ID: uc002wqi.1_intron_1_0_chr20_18022368_r.5p
GENE: OVOL2(2)
chr20:18037101-18037350-


(2)
AGO2.ip
(1)
B-CELL
(4)
BRAIN
(8)
BREAST
(11)
CELL-LINE
(4)
CERVIX
(1)
HEART
(1)
LIVER
(4)
OTHER
(20)
SKIN

Sense strand
ATGGACACCTGGCGACCAAGCAGCGCCCGGTCGCCAGATCGAAAATCAAGGTACTGTGTCGACTCTGCCCCCGCCGCCACCTGCACCACGCCCTGGCGTCGGGCTCCCGAGGCCGGCGCCCCTCCCTGCCGCGCCCGCCTGCGCAACCCGGCACCCGCGCCCCGAGCGCGCCCGCCGCGCCGCTCCTGCACCTGCCCCTGGGCGGCGGCCAGGGCGCCTCGGCGCGTCCTCCCGCCCGCAGGGTAGCTGC
.................................................................................((((...(((...((.((((((....((((((.(((((...........))))).)))).))...)))))).)).)))....((((((((.....)))).)))).))))............................................................
..............................................................................79.............................................................................................................190..........................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191517(GSM715627)
75genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................................................................................................................CGCCCGCCGCGCCGCGGA................................................................1829.000.0019.005.00----2.00----1.00---------------------------------1.00----1.00---
........................................................................................................................................................................CGCCCGCCGCGCCGCGGAG...............................................................196.000.002.00-------1.001.001.00------1.00------------------------------------
...........................................................................................................................................................................CCGCCGCGCCGCTCCGCGC............................................................192.000.00-----------------------------1.00----1.00-------------------
............................................................................................................................................................GCGCCCCGAGCGCGCG..............................................................................162.000.001.00----------------------------------------------1.00------
............................................................................................................................................................GCGCCCCGAGCGCGCGG.............................................................................172.000.001.001.00----------------------------------------------------
..................................................................................................................................................CCCGGCACCCGCGCCGG.......................................................................................171.000.001.00-----------------------------------------------------
........................................................................................................................................................................CGCCCGCCGCGCCGCGTA................................................................181.000.00-1.00----------------------------------------------------
...................................................................................CACCACGCCCTGGCGAGCT....................................................................................................................................................191.000.00---1.00--------------------------------------------------
...........................................................................................................................................................CGCGCCCCGAGCGCGCGG.............................................................................181.000.00-1.00----------------------------------------------------
........................................................................................................................................................................CGCCCGCCGCGCCGCGACC...............................................................191.000.001.00-----------------------------------------------------
..................................CAGATCGAAAATCAAG........................................................................................................................................................................................................1611.001.00--------------1.00---------------------------------------
...........................................................................................................................................................CGCGCCCCGAGCGCGCG..............................................................................171.000.00-1.00----------------------------------------------------
...........................................................................................................................................................................CCGCCGCGCCGCTCCGCG.............................................................181.000.00--1.00---------------------------------------------------
...............................................................................................................................................................................................................................GCGTCCTCCCGCCCGGCGG........191.000.00----------------------------------------1.00-------------
..........................................AAATCAAGGTACTGTGTCGA............................................................................................................................................................................................2011.001.00-------------------------1.00----------------------------
...........................................................................................................................................................CGCGCCCCGAGCGCG................................................................................1511.001.00-----------------------------------1.00------------------
.....................................ATCGAAAATCAAGGTCTTG..................................................................................................................................................................................................191.000.00-----------1.00------------------------------------------
............................................................................................CTGGCGTCGGGCTCCGTG............................................................................................................................................181.000.00----------------------------1.00-------------------------
.......................................................................................................................................................................................TCCTGCACCTGCCCCGGCA................................................191.000.00-----------------------1.00------------------------------
..................................................................................................................................................CCCGGCACCCGCGCCGGGG.....................................................................................191.000.00-1.00----------------------------------------------------
.....................................ATCGAAAATCAAGGTACTG..................................................................................................................................................................................................1911.001.00---------------------------------------1.00--------------
..................................................................................................................GGCGCCCCTCCCTGCGGTG.....................................................................................................................191.000.00---------1.00--------------------------------------------
........................................................................................................................................................ACCCGCGCCCCGAGCTGGG...............................................................................191.000.00------------------------------1.00-----------------------
.........................................................................................................................................................................GCCCGCCGCGCCGCTC.................................................................1620.500.50-----------------------------------------------------0.50
...................................................................................................................................................................................................................................CCTCCCGCCCGCAGGG.......1620.500.50------------0.50-----------------------------------------
..........................................................................................................................................................................CCCGCCGCGCCGCTCC................................................................1650.200.20-0.20----------------------------------------------------
..............................................................................................................................................................................................................................CGCGTCCTCCCGCCC.............1550.200.200.20-----------------------------------------------------

