| (1) AGO2.ip | (1) BRAIN | (8) BREAST | (9) CELL-LINE | (2) CERVIX | (2) HEART | (3) HELA | (3) LIVER | (1) OTHER | (3) SKIN | (1) UTERUS | (1) XRN.ip |
| TGCCTTCACTGGACACCTTCAAGGACCCCAGTCCTTTTGTCCCCAACAGTCAGGCCCCCCACTGACCTCAGACTCCCATCTCACCTAGCTAGATGGTTGTCAGATGCTATGAGGCCTTTGGGACCCTGGACCTGGTGGCAGGGGTGCAGTCAGGGTCAGGGATACCTCCTCTGCTCCCTGTCCTCCCCCTGCCACCCCAGATGATGGGAAGCTCTCATTTGAGGAATTCCAGAATTACTTTGCCGATGGG ......................................................................................................................................((((((((((......(((((.((((((....))).)))..))))).....))))))))))....................................................... ......................................................................................................................................135..............................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | TAX577588(Rovira) total RNA. (breast) | SRR189787 | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR189782 | SRR040008(GSM532893) G727N. (cervix) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191605(GSM715715) 76genomic small RNA (size selected RNA from t. (breast) | SRR189784 | SRR191485(GSM715595) 123genomic small RNA (size selected RNA from . (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | GSM532874(GSM532874) G699T. (cervix) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | TAX577740(Rovira) total RNA. (breast) | SRR189785 | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | DRR001483(DRX001037) "Hela long cytoplasmic cell fraction, control. (hela) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | TAX577579(Rovira) total RNA. (breast) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR191591(GSM715701) 53genomic small RNA (size selected RNA from t. (breast) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR191596(GSM715706) 73genomic small RNA (size selected RNA from t. (breast) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................CCTGGTGGCAGGGGTGCAGTCAGGGTCAGGGATACCTCCTCTGCTCCCTGTCCTCCCCCTGCCACCCCAG.................................................. | 70 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TCCCTGTCCTCCCCCTGCCACC...................................................... | 22 | 1 | 5.00 | 5.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................GCTCCCTGTCCTCCCCCCTC.......................................................... | 20 | 2 | 4.00 | 0.50 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................GCTCCCTGTCCTCCCCCC............................................................ | 18 | 2 | 3.00 | 0.50 | - | 1.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................AGGGGTGCAGTCAGGGTCAGGG......................................................................................... | 22 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TGTCCTCCCCCTGCCACCCCAGA................................................. | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................................GCTCCCTGTCCTCCCCCCTCC......................................................... | 21 | 2 | 3.00 | 0.50 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................GCTCCCTGTCCTCCCCCCT........................................................... | 19 | 2 | 3.00 | 0.50 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................................................AGGGGTGCAGTCAGGGTCAGGGA........................................................................................ | 23 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................CTCCCTGTCCTCCCCCCTCC......................................................... | 20 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................AGATGGTTGTCAGATGC............................................................................................................................................... | 17 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................CTCCCTGTCCTCCCCCCT........................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .......................................................CCCCCACTGACCTCATTG................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................TGGCAGGGGTGCAGTCAGGGTAT............................................................................................ | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TGTCCTCCCCCTGCCACCCCTTT................................................. | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ............................................................................................................................................................................GCTCCCTGTCCTCCCCCCGCC......................................................... | 21 | 2 | 1.00 | 0.50 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................CATTTGAGGAATTCCAGAATTACTTTGC....... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGGTGGCAGGGGTGCGCG.................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................CCTGGACCTGGTGGCAGAAGG......................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................AGATGCTATGAGGCCTTTGGGA............................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TGGCAGGGGTGCAGTCAGGGT.............................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGGTGGCAGGGGTGCAGTCAGT................................................................................................ | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................AGGGGTGCAGTCAGGGTCAGGGTCT...................................................................................... | 25 | 1 | 1.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................CTGGACCTGGTGGCAGATG.......................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................AGATGGTTGTCAGATGCT.............................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TCCCTGTCCTCCCCCTGCCA........................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................CTCCCTGTCCTCCCCCCC........................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TCCCTGTCCTCCCCCTGCCAAAA..................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGGTGGCAGGGGTGCAGTCAGGGTCAGG.......................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TCCCTGTCCTCCCCCTGCCACA...................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......ACTGGACACCTTCAAGGACCCC............................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TCCCTGTCCTCCCCCTGCCACCT..................................................... | 23 | 1 | 1.00 | 5.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TGAGGCCTTTGGGACCCTGGACCTGGTGGCAGGGGTGCAGTCAGGGTCAGGGATACCTCCTCTGCTCCCTGTCCTCCCCCTGCCACCC..................................................... | 88 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TTGAGGAATTCCAGAATTACTTTGC....... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................TGGCAGGGGTGCAGTCAGGGTCA............................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................GCTCCCTGTCCTCCCCC............................................................. | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGCCTTCACTGGACACCTTCAAGGACCCCAGTCCTTTTGTCCCCAACAGTCAGGCCCCCCACTGACCTCAGACTCCCATCTCACCTAGCTAGATGGTTGTCAGATGCTATGAGGCCTTTGGGACCCTGGACCTGGTGGCAGGGGTGCAGTCAGGGTCAGGGATACCTCCTCTGCTCCCTGTCCTCCCCCTGCCACCCCAGATGATGGGAAGCTCTCATTTGAGGAATTCCAGAATTACTTTGCCGATGGG ......................................................................................................................................((((((((((......(((((.((((((....))).)))..))))).....))))))))))....................................................... ......................................................................................................................................135..............................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | TAX577588(Rovira) total RNA. (breast) | SRR189787 | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR189782 | SRR040008(GSM532893) G727N. (cervix) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191605(GSM715715) 76genomic small RNA (size selected RNA from t. (breast) | SRR189784 | SRR191485(GSM715595) 123genomic small RNA (size selected RNA from . (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | GSM532874(GSM532874) G699T. (cervix) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | TAX577740(Rovira) total RNA. (breast) | SRR189785 | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | DRR001483(DRX001037) "Hela long cytoplasmic cell fraction, control. (hela) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | TAX577579(Rovira) total RNA. (breast) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR191591(GSM715701) 53genomic small RNA (size selected RNA from t. (breast) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR191596(GSM715706) 73genomic small RNA (size selected RNA from t. (breast) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................CAGACTCCCATCTCATAGC................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................CTCTGCTCCCTGTCCTCAGC.............................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................AAGCTCTCATTTGAGTAG........................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................GTCCTCCCCCTGCCACTT..................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................GACCCTGACTGCACCCCTGCCACC............................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................CTCCCCCTGCCACCCCATG................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .......................................................................................................................................................................................TCCCCCTGCCACCCCACGGG............................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......CACTGGACACCTTCATGAC................................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................CAGGCCCCCCACTGATGG...................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................GAGATGGGAGTCTGAG........................................................................................................................................................................ | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 |
| .........................ACAAAAGGACTGGGG.................................................................................................................................................................................................................. | 15 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |