ID: uc002wqj.2_intron_0_0_chr20_18118696_f.5p
GENE: (1)
chr20:18118646-18118895+


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(5)
B-CELL
(3)
BRAIN
(17)
BREAST
(25)
CELL-LINE
(19)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(4)
HELA
(5)
LIVER
(2)
OTHER
(56)
SKIN

Sense strand
CGGCGGCCACAGTGGCCGGCGTACATGTGAAGCAGCAGTGGGACCAGCAGGTCGGTGTCACGTGACCGTCTCTTCCGGGCCCGCGCGCGCGGCGTCGACCTGGGGCCTCTCGTGGTCTCTGCCCGCTCGGTTCCTCAGCTCCTCTTCGTGTCTTTCCCCCGCGGTGGCGCGGCCCTGCACCCCACGCGTTTGCGGCTGCGGCCGGCGGCCGCTCTGCTGGGCTCCGGGCGCTGCAGCTCCCGGCGGGCGT
...............................................................................................................((((...((((((((((((.......((........)).........))).))))).))))..))))........................................................................
..............................................................................................................111.................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormGSM532877(GSM532877)
G691N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM532881(GSM532881)
G696N. (cervix)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
TAX577739(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR040024(GSM532909)
G613N. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR189783SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040021(GSM532906)
G761T_2. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)
GSM532880(GSM532880)
G659T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)
SRR040036(GSM532921)
G243N. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040031(GSM532916)
G013T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532887(GSM532887)
G761N. (cervix)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR040042(GSM532927)
G428N. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM532879(GSM532879)
G659N. (cervix)
TAX577453(Rovira)
total RNA. (breast)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCGG...........................................................................2081.000.0014.0015.00-3.001.003.005.00--2.00--1.00-1.00-2.003.00-2.001.002.00-1.00-1.00-2.00--2.00-1.002.001.001.00-1.001.00--1.001.002.00--2.00-1.00-----1.00---------1.00----1.00---1.00---------------------------1.00----------1.00-------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCGG...........................................................................19248.000.5011.000.50-1.001.000.501.00-6.001.00----1.502.50-0.50-0.50--1.500.50---0.500.500.50-0.500.500.50---0.50-1.00----1.001.50----------0.500.50-0.50-1.50----------1.00-----------------1.00---------0.50-------1.00---------0.50-0.50----0.500.50-0.50-0.500.50-0.50-0.50---0.500.50---
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCG............................................................................1932.000.0012.002.00-1.00-1.00----------1.00--1.001.00----2.00--1.00--1.00------1.001.00-1.00------1.00---------1.00---------------------1.00--1.00--------1.00----------------------1.00----------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCG............................................................................18224.500.5018.50------------0.50-0.50--------------0.50--------------0.50----------------0.50-------------------------0.50------1.00--------------------------0.500.500.50----0.50--------------
............................................................................................................................................................CCCCGCGGTGGCGCGCC.............................................................................1727.000.503.00----0.50---------0.50-------0.50-----------------------------------0.500.50---0.50----------------------------0.50--------------------------------------0.50-----------
...........................................................................................................................................................CCCCCGCGGTGGCGCGCC.............................................................................187.000.004.00-------------------1.00---------------------1.00-------1.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGC..............................................................................175.000.00---------1.00-----------1.00--------------------------------------------------------------1.00----------------------1.00------1.00-----------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCTG...........................................................................1925.000.502.00--------1.00------------0.50-------------------------------------0.50--0.50---------------------------------------------------------------0.50----------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCGT...........................................................................1924.500.503.50--------------------------------------------------------------0.50------------------------------------------------------------------------0.50-------
...........................................................................................................................................................CCCCCGCGGTGGCGC................................................................................1514.004.00----------------1.00--------------1.00----------------------1.00-------------1.00---------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCTG...........................................................................204.000.004.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................TCTCTGCCCGCTCGGTTCCTCAGAA..............................................................................................................254.000.00--------------------------3.00------------------------------------------------------------------------1.00--------------------------------------------
.....................................................................................................................TCTGCCCGCTCGGTTCCTCAGCA..............................................................................................................233.000.00-------3.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TCTGCCCGCTCGGTTCCTCAGT...............................................................................................................223.000.00--2.00-------1.00-------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................TCTCTGCCCGCTCGGTTCCTCAGC...............................................................................................................2413.003.00-------------------------------------------------1.00------------------------1.00-----------------------------------------1.00---------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGC..............................................................................1622.500.50-------------------------------------0.50--------------------0.500.50--------------------------------------------------------------------------0.50---0.50-----
...........................................................................................................................................................CCCCCGCGGTGGCGCTC..............................................................................1712.004.001.00----1.00------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................TCTCGTGGTCTCTGCCCG.............................................................................................................................1812.002.00-------------2.00----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCTCCG............................................................................1912.004.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------
.............................................AGCAGGTCGGTGTCACGTGAC........................................................................................................................................................................................2112.002.00-------2.00----------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCGC...........................................................................202.000.00---------------1.00----------------1.00---------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCT............................................................................192.000.002.00-----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................TCGTGGTCTCTGCCCGCTCGGT.......................................................................................................................2212.002.00-------1.00--------------------------1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCTCC.............................................................................1812.004.002.00-----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCCG...........................................................................1921.500.500.50------------------0.50-------------------------------------------0.50--------------------------------------------------------------------------------
