ID: uc002wxs.2_intron_5_0_chr20_31017235_f
GENE: (6)
chr20:31017185-31017753+


(1)
AGO2.ip 		(11)
B-CELL 		(2)
BRAIN 		(6)
BREAST 		(24)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(5)
HELA 		(1)
KIDNEY 		(12)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(32)
SKIN 		(1)
TESTES 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
TGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATCAGGTATGTGTAAACTCATGGTTGTGATGCTTTTTCCTCAGGTCCTGGGGACCTGGCCTCCCTCTGTCAGCAGTTTCTGACCTAATAGTGCGATACTAGGAGAGCTGTCGGGCCACAGGCAAGAGCCCTGCCAATGGATGAGGCCTGCCATAGGTTCTAGTGCTGGGCTCTGCTGTGTGCCTTCCTCTTTGTCTCCCAGGGCAGTCGTGAGGATCCAACGGAGGATTTGATTATGCCAGTGCTTTGTAAAAGGTGTAGTGCTATACAAATAAAGATGGCAGTTTGGCACCTGTAAGGTGATATTTTAAAGCCAGACCATGAAGTGGTGGTTTCTCTCAGCCTAAGGCTGGGAGATGGAAGCATCCCAGTATTGCTGGCAGCATCTCAGGGAGAGCTGGGAGAAATGAGCTTGTCTGAGAGCCATGGGCGCGGCTTGGTGATACTTTTGACCAGTGGAATGCTGTGCCTTCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGC
................................................................................................................................................................................................................................................................................................................................................................................................((((....(((((((..((....)))))))))...((((((....(((((((..(((((..........))))).)))))))))))...))..))))........................................................................................
...............................................................................................................................................................................................................................................................................................................................................................................................384...............................................................................................482.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR189786SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
.................................CGTGGAATCTGCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................171303.00303.00226.0015.008.007.00-4.002.003.00-1.00-4.002.00-1.00-1.00---2.002.002.001.001.00-1.00---2.00-2.00----1.00--1.001.00----1.001.00-1.00-------1.00-1.00--1.00------1.00-1.00-1.00-----------1.00--1.00--1.00-----1.00------------
................................ACGTGGAATCTGCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181128.00128.0072.0010.007.002.00-1.003.001.00-2.00--2.00-1.00-1.00-1.00--1.00--1.002.001.00-2.001.00-1.00-1.00-----1.00--------1.00-1.00--1.00----------1.00--1.001.00---1.00-1.00--1.00-----1.00---1.00--------1.00-1.00--1.00--------
..................................GTGGAATCTGCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1655.005.00-0.20---0.40-0.40--------0.20---1.00--0.600.600.20-----------0.40-0.200.200.200.20----------------------------------------------------------------0.20--
.................................CGTGGAATCTGCATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.004.004.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGCTGGGAGATGGAA...................................................................................................................................................................1823.503.50----1.50--------1.00-----------------------------------------------------------------------------------------0.500.50-----
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCTGAGAGCCATGGGCGCG...........................................................................................2313.003.00--3.00-----------------------------------------------------------------------------------------------------------
.................................CGTGGAATCTGCATCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00303.00-----------------------------1.00-1.00--1.00---------------------------------------------------------------------------
.................................CGTGGAATCTGCATCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................173.000.002.00---------------1.00---------------------------------------------------------------------------------------------
...................GTAAACGGGGCCCACGTGGAACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................232.000.00---------------2.00----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCTGAGAGCCATGGGCGC............................................................................................2212.002.00--------------2.00-----------------------------------------------------------------------------------------------
.................................CGTGGAATCTGCATCAGAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00303.00--------2.00-----------------------------------------------------------------------------------------------------
.........................GGGGCCCACGTGGAATCTGCATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00--2.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................AAAGATGGCAGTTTGGCACCTGT.....................................................................................................................................................................................................................................2312.002.00-------------------2.00------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTGGCAGCATCTCAGGGAGAGCTGGGAG.........................................................................................................................3212.002.00----------2.00---------------------------------------------------------------------------------------------------
............................GCCCACGTGGAATCTGCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00-2.00------------------------------------------------------------------------------------------------------------
............................................................................................................................................TACTAGGAGAGCTGTCGGGCCAC......................................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00--2.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................GAGGATTTGATTATGCCAGTGC........................................................................................................................................................................................................................................................................................2212.002.00----2.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGCCGATGGCGAGAGCGGCAG.............2411.001.00--------------------------------------------------------------------------------------1.00-----------------------
.........................................................................................................................................CGATACTAGGAGAGCTGTCGGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------------------------------------------------------------------------------1.00-----------------------------
.............................................ATCAGGTATGTGTAAACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------1.00-------------------------------
.................................CGTGGAATCTGCATCAGGTATGTGTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00------------------------------------1.00-------------------------------------------------------------------------
....................TAAACGGGGCCCACGTGGAATCTGCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00---------1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................CGATACTAGGAGAGCTGTCGGGCCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00--------------------------------------1.00-----------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGCTGCCACGCCGATGGCGAGA....................2511.001.00---------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................TAAAAGGTGTAGTGCTATA.................................................................................................................................................................................................................................................................1911.001.00----1.00---------------------------------------------------------------------------------------------------------
................................ACGTGGAATCTGCATCAGAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00128.00--------1.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................GGCTGGGAGATGGAAGTA................................................................................................................................................................181.000.00------------------------------------------------------------------1.00-------------------------------------------
....................................................................................................................................................................................................................................TTCCTCTTTGTCTCCCAGGGCAG..............................................................................................................................................................................................................................................................................................................................2311.001.00----1.00---------------------------------------------------------------------------------------------------------
