ID: uc002wwp.1_intron_9_0_chr20_30366788_f.5p
GENE: TPX2(10)
chr20:30366738-30366987+


(1)
AGO2.ip 		(8)
B-CELL 		(2)
BREAST 		(13)
CELL-LINE 		(2)
CERVIX 		(1)
HEART 		(1)
HELA 		(6)
LIVER 		(2)
OTHER 		(3)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TAAACGAACCCCTAACAGATATCATTTGAGGAGCAAGAAGGATGATATTAGTAAGTTTCCTACCAGTATCACAGTTGGATGGAACCTCTCCTACATTCCCTCTGCTTACATCTTAGGCACAGATTTGTCTTTAGCTGAAATCCTAGTTTTTCAATTAAAGTATGGCGTGTGACTATGCAGACAACAAATGTATCCTTCAGAATTTTTCAAACCACCCAGCTGTCTGTCTTATACCCATCAACCGTCTTGA
.................................................................(((...(((..(((.(((.....))).....)))..)))..))).((((((.((((..((...((((((.(((((........))))).))))))...))..)))).)))...))).....................................................................
.................................................................66.....................................................................................................................185...............................................................
SizePerfect hitTotal NormPerfect NormSRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040037(GSM532922)
G243T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
..................................................................................................................................................................TGGCGTGTGACTATGGTGT.....................................................................1934.000.0011.008.00-8.005.00--------2.00--------------------------
............................AGGAGCAAGAAGGATGATA...........................................................................................................................................................................................................1919.009.00-------4.001.002.00----------1.00----------------1.00--
..................................................................................................................................................................TGGCGTGTGACTATGGAGT.....................................................................195.000.001.003.00-1.00------------------------------------
..................................................................................................................................................................TGGCGTGTGACTATGGTG......................................................................184.000.001.002.00--1.00-----------------------------------
...........................GAGGAGCAAGAAGGATGAT............................................................................................................................................................................................................1914.004.00--1.00-----1.00-----2.00-------------------------
......................................................................ACAGTTGGATGGAACCTCTG................................................................................................................................................................204.000.00-----------3.00-------------1.00--------------
..................................................................................................................................................................TGGCGTGTGACTATGGTTT.....................................................................193.000.00-1.00-2.00------------------------------------
........................TTTGAGGAGCAAGAAGGATGA.............................................................................................................................................................................................................2113.003.00--2.00-----------------------------1.00-------
............................AGGAGCAAGAAGGATGATATT.........................................................................................................................................................................................................2113.003.00--1.00-1.00---1.00-------------------------------
..........................TGAGGAGCAAGAAGGATGATATTAA.......................................................................................................................................................................................................253.000.00--3.00-------------------------------------
..........................TGAGGAGCAAGAAGGATGAT............................................................................................................................................................................................................2012.002.00---------------------1.00--------------1.00---
................................GCAAGAAGGATGATATTA........................................................................................................................................................................................................1812.002.00---------------1.00-----------------1.00------
............................AGGAGCAAGAAGGATGATATTA........................................................................................................................................................................................................2212.002.00------------------------1.00----------1.00----
.............................GGAGCAAGAAGGATGATA...........................................................................................................................................................................................................1812.002.00-----2.00----------------------------------
...........................GAGGAGCAAGAAGGATGATATT.........................................................................................................................................................................................................2212.002.00--1.00--1.00----------------------------------
.......................ATTTGAGGAGCAAGAAGGAT...............................................................................................................................................................................................................2012.002.00------------2.00---------------------------
............................AGGAGCAAGAAGGATGAT............................................................................................................................................................................................................1812.002.00--------2.00-------------------------------
..............ACAGATATCATTTGAGGAGCAAGAAGGATGAC............................................................................................................................................................................................................321.000.00-------------------------------1.00--------
..................................................................................................................................................................TGGCGTGTGACTATGGAG......................................................................181.000.001.00---------------------------------------
.............................GGAGCAAGAAGGATGATATT.........................................................................................................................................................................................................2011.001.00---------1.00------------------------------
........................TTTGAGGAGCAAGAAGGATGAT............................................................................................................................................................................................................2211.001.00-----1.00----------------------------------
............................AGGAGCAAGAAGGATGATT...........................................................................................................................................................................................................1911.002.00--1.00-------------------------------------
..................................................................................................................................................................TGGCGTGTGACTATGCAGCTA...................................................................211.000.00----1.00-----------------------------------
....................................................................................................................................AGCTGAAATCCTAGTTTTTCAA................................................................................................2211.001.00-----------------------1.00----------------
.................GATATCATTTGAGGAGCAAGAAGGAT...............................................................................................................................................................................................................2611.001.00---------------1.00------------------------