...............................................................................CCCGCGCGCGCGGCGGGG.........................................................................................................................................................181.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................TCTCTGCCCGCTCGGTTCCTTT.................................................................................................................221.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGACA............................................................................1821.000.500.50---0.50-------------------------------------------------------------------------------------------------------------------------------------------
............................................CAGCAGGTCGGTGTCCT.............................................................................................................................................................................................171.000.00-----------------------------------------------------------------------------------------------------------------1.00------------------------------
.................................AGCAGTGGGACCAGCAGGTCGGT..................................................................................................................................................................................................2311.001.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGACG............................................................................1821.000.501.00-----------------------------------------------------------------------------------------------------------------------------------------------
..............GCCGGCGTACATGTGAAGCAG.......................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------------------------------1.00------------------------
.....................................................................................................................................................................................................GCGGCCGGCGGCCGCTCCGA.................................201.000.00----------------------------------------------------------------------------------1.00-------------------------------------------------------------
..........................................................................CCGGGCCCGCGCGCGCGGCTCC..........................................................................................................................................................221.000.00-------------------------------------------------------------------1.00----------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCAG...........................................................................1921.000.50------------0.50---------------------------------------------------------------------------------------0.50-------------------------------------------
............................GAAGCAGCAGTGGGACCA............................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------------------------1.00----------------------------------------------
..........................GTGAAGCAGCAGTGGGACCA............................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------------------------------1.00----------------------------------
.............................................................................GGCCCGCGCGCGCGGGA............................................................................................................................................................171.000.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................CACGCGTTTGCGGCTGCGGC................................................2011.001.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................GCAGGTCGGTGTCACGTGACCG......................................................................................................................................................................................2211.001.00---------------------------------------------------------------------------1.00--------------------------------------------------------------------
...........................................................................CGGGCCCGCGCGCGCGGG.............................................................................................................................................................181.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TCCCCCGCGGTGGCGCGCGGG...........................................................................2111.001.00-------------------------------------------------------------------------------------------------------1.00----------------------------------------
..............................AGCAGCAGTGGGACCAGCAGGT......................................................................................................................................................................................................2211.001.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCC............................................................................191.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
...............CCGGCGTACATGTGAAGCA........................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------------------1.00-----------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCCG...........................................................................201.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................GGGCCTCTCGTGGTCTCTGT................................................................................................................................201.000.00-----------------------------------------------------------------------------------------1.00------------------------------------------------------
...............................................................................................................GTGGTCTCTGCCCGCTCGGG.......................................................................................................................201.000.00----------------------------------------------------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................GCGGCTGCGGCCGGCGCCTG.......................................201.000.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGA..............................................................................171.000.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------
....................GTACATGTGAAGCAGCAGTGGGACCAGCAG........................................................................................................................................................................................................3011.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCAG............................................................................1821.000.501.00-----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TTCCTCAGCTCCTCTCAG......................................................................................................181.000.00--------------------------------------------------------------------------------------------------------1.00---------------------------------------
..................................................GTCGGTGTCACGTGACCGTCTCTTCCGGGCCC........................................................................................................................................................................3211.001.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TCTGCCCGCTCGGTTCCTCCGT...............................................................................................................221.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................TCTCGTGGTCTCTGCCCGCTCGGTA......................................................................................................................251.000.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCCT...........................................................................201.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................TGTGAAGCAGCAGTGGGACCA............................................................................................................................................................................................................2111.001.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------
.................................................................................................................................................................................................GGCTGCGGCCGGCGGGTTG......................................191.000.00----------------------------------------------------------------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGGG.............................................................................181.000.00---------------------------------------------------------------------------------------------------------------------1.00--------------------------
...............................................................................................................GTGGTCTCTGCCCGCTCGGT.......................................................................................................................2011.001.00----------------------------------------------------1.00-------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCTGG...........................................................................1921.000.500.50----------------0.50------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCTCTTCGTGTCTTTCCCCCGCGGTGGC..................................................................................2811.001.00-------------------------------------------------------------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................TCCCCCGCGGTGGCGC................................................................................1611.001.00--------------------------------------------1.00---------------------------------------------------------------------------------------------------