...................................................................................................................................................AGAGCTGTCGGGCCACAGGCAAGAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00---------------------------------1.00----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................CAGTTTGGCACCTGTAAGGT................................................................................................................................................................................................................................2011.001.00------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCTGCCACGCCGATGGCGAGA....................2411.001.00-------------------1.00------------------------------------------------------------------------------------------
...............................CACGTGGAATCTGCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------1.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGGCTGCCACGCCGATGGCGAG.....................2611.001.00------------------------------------------------------------------------------------------------------1.00-------
..........CCTCTGAAGGTAAACGGGGCCCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-------------1.00------------------------------------------------------------------------------------------------
.........................GGGGCCCACGTGGAATCTGCATCAGGTATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00---------------------------------------------1.00----------------------------------------------------------------
....CTGACTCCTCTGAAGGTAAACGGGGCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00------------------------------------------------------------------------------------------1.00-------------------
.......................................................................................................................................................................................................................................................GCAGTCGTGAGGATCCAACGGAA...........................................................................................................................................................................................................................................................................................................231.000.00-------------------------------------------------------1.00------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................AAGGCTGGGAGATGGAAGCATC..............................................................................................................................................................2211.001.00-----------------1.00--------------------------------------------------------------------------------------------
................................................................................................................................................AGGAGAGCTGTCGGGCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------1.00------------------------------
.......................ACGGGGCCCACGTGGAATCTGCATCAGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................301.000.00---------------1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGACCAGTGGAATGCT............................................................2011.001.00---------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................TGGATGAGGCCTGCCGGT..................................................................................................................................................................................................................................................................................................................................................................................181.000.00--------1.00-----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................AAGGCTGGGAGATGGAAGCAT...............................................................................................................................................................2111.001.00-----------------1.00--------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................AAGGCTGGGAGATGGATT..................................................................................................................................................................181.000.00-------------------------------------------1.00------------------------------------------------------------------
.......................................................................................................................................................................AAGAGCCCTGCCAATGGATGAGGCCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................291.000.00-----------------------------------1.00--------------------------------------------------------------------------
.............................................................................................................................................ACTAGGAGAGCTGTCGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------------------------1.00---------
.......................................................................................................................................................CTGTCGGGCCACAGGCAAGAGCCCTG........................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---------------------------------------------------------------------------------1.00----------------------------
................................ACGTGGAATCTGCATCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00128.00----------------------------------------------------------------------1.00---------------------------------------
...................................TGGAATCTGCATCAGGTATGTGTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--------------------------------------------------------1.00-----------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAGCTGGGAGAAAACA...................................................................................................................191.000.00---------------------------------------------------------------1.00----------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGAGAGCCATGGGCGCGGCC........................................................................................241.000.00----------1.00---------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCGGGCTGCCACGC...............................1811.001.00-----------------------------------------------------------------------------------------------1.00--------------
.................................CGTGGAATCTGCATCAGGTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00------------------------------------------------------1.00-------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................AAGGCTGGGAGATGGAAGC.................................................................................................................................................................1911.001.00-----------------1.00--------------------------------------------------------------------------------------------
...........................................................................................................................................ATACTAGGAGAGCTGTCGGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------------------------------1.00----------------
.........................................................................................................................................................................................................................................................AGTCGTGAGGATCCAACGGAGG..........................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------1.00------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGCATCCCAGTATTGTGT..................................................................................................................................................221.000.00------------------------------------------------------------1.00-------------------------------------------------
.................................CGTGGAATCTGCATCAGGTATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------1.00---------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGCATCCCAGTATTGGAG..................................................................................................................................................221.000.00-----------------------------------1.00--------------------------------------------------------------------------
.GTCCTGACTCCTCTGAAGGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------------------1.00---------------------------------------------------
.............................CCCACGTGGAATCTGCATCAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00-----------------------------------------------------------------------------------------1.00--------------------
................................ACGTGGAATCTGCATCAGGTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00---------------------------------------------------------------------------1.00----------------------------------
.................................................................................................................................................................ACAGGCAAGAGCCCTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................191.000.00----------------------------------1.00---------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGTAGTGCTATACAAATAAAGATGG....................................................................................................................................................................................................................................................2511.001.00------------------1.00-------------------------------------------------------------------------------------------