........................TTTGAGGAGCAAGAAGGATG..............................................................................................................................................................................................................2011.001.00----------------------------1.00-----------
...........................GAGGAGCAAGAAGGATGATATTA........................................................................................................................................................................................................2311.001.00--1.00-------------------------------------
..................................................................................................................................................................TGGCGTGTGACTATGGTAA.....................................................................191.000.00-1.00--------------------------------------
............................AGGAGCAAGAAGGATGATAT..........................................................................................................................................................................................................2011.001.00---------1.00------------------------------
..................................................................TATCACAGTTGGATGGAACCTCTG................................................................................................................................................................241.000.00-----------------1.00----------------------
..........................TGAGGAGCAAGAAGGATGA.............................................................................................................................................................................................................1911.001.00-----1.00----------------------------------
.................GATATCATTTGAGGAGCAAGA....................................................................................................................................................................................................................2111.001.00------------------1.00---------------------
.........................................................................................................................................................................................................ATTTTTCAAACCACCCG................................171.000.00----------------1.00-----------------------
...........................GAGGAGCAAGAAGGATGA.............................................................................................................................................................................................................1811.001.00----------------------1.00-----------------
.........................TTGAGGAGCAAGAAGGATGA.............................................................................................................................................................................................................2011.001.00------------------------------1.00---------
..................................................................................................................................................................TGGCGTGTGACTATGCAGCC....................................................................201.000.001.00---------------------------------------
............................AGGAGCAAGAAGGATGATATTAT.......................................................................................................................................................................................................2311.002.00-------1.00--------------------------------
............................AGGAGCAAGAAGGATGATTT..........................................................................................................................................................................................................2011.002.00-----1.00----------------------------------
...................TATCATTTGAGGAGCAAGA....................................................................................................................................................................................................................1911.001.00----------------------------------1.00-----
..........................TGAGGAGCAAGAAGGATGATT...........................................................................................................................................................................................................2111.002.00--1.00-------------------------------------
..................................................................................................................................................................TGGCGTGTGACTATGGTGA.....................................................................191.000.00-----------------------------1.00----------
..................................................................................................................................................................TGGCGTGTGACTATGGTAT.....................................................................191.000.001.00---------------------------------------
.............................GGAGCAAGAAGGATGATATA.........................................................................................................................................................................................................201.000.00---------1.00------------------------------
................AGATATCATTTGAGGAGCAAGAAGGACG..............................................................................................................................................................................................................281.000.00--------------------------------------1.00-
..................................................................................................................................................................TGGCGTGTGACTATGGTGC.....................................................................191.000.001.00---------------------------------------
......................CATTTGAGGAGCAAGAAGGATGA.............................................................................................................................................................................................................2311.001.00---------------------------1.00------------
...........................GAGGAGCAAGAAGGATGATAT..........................................................................................................................................................................................................2111.001.00--------------------------1.00-------------
..........................TGAGGAGCAAGAAGGATG..............................................................................................................................................................................................................1820.500.50--0.50-------------------------------------
.......................................................................CAGTTGGATGGAACC....................................................................................................................................................................1580.120.12---------------------------------------0.12

Antisense strand
TAAACGAACCCCTAACAGATATCATTTGAGGAGCAAGAAGGATGATATTAGTAAGTTTCCTACCAGTATCACAGTTGGATGGAACCTCTCCTACATTCCCTCTGCTTACATCTTAGGCACAGATTTGTCTTTAGCTGAAATCCTAGTTTTTCAATTAAAGTATGGCGTGTGACTATGCAGACAACAAATGTATCCTTCAGAATTTTTCAAACCACCCAGCTGTCTGTCTTATACCCATCAACCGTCTTGA
.................................................................(((...(((..(((.(((.....))).....)))..)))..))).((((((.((((..((...((((((.(((((........))))).))))))...))..)))).)))...))).....................................................................
.................................................................66.....................................................................................................................185...............................................................
SizePerfect hitTotal NormPerfect NormSRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040037(GSM532922)
G243T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
........................................................................................................................................GAAATCCTAGTTTTTTCT................................................................................................ 185.000.00----------5.00-----------------------------
...............................................................................................................................TCTTTAGCTGAAATCATC......................................................................................................... 185.000.00------5.00---------------------------------
........................................................................................................................................GAAATCCTAGTTTTTTCTT............................................................................................... 191.000.00-------------------1.00--------------------