........................ATGTGAAGCAGCAGTGGG................................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------------------------------1.00---------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGAC.............................................................................181.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TCCCCCGCGGTGGCGCGCAGG...........................................................................2111.001.00---------------------------------------------------------------------------------------------------------1.00--------------------------------------
..........................................................................................................................................................TCCCCCGCGGTGGCGCGCCGG...........................................................................2111.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCC............................................................................1821.000.501.00-----------------------------------------------------------------------------------------------------------------------------------------------
....GGCCACAGTGGCCGGCGTACATGTGAAGCAGCA.....................................................................................................................................................................................................................3311.001.00---------------------------------------------------------------------------------------------------------------1.00--------------------------------
..........................................................................................................................................................TCCCCCGCGGTGGCGCGCC.............................................................................1911.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................CCGGGCCCGCGCGCGCGGG.............................................................................................................................................................191.000.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCCCCG............................................................................1911.004.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
.......................CATGTGAAGCAGCAGTGGGACCA............................................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------------------------1.00---------------------------------
..........................................................................................................................................................TCCCCCGCGGTGGCGCG...............................................................................1711.001.00-------------------------------------------------------1.00----------------------------------------------------------------------------------------
...................CGTACATGTGAAGCAGCAGTGGGACC.............................................................................................................................................................................................................2611.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCCA...........................................................................201.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCT............................................................................1821.000.501.00-----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CCCGCGGTGGCGCGGCCCTGCACCCC...................................................................2611.001.00--------------------------------------------------------------------------------------1.00---------------------------------------------------------
.................GGCGTACATGTGAAGCAGCAGTGGGACC.............................................................................................................................................................................................................2811.001.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------
......................ACATGTGAAGCAGCAGTGGGACCAG...........................................................................................................................................................................................................2511.001.00----------------------------------------------------------------------------------------------1.00-------------------------------------------------
...........................................................................................................................................................CCCCCGCGGTGGCGCGCCGT...........................................................................201.000.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TCCCCCGCGGTGGCGCGCCGT...........................................................................2111.001.00-------------------------------------------------1.00----------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCG...............................................................................1520.500.50----------------------------------------------------------------------------------------------------------------------0.50-------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGAC.............................................................................1720.500.50---------------------------------------------------------------------------------------------0.50--------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCGC...........................................................................1920.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGTCC............................................................................1820.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCTG............................................................................1820.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCGGG...........................................................................1920.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCG.............................................................................1720.500.50------------------------------------------------------------0.50-----------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGTTGA...........................................................................1920.500.50-----------------------------------------------------------------------------------------------------------------------------------------0.50------
............................................................................................................................................................CCCCGCGGTGGCGCGTC.............................................................................1720.500.50----------------------------------------------------------------------------------------0.50-------------------------------------------------------
..........................................................................................................................................................TCCCCCGCGGTGGCG.................................................................................1520.500.50-------------------------------------------------------0.50----------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCA.............................................................................1720.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCCGCGGTGGCGCGCCA............................................................................1820.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................CCGGCGGCCGCTCTGC.................................1630.330.33----------------------------------------------------------------------------------------------------------------------------------------------0.33-
...........................................................................CGGGCCCGCGCGCGCGTT.............................................................................................................................................................1840.250.25-------------------------------------------------------------------0.25----------------------------------------------------------------------------
...........................................................................CGGGCCCGCGCGCGCG...............................................................................................................................................................1640.250.25----0.25-------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
CGGCGGCCACAGTGGCCGGCGTACATGTGAAGCAGCAGTGGGACCAGCAGGTCGGTGTCACGTGACCGTCTCTTCCGGGCCCGCGCGCGCGGCGTCGACCTGGGGCCTCTCGTGGTCTCTGCCCGCTCGGTTCCTCAGCTCCTCTTCGTGTCTTTCCCCCGCGGTGGCGCGGCCCTGCACCCCACGCGTTTGCGGCTGCGGCCGGCGGCCGCTCTGCTGGGCTCCGGGCGCTGCAGCTCCCGGCGGGCGT
...............................................................................................................((((...((((((((((((.......((........)).........))).))))).))))..))))........................................................................