Antisense strand
ATGGACACCTGGCGACCAAGCAGCGCCCGGTCGCCAGATCGAAAATCAAGGTACTGTGTCGACTCTGCCCCCGCCGCCACCTGCACCACGCCCTGGCGTCGGGCTCCCGAGGCCGGCGCCCCTCCCTGCCGCGCCCGCCTGCGCAACCCGGCACCCGCGCCCCGAGCGCGCCCGCCGCGCCGCTCCTGCACCTGCCCCTGGGCGGCGGCCAGGGCGCCTCGGCGCGTCCTCCCGCCCGCAGGGTAGCTGC
.................................................................................((((...(((...((.((((((....((((((.(((((...........))))).)))).))...)))))).)).)))....((((((((.....)))).)))).))))............................................................
..............................................................................79.............................................................................................................190..........................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191517(GSM715627)
75genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................TTCGATCTGGCGACCGGGC............................................................................................................................................................................................................... 1913.003.00-----1.00---------------------------1.00---------------1.00----
.........................TTCGATCTGGCGACCGGG............................................................................................................................................................................................................... 1813.003.00----2.00----------------1.00--------------------------------
.............................................................................................TGGCGTCGGGCTCCCAG............................................................................................................................................ 172.000.00---2.00--------------------------------------------------
..............................................................................................................................................................................................................................CGCGTCCTCCCGCCCGGG.......... 182.000.00------------------1.00------------------------1.00----------
...............................................................................................................................................................................................................................CCCTGCGGGCGGGAGGACGC....... 2012.002.00--2.00---------------------------------------------------
...........................................................................................................................................................................CCGCCGCGCCGCTCCTCG............................................................. 181.000.00------------------------------------------1.00-----------
........................TCGATCTGGCGACCGGGC................................................................................................................................................................................................................ 1811.001.00-----1.00------------------------------------------------
...............................................................................................GCGTCGGGCTCCCGAAG.......................................................................................................................................... 171.000.00-------1.00----------------------------------------------
.........................TTTTCGATCTGGCGACCGGG............................................................................................................................................................................................................. 2011.001.00------------------------1.00-----------------------------
.........................TGATTTTCGATCTGGCGACCGGG.......................................................................................................................................................................................................... 2311.001.00---------------------------1.00--------------------------
...............................................................TCTGCCCCCGCCGCCATGAG....................................................................................................................................................................... 201.000.00-------1.00----------------------------------------------
................................................................CTGCCCCCGCCGCCACCT........................................................................................................................................................................ 181.000.00-------------1.00----------------------------------------
.......................CTTGATTTTCGATCTGGCGACCGGGCG........................................................................................................................................................................................................ 2711.001.00------------------------------------1.00-----------------
..................................................................................................................................................CCCGGCACCCGCGCCCCGGC.................................................................................... 201.000.00-------------------1.00----------------------------------
...............................................................TCTGCCCCCGCCGCCACA......................................................................................................................................................................... 181.000.00--------1.00---------------------------------------------
...................GCAGCGCCCGGTCGCCGGGA................................................................................................................................................................................................................... 201.000.00--------------------------------1.00---------------------
............................ATTTTCGATCTGGCGACC............................................................................................................................................................................................................ 1811.001.00--------------------------1.00---------------------------
..........................................................................................................................AGGCGGGCGCGGCAGGGA.............................................................................................................. 1811.001.00---------------------------------------------------1.00--
...........................................................................................................................CCCTGCCGCGCCCGCCGG............................................................................................................. 181.000.00-------------------------------1.00----------------------
.................................TACCTTGATTTTCGATCTGG..................................................................................................................................................................................................... 2011.001.00------------1.00-----------------------------------------
........................TTTTCGATCTGGCGACCGGGC............................................................................................................................................................................................................. 2111.001.00----------------------------------------------1.00-------
................................................................CTGCCCCCGCCGCCACCG........................................................................................................................................................................ 181.000.00-----------------------------------------1.00------------
.......................TTCGATCTGGCGACCGGGCG............................................................................................................................................................................................................... 2011.001.00------------------------------------------------1.00-----
.....................TTTCGATCTGGCGACCGGGCGCT.............................................................................................................................................................................................................. 2311.001.00--------------------1.00---------------------------------
..........................................................................................................................TCCCTGCCGCGCCCGACA.............................................................................................................. 181.000.00--------------------------------------------1.00---------
..............................................................................................................................................................................................................................CGCGTCCTCCCGCCCGCGGGA....... 211.000.00----------------------------------------------------1.00-
...............................................................TCTGCCCCCGCCGCCAG.......................................................................................................................................................................... 171.000.00----------------------1.00-------------------------------
.....GCTGCTTGGTCGCCAGGTG.................................................................................................................................................................................................................................. 1911.001.00----------------1.00-------------------------------------
...................GCAGCGCCCGGTCGCCGGG.................................................................................................................................................................................................................... 191.000.00----------1.00-------------------------------------------
..........................................................................................................................................................................CCCGCCGCGCCGCTCCAC.............................................................. 1851.000.00-------------------------------------1.00----------------
..............................................................CTCTGCCCCCGCCGCCGGG......................................................................................................................................................................... 191.000.00---------------1.00--------------------------------------
............................................................................................................................................................................................................................CGGGCGGGAGGACGCGCC............ 1820.500.50-------------0.50----------------------------------------
.......................................................................................................................................................................................CAGGGGCAGGTGCAGGA.................................................. 1780.120.12--------------0.12---------------------------------------