................................................................................211.000.00---------1.00------------------------------------------------------------------------------------------
..............................................................................................................................................CAGTGGCTGCAGCGTGAGAA........................................................................................2011.001.00----------------1.00-----------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCTGTGA...................................................................................................................................................................................221.000.00-------------------------------------------------------1.00--------------------------------------------
.................................................TATGGCTTTTCATTCTATA......................................................................................................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCGTG.....................................................................................................................................................................................201.000.001.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................ACAGTGGCTGCAGCGTGAGAAA.......................................................................................221.000.00-------------------1.00--------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCATGA....................................................................................................................................................................................211.000.00---------------1.00------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCAATG......................................................................................................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCACTGCTCTCCCTGCCCACGA..................................................221.000.00--------------------------------1.00-------------------------------------------------------------------
........................................................................................TATACTGATCTGTGGAATGGGACTTCCCT.....................................................................................................................................2911.001.00--------------------------1.00-------------------------------------------------------------------------
................................................................CCTTTCTACTGAACTCTG........................................................................................................................................................................181.000.00--------------------1.00-------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCCTTGT....................................................................................................................................................................................211.000.00---------------------1.00------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTCTT.....................................................................................................................................................................................2050.800.40--0.20--------------------------------------------0.20-----------------------------0.20------------------0.20---
.................................................TATGGCTTTTCATTCCTTTA.....................................................................................................................................................................................2050.600.40-0.40-----------0.20--------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCACTG.....................................................................................................................................................................................2050.600.40-0.60--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTTAG.....................................................................................................................................................................................2050.600.40-0.60--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTAA......................................................................................................................................................................................1950.400.40-0.40--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTGA......................................................................................................................................................................................1950.400.40--------------------------0.20---------------------------------------------------0.20---------------------
.................................................TATGGCTTTTCATTCCGATT.....................................................................................................................................................................................2050.400.40-----0.20----------------------------------------------------------------------------------------0.20-----
.................................................TATGGCTTTTCATTCCTG.......................................................................................................................................................................................1850.400.40-0.20-------------------------------------------------------------------------------------------0.20------
.................................................TATGGCTTTTCATTCCATAG.....................................................................................................................................................................................2050.400.40-0.40--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTCT......................................................................................................................................................................................1950.400.40-----------------------------------------------------------------------0.20-------------------0.20--------
.................................................TATGGCTTTTCATTCCTACT.....................................................................................................................................................................................2050.400.40-0.20-----------------------------------------------------------------0.20--------------------------------
.................................................TATGGCTTTTCATTCC.........................................................................................................................................................................................1650.400.40---------------------------------------------------------------------------0.20---------0.20--------------
.................................................TATGGCTTTTCATTCCTAC......................................................................................................................................................................................1950.400.40-----0.20-----------------------------------------0.20----------------------------------------------------
.................................................TATGGCTTTTCATTCCTCGG.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCAAT......................................................................................................................................................................................1950.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCA........................................................................................................................................................................................1750.200.40----------------------------------------------------------------------------------------0.20-----------
.................................................TATGGCTTTTCATTCCGAGT.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTAGA.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTACC.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCGTG......................................................................................................................................................................................1950.200.400.20---------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTTG......................................................................................................................................................................................1950.200.40-------------------------------------------------------------------------------0.20--------------------
.................................................TATGGCTTTTCATTCCAAG......................................................................................................................................................................................1950.200.40-------------------------------------------------------------------------------------------------0.20--
.................................................TATGGCTTTTCATTCCTCAG.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCGACG.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCAAGG.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTAGT.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCGATA.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTCTA.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTC.......................................................................................................................................................................................1850.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCGATC.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTGC......................................................................................................................................................................................1950.200.40----------------------------0.20-----------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCAT.......................................................................................................................................................................................1850.200.400.20---------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCGGTA.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCAGCG.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCATA......................................................................................................................................................................................1950.200.40---0.20------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTCCG.....................................................................................................................................................................................2050.200.40-0.20--------------------------------------------------------------------------------------------------
.................................................TATGGCTTTTCATTCCTGTT.....................................................................................................................................................................................2050.200.40---------------------------------------------------------------------------------0.20------------------
.................................................TATGGCTTTTCATTCCTGT......................................................................................................................................................................................1950.200.40---------------------------0.20------------------------------------------------------------------------

Antisense strand
CACAGGCCACCAGTTTCTGCCCCGGCCAGTTGCCTGGCTGGTTTCTTTTTATGGCTTTTCATTCCCTTTCTACTGAACTGGGCCAGAGTATACTGATCTGTGGAATGGGACTTCCCTCTCTCGGTACAAAGCATGTGGCCCACAGTGGCTGCAGCGTGAGAATGAGGAGTGTGGTCCCTCACTGCTCTCCCTGCCCACAGAGGAGGTGGAGGCCCCTGAGGTGGAGCCCCGCCTAGTGTACTGCTACCCA
.....................................................(((((((((((.........((.(((((((((.((.........)).)))...(((....)))...)))))).))..((.((..(((......)))..))))....)))))))))))................................................................................