..............................................................................................................111.................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormGSM532877(GSM532877)
G691N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM532881(GSM532881)
G696N. (cervix)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
TAX577739(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR040024(GSM532909)
G613N. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR189783SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040021(GSM532906)
G761T_2. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)
GSM532880(GSM532880)
G659T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)
SRR040036(GSM532921)
G243N. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040031(GSM532916)
G013T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532887(GSM532887)
G761N. (cervix)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR040042(GSM532927)
G428N. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM532879(GSM532879)
G659N. (cervix)
TAX577453(Rovira)
total RNA. (breast)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
...............................................................................CCCGCGCGCGCGGCGAGGG........................................................................................................................................................ 1919.000.00--6.003.00--------1.00-----4.00-1.00-------1.00-----------2.00-------------------------------------------------------------1.00-----------------------------------------
.........ACATGTACGCCGGCCACTG.............................................................................................................................................................................................................................. 1915.005.00-----------5.00------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GCTCCTCTTCGTGTCTTTGC............................................................................................. 205.000.00----------5.00-------------------------------------------------------------------------------------------------------------------------------------
..........................................................................CCGGGCCCGCGCGCGGGG.............................................................................................................................................................. 185.000.00--------------------------------------------------1.00--------------------------1.001.001.00-----------1.00----------------------------------------------------
...............................................................................CCCGCGCGCGCGGCGAGG......................................................................................................................................................... 183.000.00--2.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................CGAGAGGCCCCAGGT.......................................................................................................................................... 1551.401.40-----------------------------------------------------------------1.40------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CTGCTGGGCTCCGGGCGCGCC................ 211.000.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.........................................................................TCCGGGCCCGCGCGCTGGA.............................................................................................................................................................. 191.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GCCCGCGCGCGCGGCGGGGC........................................................................................................................................................ 201.000.00------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.........................................................................TCCGGGCCCGCGCGCCTGG.............................................................................................................................................................. 191.000.00---------------------------------------------------------------------------------------1.00--------------------------------------------------------
..................................................................................................................GTCTCTGCCCGCTCGGTTC..................................................................................................................... 191.000.00---------------------------------------------------------1.00--------------------------------------------------------------------------------------
............................................................................GGGCCCGCGCGCGCGGCGGG.......................................................................................................................................................... 201.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................CCGGGCCCGCGCGCGCGGG............................................................................................................................................................. 191.000.00-----------------------1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................CCCGCGCGCGCGGCGA........................................................................................................................................................... 161.000.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------
.................................................................................CGCGCGCGCGGCGTCCGCC...................................................................................................................................................... 191.000.00--------------------------------------------------------------1.00---------------------------------------------------------------------------------
.............................................................................................................TCGTGGTCTCTGCCCGCTCGAAA...................................................................................................................... 231.000.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------
................................................................................................................AACCGAGCGGGCAGAGACCA...................................................................................................................... 2011.001.00---------------------------------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................CCGGGCCCGCGCGCGGGGC............................................................................................................................................................. 191.000.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................CCGCGGTGGCGCGGCCG........................................................................... 171.000.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------
................................................................................................................................................................GCGGTGGCGCGGCCCTT......................................................................... 171.000.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CTGCTGGGCTCCGGGCGCCA................. 201.000.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................CCCGCGCGCGCGGCGAG.......................................................................................................................................................... 171.000.00----------------------------------------------------------------------------------------------------------1.00-------------------------------------
.................................................................................................................................GTTCCTCAGCTCCTCAAG....................................................................................................... 181.000.00----------------------------------------------------------------------------1.00-------------------------------------------------------------------
.....................................................................................................................................CTCAGCTCCTCTTCGCA.................................................................................................... 171.000.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------
.....................................................................................CGCGCGGCGTCGACCTGGTGAC............................................................................................................................................... 221.000.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------
...........................................................................GCGCGCGCGGGCCCG................................................................................................................................................................ 1560.500.50----0.33-------------------------------------------------------------0.17-----------------------------------------------------------------------------
...........................................................................................................................................................................................................................GGCTCCGGGCGCTGCTCGG............ 190.500.00-------------------------------------------------------------------------------------------------------------------------0.50----------------------
...........................................................................CGGGCCCGCGCGCGCCG.............................................................................................................................................................. 170.500.00----0.33-------------------------------------------------------------0.17-----------------------------------------------------------------------------
......................................................................................................................GGAACCGAGCGGGCAG.................................................................................................................... 1630.330.33----------------------------------0.33-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GCCGGGAGCTGCAGCGC...... 1730.330.33---------------------------------------------------------------------------------------------------------------------------------------------0.33--
...............................................................................................................................................................................................................AGCCCAGCAGAGCGGC........................... 1630.330.33-----------------------------------0.33------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GCAGCGCCCGGAGCC................ 1560.170.17-----------------------------------------------------------------------------------------------------------------------------------------------0.17
......................................................................................................................................ACGAAGAGGAGCTGA..................................................................................................... 1590.110.11---------------------0.11--------------------------------------------------------------------------------------------------------------------------