ID: uc002wnt.1_intron_4_0_chr20_10401407_r.3p
GENE: MKKS(1)
chr20:10401357-10401606-


(2)
B-CELL 		(1)
BRAIN 		(2)
BREAST 		(9)
CELL-LINE 		(3)
CERVIX 		(3)
HEART 		(1)
KIDNEY 		(1)
LIVER 		(2)
OTHER 		(16)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CAAGGCTGACTGCCTGCTCCCTTTGGGTCAATGACATGTCTCTTTTTGTTTATTAACATTGCAATGTATTATAATTTAAAATGTTTAACAGTCAGCATTTGTTAGAGTACAGCATGCTACTTGTAGTGATTTAGAAATGTAATTAAAGGGAGGTTATGGGTTTTAGTGGTTTTTTTCCTCTAACTGTAACCTTTTCTTAGGTACACTGATGCTGAAGTACTATGAGCCTTCGGAACTTGTGGAGAGACTA
...............................................................................................................................................(((..(((((((((((...((((.((.......)).)))))))))))))))..)))...................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189783SRR040042(GSM532927)
G428N. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189785SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040043(GSM532928)
G428T. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335
..................................................................................................................................................................................TCTAACTGTAACCTTTTCTTAG..................................................22128.0028.0014.00-5.00--1.00-1.00----------1.001.00--1.001.001.001.00-----------------1.00--
...................................................................................................................................................................................................................................CTTCGGAACTTGTGGAGAG....1916.006.00-6.00--------------------------------------------
..................................................................................................................................................................................TCTAACTGTAACCTTTTCTTAGT.................................................2316.0028.002.00--------1.00------------------------1.001.00----1.00-----
..................................................................................................................................................................................TCTAACTGTAACCTTTTCTTATT.................................................2315.004.002.00-----2.00----1.00----------------------------------
..................................................................................................................................................................................TCTAACTGTAACCTTTTCTTA...................................................2114.004.003.00-------------------------1.00-------------------
..................................................................................................................................................................................TCTAACTGTAACCTTTTCTTAGA.................................................2314.0028.00----1.00------------1.00---------------1.00---1.00--------
......................................................................................................................................................................................................................................CGGAACTTGTGGAGAGAC..1813.003.00-----------1.00-1.00-1.00------------------------------
..............................................................................................................................................................................TTCCTCTAACTGTAACCTTTTCT.....................................................2312.002.00-----2.00----------------------------------------
................................................................................................................................................AAAGGGAGGTTATGGGTTTTA.....................................................................................2112.002.00------------2.00---------------------------------
..........................................................................................................................................................................................................................ACTATGAGCCTTCGGAACTTG...........2112.002.00--------------2.00-------------------------------
................................................................................................................................................................TTTTAGTGGTTTTTTCTGT.......................................................................192.000.00----------2.00-----------------------------------
..............................................................................................................................................................................TTCCTCTAACTGTAACCTTTTCTTAGA.................................................271.000.00--------------------------------------------1.00-
..................................................................................................................................................................................TCTAACTGTAACCTTTTCTTTTT.................................................2311.001.001.00---------------------------------------------
...............................................................................................................................................................................................................................GAGCCTTCGGAACTTGTGGAGAGACT.2611.001.00----1.00-----------------------------------------
....................................................................................................................................................................................................................................TTCGGAACTTGTGGAGAG....1811.001.00---------------------1.00------------------------
.............................................................................................................................................................................................................................ATGAGCCTTCGGAACTTGTGGAGAGACTA2911.001.00---------------------------1.00------------------
..................................................................................................................................................................................................................GCTGAAGTACTATGAGCCTTCGGAACTTGTGGA.......3311.001.00--------1.00-------------------------------------
..................................................................................................................................................................................TCTAACTGTAACCTTTTCTT....................................................2011.001.001.00---------------------------------------------
.......................................................................................................................................................................GGTTTTTTTCCTCTAGGGA................................................................191.000.00-----------------------------------------1.00----
..............................................................................................................................................................................................................TGATGCTGAAGTACTATGAGCC......................2211.001.00------------------------------------1.00---------
...........................................................................................................................................................................................................................CTATGAGCCTTCGGAACTTGTGGAGAGA...2811.001.00-------------------------------1.00--------------
.....................................................................................................................................................................................................................................TCGGAACTTGTGGAGAGAC..1911.001.00----1.00-----------------------------------------
............................................................................................................................................................................................................................TATGAGCCTTCGGAACTTGT..........2011.001.00----------------------------1.00-----------------
..................................................................................................................................................................................TCTAACTGTAACCTTTTCTTAA..................................................2211.004.00-------1.00--------------------------------------
................................................................................................................................................AAAGGGAGGTTATGGGTTTTAGT...................................................................................2311.001.00------1.00---------------------------------------
.............................................................................................................................................................................................................................ATGAGCCTTCGGAACTTGTGGAGAGACT.2811.001.00--------1.00-------------------------------------
..........................................................................................................................................................................TTTTTTCCTCTAACTGTAACCTTT........................................................2411.001.00------------------------------------------1.00---
......................................................................................................................................................................................................................AAGTACTATGAGCCTTCGGAACTTGTGGAGAG....3211.001.00------------------------------1.00---------------
.....................................................................................................................................................................................................................................TCGGAACTTGTGGAGAGACT.2011.001.00---------------------------------------1.00------
..................................................................................................................................................................................TCTAACTGTAACCTTTTCTTAGTA................................................2411.0028.00---------1.00------------------------------------
.....................................................................................................................................................................................................................................TCGGAACTTGTGGAGAGA...1811.001.00---------------1.00------------------------------
....................................................................................................................................................................................................................TGAAGTACTATGAGCCTT....................1811.001.00--------------------1.00-------------------------
.........................................................................................................................................................................................................TACACTGATGCTGAAGTACTATGAGC.......................2611.001.00--------------------------------1.00-------------
..............................................................................................................................................................................................................................TGAGCCTTCGGAACTTGTGGAG......2211.001.00-------------1.00--------------------------------

Antisense strand
CAAGGCTGACTGCCTGCTCCCTTTGGGTCAATGACATGTCTCTTTTTGTTTATTAACATTGCAATGTATTATAATTTAAAATGTTTAACAGTCAGCATTTGTTAGAGTACAGCATGCTACTTGTAGTGATTTAGAAATGTAATTAAAGGGAGGTTATGGGTTTTAGTGGTTTTTTTCCTCTAACTGTAACCTTTTCTTAGGTACACTGATGCTGAAGTACTATGAGCCTTCGGAACTTGTGGAGAGACTA
...............................................................................................................................................(((..(((((((((((...((((.((.......)).)))))))))))))))..)))...................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189783SRR040042(GSM532927)
G428N. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189785SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040043(GSM532928)
G428T. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335
..................................................TATTAACATTGCAATGTTTC.................................................................................................................................................................................... 203.000.00---2.00----------------------------------1.00-------
......................................................................ATAATTTAAAATGTTTAACTTT.............................................................................................................................................................. 221.000.00----------------1.00-----------------------------
..................................................TATTAACATTGCAATGCTCT.................................................................................................................................................................................... 201.000.00---1.00------------------------------------------
..................................................TATTAACATTGCAATGTGTC.................................................................................................................................................................................... 201.000.00---1.00------------------------------------------
................................GACATGTCTCTTTTTGC......................................................................................................................................................................................................... 171.000.00-----------------------------1.00----------------
.......................................................................................................................CTAAATCACTACAAG.................................................................................................................... 1570.430.43----------------0.29----------------------------0.14