............................................45...........................................................................................................................170..............................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782SRR189783SRR189785SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR191470(GSM715580)
118genomic small RNA (size selected RNA from . (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577739(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR191464(GSM715574)
112genomic small RNA (size selected RNA from . (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR191467(GSM715577)
115genomic small RNA (size selected RNA from . (breast)		SRR040031(GSM532916)
G013T. (cervix)		SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)		SRR038862(GSM458545)
MM472. (cell line)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR191435(GSM715545)
172genomic small RNA (size selected RNA from . (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040028(GSM532913)
G026N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)		SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)		SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040006(GSM532891)
G601N. (cervix)		TAX577579(Rovira)
total RNA. (breast)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		TAX577589(Rovira)
total RNA. (breast)		GSM532886(GSM532886)
G850T. (cervix)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR040027(GSM532912)
G220T. (cervix)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM532872(GSM532872)
G652T. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.....................................................................CTACTGAACTGGGCCAGAAC................................................................................................................................................................. 204.000.00------1.00---------------------1.001.00-----------------------------------1.00----------------------------------
.................................................................................................................................................TTCTCACGCTGCAGCCA........................................................................................ 1712.002.00------------------2.00---------------------------------------------------------------------------------
...................................GGCTGGTTTCTTTTTGGAC.................................................................................................................................................................................................... 191.000.00--------------------------------------1.00-------------------------------------------------------------
......................................................................................................................................................................................................AGAGGAGGTGGAGGCCCTCC................................ 201.000.00------------------------------------------1.00---------------------------------------------------------
...................................................................................................................................................CTCATTCTCACGCTGCAGC.................................................................................... 1911.001.00-------------------------------1.00--------------------------------------------------------------------
........................................................................................................................................................AGCGTGAGAATGAGGCG................................................................................. 171.000.00--------------------------------------------------------------1.00-------------------------------------
.....................................................................CTACTGAACTGGGCCAGAAT................................................................................................................................................................. 201.000.00---------------------------------1.00------------------------------------------------------------------
.....................................................................................................................................................................................CTGCTCTCCCTGCCCAC.................................................... 171.000.00---------------------------------------------------------1.00------------------------------------------
..................................................................................................................................GCCACTGTGGGCCACATGC..................................................................................................... 1911.001.00-------------------------------------1.00--------------------------------------------------------------
...........................................................AGTTCAGTAGAAAGGGAATG........................................................................................................................................................................... 2011.001.00------1.00---------------------------------------------------------------------------------------------
..................................................................................................................CACATGCTTTGTACCGAGAGAGG................................................................................................................. 2311.001.00---------------------------------------------------1.00------------------------------------------------
.....................................................................................................................................................................................................GGGGCCTCCACCTCCTCTG.................................. 1930.330.330.33---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GGCTCCACCTCAGGGG...................... 1680.120.12---------------------------------------------------------------------------------------------------0.12