......................................................................................................................................................GCTGTCGGGCCACAGGCAAGAGCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00------------------------------------------------------------------------------------1.00-------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGCTGGGAGATGGAAGCATA..............................................................................................................................................................231.000.00-------------1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................AGGGCAGTCGTGAGGATCCAAC...............................................................................................................................................................................................................................................................................................................2211.001.00-------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................AAGGCTGGGAGATGGATTTT................................................................................................................................................................201.000.00--------------------------------------------------------------------------------------------1.00-----------------
................................ACGTGGAATCTGCATCAGGTATGTGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00----------------------------------------------------------------------------------------------1.00---------------
..........................................................................................................................................................................................................TCTAGTGCTGGGCTCTGCTGTGTGCCCTC..................................................................................................................................................................................................................................................................................................................................................291.000.00----------1.00---------------------------------------------------------------------------------------------------
...................................................................................................................................ATAGTGCGATACTAGGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------1.00---------------------------------------------------------
....CTGACTCCTCTGAAGGTAAACGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------------------1.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGACCAGTGGAATGC.............................................................1820.500.50------------------------------------0.50-------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................CTATACAAATAAAGATGGC...................................................................................................................................................................................................................................................1920.500.50---------------------------------------------------------------------------------------------------------0.50----
....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGCTGGGAGATGGAAA..................................................................................................................................................................1920.503.50----------------------------------------------------------------------------------------------------------0.50---
..................................................................................................................................................................................................................................................................................................................................................................................................CCTAAGGCTGGGAGATGG.....................................................................................................................................................................1830.330.33--------------------------------------0.33-----------------------------------------------------------------------
..................................................................................................................................................................................CAATGGATGAGGCCT........................................................................................................................................................................................................................................................................................................................................................................................1530.330.33---------------0.33----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................AAGGCTGGGAGATGGAATTT................................................................................................................................................................2060.170.17-------------------------------------------0.17------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................AAGGCTGGGAGATGGAA...................................................................................................................................................................1760.170.17------------------------------------------------------------------------------------------------------------0.17-
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGGGAGAGCTGGG...........................................................................................................................1670.140.14--------------------------------------------0.14-----------------------------------------------------------------
..................................GTGGAATCTGCATCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1580.120.12-------------------------------------------------------------------------------------------------------------0.12

Antisense strand
TGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATCAGGTATGTGTAAACTCATGGTTGTGATGCTTTTTCCTCAGGTCCTGGGGACCTGGCCTCCCTCTGTCAGCAGTTTCTGACCTAATAGTGCGATACTAGGAGAGCTGTCGGGCCACAGGCAAGAGCCCTGCCAATGGATGAGGCCTGCCATAGGTTCTAGTGCTGGGCTCTGCTGTGTGCCTTCCTCTTTGTCTCCCAGGGCAGTCGTGAGGATCCAACGGAGGATTTGATTATGCCAGTGCTTTGTAAAAGGTGTAGTGCTATACAAATAAAGATGGCAGTTTGGCACCTGTAAGGTGATATTTTAAAGCCAGACCATGAAGTGGTGGTTTCTCTCAGCCTAAGGCTGGGAGATGGAAGCATCCCAGTATTGCTGGCAGCATCTCAGGGAGAGCTGGGAGAAATGAGCTTGTCTGAGAGCCATGGGCGCGGCTTGGTGATACTTTTGACCAGTGGAATGCTGTGCCTTCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGC
................................................................................................................................................................................................................................................................................................................................................................................................((((....(((((((..((....)))))))))...((((((....(((((((..(((((..........))))).)))))))))))...))..))))........................................................................................
...............................................................................................................................................................................................................................................................................................................................................................................................384...............................................................................................482.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR189786SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
.............................................................................................................TCTGTCAGCAGTTTCTACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------1.00--------------------------------------------
...............................................................................................................................CCTAATAGTGCGATAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 161.000.00--------------------------------------------1.00-----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAGCCCGAGAACC.................................. 1611.001.00----------------------------------------------------------------------------------1.00---------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTCAGGGTTCTCGCG........................................ 181.000.00---------------------------------------------------------------------------------------------------1.00----------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGAGCGGCAGCCGGC........ 181.000.001.00-------------------------------------------------------------------------------------------------------------
............................................................................AGGACCTGAGGAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 1711.001.00-1.00------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................CAAGAGCCCTGCCAAGTT................................................................................................................................................................................................................................................................................................................................................................................................. 181.000.00----------------------------------------------------------------------------1.00---------------------------------