| (1) BRAIN | (9) CELL-LINE | (1) HEART | (2) HELA | (1) OTHER | (4) SKIN | (1) XRN.ip |
| AGGAAACTATTGGAAAGTTTTTCCAAGCTGACATTGCAGAAAATGCTTTGGTAGGTAGCTTTTTAATACTGTTGGTTTCTAATCTCGTGATGTGTTTTCTCATATTTTATTTCTTTATTTTTATTTCCTTCAAACTAGCTTTCTTTTCTGACACATGAAAAGGAACTCATACAGGAAATATCAAGAACAAAGGAAAAATCACCCCTATCACCCCTAGTCCTACCATTCAGAGGCAACCATTGGTGGCACT ...................................................((((.((((.............)))))))).......((((((......))))))................................................................................................................................................ ..................................................51.......................................................................124............................................................................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189782 | SRR444056(SRX128904) Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR029124(GSM416753) HeLa. (hela) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037937(GSM510475) 293cand2. (cell line) | DRR001483(DRX001037) "Hela long cytoplasmic cell fraction, control. (hela) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................CATATTTTATTTCTTTCTCA.................................................................................................................................. | 20 | 35.00 | 0.00 | 22.00 | 12.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................TTTCTTTATTTTTATTTCCTTCAAACTAG................................................................................................................ | 29 | 1 | 4.00 | 4.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................AGCTTTTTAATACTGAGT................................................................................................................................................................................ | 18 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | |
| .......................................................................................................ATTTTATTTCTTTATTTTAG............................................................................................................................... | 20 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................ATTTCTTTATTTTTATTTCCTTCAAACTAG................................................................................................................ | 30 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAGGTAGCTTTTTAATA...................................................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAGGTAGCTTTTTAATACTGTTGGTTTCTAATC...................................................................................................................................................................... | 33 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TACAGGAAATATCAAGAACAAA........................................................... | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAGGTAGCTTTTTAATACTGTTGGTTTCTA......................................................................................................................................................................... | 31 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................ATTTTATTTCTTTATTTTTAG.............................................................................................................................. | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................TTTTATTTCTTTATTTTTATTCATT......................................................................................................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................ATTTTATTTCTTTATTTTTCG.............................................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................AGGAAATATCAAGAACAAAGGAAAA..................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................TTTCTTTATTTTTATTTCCTTCAAACTAA................................................................................................................ | 29 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................TATTTCTTTATTTTTATACCC.......................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ........................AAGCTGACATTGCAGAACTGT............................................................................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................TTTTATTTCCTTCAAACCA................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................TATTTTATTTCTTTATTTTTCTTG............................................................................................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................CTTTATTTTTATTTCCTTCAAACTAG................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TTTCTCATATTTTATTTCTTTATTTTTATTT............................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TTTTATTTCTTTATTTTTATTCT........................................................................................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................TTTATTTCTTTATTTTTATTTCCTTCAAACTAG................................................................................................................ | 33 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TATTTTATTTCTTTATTTTTCG.............................................................................................................................. | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................ATTTTATTTCTTTATTTATTG.............................................................................................................................. | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................CGTGATGTGTTTTCTGC.................................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................TTATTTCTTTATTTTTATTTCCTTCAAACTAG................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TTTTCTCATATTTTATTAG......................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................ATTTTATTTCTTTATTTTTATTTTCTG........................................................................................................................ | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................ATTTTATTTCTTTATTCTGA............................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................ATTTTATTTCTTTATTTTTACAAG........................................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................ATTTTTATTTCCTTCAAACTAG................................................................................................................ | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................CATATTTTATTTCTTTCCCA.................................................................................................................................. | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................AATACTGTTGGTTTCTA......................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................ATTTTATTTCTTTATTTTTATTTCCT......................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................CTCATATTTTATTTCTTATAT................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................TCATATTTTATTTCTTCAAG................................................................................................................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................ATTTCCTTCAAACTAG................................................................................................................ | 16 | 3 | 0.33 | 0.33 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................AATGCTTTGGTAGGT.................................................................................................................................................................................................. | 15 | 9 | 0.11 | 0.11 | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGGAAACTATTGGAAAGTTTTTCCAAGCTGACATTGCAGAAAATGCTTTGGTAGGTAGCTTTTTAATACTGTTGGTTTCTAATCTCGTGATGTGTTTTCTCATATTTTATTTCTTTATTTTTATTTCCTTCAAACTAGCTTTCTTTTCTGACACATGAAAAGGAACTCATACAGGAAATATCAAGAACAAAGGAAAAATCACCCCTATCACCCCTAGTCCTACCATTCAGAGGCAACCATTGGTGGCACT ...................................................((((.((((.............)))))))).......((((((......))))))................................................................................................................................................ ..................................................51.......................................................................124............................................................................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189782 | SRR444056(SRX128904) Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR029124(GSM416753) HeLa. (hela) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037937(GSM510475) 293cand2. (cell line) | DRR001483(DRX001037) "Hela long cytoplasmic cell fraction, control. (hela) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................................ACCATTCAGAGGCAAGATT.......... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ....................................CAGAAAATGCTTTGGTTTC................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |