ID: uc002wlp.2_intron_1_0_chr20_5096219_r.3p
GENE: (4)
chr20:5096169-5096418-


(1)
AGO2.ip
(21)
B-CELL
(13)
BRAIN
(53)
BREAST
(60)
CELL-LINE
(15)
CERVIX
(1)
FIBROBLAST
(9)
HEART
(5)
HELA
(1)
KIDNEY
(5)
LIVER
(3)
OTHER
(1)
RRP40.ip
(34)
SKIN
(4)
UTERUS
(2)
XRN.ip

Sense strand
AATTTGGTTATCTAAATTATAGCTATAGGAAAGACAAGCTAGATAATCGAGTCTTTTGCTTTATGTATCAGTCTTCAAAATTTTCATAGCTCCCTCCAAAGTGACCAATACAAGTGTTTGTGGGTTTTTATAAATATATAATGAGCTAATAGATTGCAACTTTCTTGATGTTTTTCAATGATGAATCTTTTGTTTTGTAGGTTACCATAGAGATGAATGAACCAGTTCAACTAACTTTTGCACTGAGGTA
............................................................................................................((((.((((((((((....)))))))))).....((((....(((((.((....((((((......)))).)))))))))...))))))))...................................................
..........................................................................................................107..........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553574(SRX182780)
source: Heart. (Heart)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189784SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR189782GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038855(GSM458538)
D10. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR189785SRR037931(GSM510469)
293GFP. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR029126(GSM416755)
143B. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR037938(GSM510476)
293Red. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038854(GSM458537)
MM653. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343334SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR038861(GSM458544)
MM466. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR189787SRR343335SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR040031(GSM532916)
G013T. (cervix)
SRR029128(GSM416757)
H520. (cell line)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532890(GSM532890)
G576T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)
SRR040012(GSM532897)
G648N. (cervix)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038863(GSM458546)
MM603. (cell line)
GSM532887(GSM532887)
G761N. (cervix)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR191538(GSM715648)
49genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................AAGTGTTTGTGGGTTACA.........................................................................................................................18538.000.00-74.0021.0031.0020.0013.006.0010.0013.0014.0010.0024.009.0015.0011.0016.0021.004.007.009.006.0010.008.004.00-8.004.007.00-2.006.00--3.003.004.00-3.005.004.005.00--2.007.002.006.001.001.001.002.004.003.004.001.002.00-3.002.002.004.001.00-1.00-1.002.001.001.004.00--2.00-2.003.001.00-2.001.001.00--2.002.002.001.002.001.00-2.001.002.002.002.001.001.00-1.001.00--1.002.00--1.00-2.001.00-1.00----1.00---1.001.00----1.00----1.001.00------1.00-----1.00-----1.001.00----1.001.00---------1.00---1.00--1.001.00-----1.00--1.00---1.001.00----1.00--1.00-1.001.001.00-----1.001.00---------------------
...............................................................................................................AAGTGTTTGTGGGTTAATC........................................................................................................................19172.000.00171.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAAA.........................................................................................................................18151.000.00-7.002.001.001.00-1.002.001.002.00-1.002.00---1.009.003.003.004.001.001.004.0013.002.00-1.004.008.00---2.002.004.00---1.001.00-2.001.00-1.00-1.002.003.003.00-1.001.00-2.003.001.001.00--1.00-1.00-------1.00-1.00---3.00--1.002.00--1.001.00-----2.00-1.001.00-------1.00----1.00---1.00--1.00--1.001.002.00-1.00------------1.001.00-------1.00-----------1.00-------1.00--1.001.00-1.00----1.00--1.001.001.00------1.00----1.001.00-1.00---------1.00-------1.00--1.001.00--------------
...............................................................................................................AAGTGTTTGTGGGTTACAA........................................................................................................................19105.000.00--2.007.0011.001.0014.003.007.004.006.00-2.003.00---4.002.003.002.001.002.00---1.00------3.001.00----1.001.00--2.00-1.00-----1.001.00----1.00---------3.00-----1.00--2.00-1.00-------1.00-1.00----------1.00----------1.00-------1.00------1.00----------------1.00------1.00------1.00--------------------------1.00----------------------1.00------------------------
...............................................................................................................AAGTGTTTGTGGGTTAC..........................................................................................................................1795.000.00-52.00---2.007.00---3.00---2.00-------1.00----1.00--------------2.00---1.00-3.001.001.00---1.00----1.00------1.00------------1.00---------------1.00--1.00-1.00---------------------------1.00-----------1.00-----1.00---1.00---1.00------1.001.00-1.00--------1.00--------------1.00----1.00-----1.00-------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAAAA........................................................................................................................1977.000.00--1.00-4.001.002.001.003.001.001.00-1.001.00-2.00-2.001.002.003.002.00-2.00--2.00-7.001.00----2.00----1.00-----1.00-2.00-1.00----1.00-1.00----1.00-1.00-4.00--3.00-1.00--1.00-1.00-1.00-1.00-1.00-----------------------2.001.00--------1.00----1.00--------------------1.00-----------1.00-----------------1.00---------1.00--1.00--1.00---------------1.00------1.00--------------------
...............................................................................................................AAGTGTTTGTGGGTTACCA........................................................................................................................1956.000.00--1.00-1.009.002.001.003.003.002.00-1.00-3.002.00-1.003.00-1.00-1.001.00-1.004.001.00--1.00--------------1.00------------2.00--1.00-1.00----------2.00-1.00-----------1.00-------1.00----------------2.00------------------------------1.00--------------------------------------------------------------------1.00-----------------
...............................................................................................................AAGTGTTTGTGGGTTACC.........................................................................................................................1845.000.00-17.002.00-4.00--2.00-3.002.00---4.00------1.00-----1.00-----------------1.00----------------------------------1.00-------------------1.00--------1.001.00-------------------1.00----------------------------1.00--------------------1.00--------------------------1.00-----------------------
...............................................................................................................AAGTGTTTGTGGGTTCCA.........................................................................................................................1840.000.00-16.004.00--7.00--1.00----1.001.00------------------1.00----3.00--------------1.00------------------------------------1.00-1.00-----------1.00----------------------------1.00---1.00---------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTATC.........................................................................................................................1830.000.0029.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TTCAACTAACTTTTGCACTG.....20217.0017.00-------------------------------6.50----5.50-------------------------4.00-------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGAA.........................................................................................................................1814.000.00-------3.00--1.00-2.00--1.00-2.00-------1.00---------------1.00------------2.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTCTA.........................................................................................................................1811.000.00-------1.00----1.00-----1.00---1.001.00------3.00---------------------1.00---1.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTT...........................................................................................................................16810.6210.62-----2.50-----------------------------------------0.120.120.12----0.25-0.12---------------------0.620.120.50-1.881.00-----------0.120.12-------------------------0.88----0.120.120.12---------------------------------------------------------------------------------------0.38-0.120.120.12-0.120.120.120.120.120.120.120.12
..............................................................................................................................................................................................................ATAGAGATGAATGAACCA..........................1819.009.00--7.00----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGCA.........................................................................................................................189.000.00---1.00---------1.00---------------------------------1.00------------------1.00----------------------3.00-------------------------1.00-------------------------------1.00-----------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGAAA........................................................................................................................199.000.00---2.00---3.00----1.002.00-----------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CAAGTGTTTGTGGGTTA...........................................................................................................................177.000.00--------------------------------6.00----------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTCC..........................................................................................................................177.000.00-3.00------------1.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------1.00-------------------------
...............................................................................................................AAGTGTTTGTGGGTTGACA........................................................................................................................195.000.00-------2.001.00---1.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAATT........................................................................................................................195.000.005.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTCA.........................................................................................................................1884.8810.62-----2.50-------0.120.12------0.25------------------0.12-----------------------------------------0.88---------------------------------------0.75---------------------------------------------------------------------------------------------------0.12--------
...............................................................................................................AAGTGTTTGTGGGTTAG..........................................................................................................................174.000.00---------------------------1.00-------------2.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TCAACTAACTTTTGCACTG.....1923.503.50-------------------------------1.50----1.00-------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTACG.........................................................................................................................183.000.00--1.00---------1.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTATA.........................................................................................................................183.000.00-------------------------------------1.00-----2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAACA........................................................................................................................193.000.00------1.00----------------1.00---------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTCTAA........................................................................................................................193.000.00--1.001.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CAAGTGTTTGTGGGTTAA..........................................................................................................................183.000.00--------------------------------1.00--------------------------------------1.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ATAGAGATGAATGAACCAT.........................1913.009.00----------------------------------------------------------------3.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGACT........................................................................................................................193.000.00-------3.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAT..........................................................................................................................173.000.00-1.00---------------------------------------2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGGTG........................................................................................................................193.000.00----------------------------------------------------------------------3.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................ATATATAATGAGCTAATAGATTGCAACTTTCTTGATGTTTTTCAATGATGAATCTTTTGTTTTGTAGT.................................................682.000.00----------------------------------------------------------------------------------------------------------------2.00----------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTACAG........................................................................................................................192.000.00-----------------------------------------1.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGGA.........................................................................................................................182.000.00-------1.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTACT.........................................................................................................................182.000.00-------------------------------------------------------------1.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TGATGAATCTTTTGTTTTGTAG..................................................2212.002.00------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTATG.........................................................................................................................182.000.00-----------------------------------------1.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CATAGAGATGAATGAACCAG.........................2012.002.00------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------1.00------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTCCA........................................................................................................................1981.1210.62-----1.00-------0.12-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGGGA........................................................................................................................191.000.00------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................AGAGATGAATGAACCAGTT.......................1911.001.00----------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................TTCAATGATGAATCTGTTT..........................................................191.000.00-------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..............................................................................................................CAAGTGTTTGTGGGTTAAAA........................................................................................................................201.000.00-----------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGGCA........................................................................................................................191.000.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................TTTTTCAATGATGAATCTTTTGTTTTGTAG..................................................3011.001.00----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ATAGAGATGAATGAACC...........................1711.001.00----------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................TGAGCTAATAGATTGCAAACTT.......................................................................................221.000.00---------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................AGAGATGAATGAACCAGT........................1811.001.00----------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CAAGTGTTTGTGGGTTC...........................................................................................................................171.000.00------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTC..........................................................................................................................1781.0010.62-----0.62----------------------------------------------------------------------------0.25-----------------------------------------------0.12----------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGCGG........................................................................................................................191.000.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAGAA........................................................................................................................191.000.00--------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTACAT........................................................................................................................191.000.00--------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGGCG........................................................................................................................191.000.00---------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TTCAACTAACTTTTGCACTGA....2121.001.00------------------------------------0.50---------------------------------------------------------------------------------------0.50----------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAGCA........................................................................................................................191.000.00------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................ACAAGTGTTTGTGGGTTACCA........................................................................................................................211.000.00--------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTACAC........................................................................................................................191.000.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TTCAACTAACTTTTGCACTGAGGT.2421.001.00-------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGAGCTAATAGATTGGA............................................................................................171.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGAGCTAATAGATTGAAA...........................................................................................181.000.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTCC.........................................................................................................................1881.0010.62-----0.75----------------------------------------------------------------------------0.12-------------------------------------------0.12--------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TCAACTAACTTTTGCACTGA....2021.001.00-------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTTAGT.......................................................................................................................201.000.00---------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAAT.........................................................................................................................181.000.00----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TCAACTAACTTTTGCACTGAGGA.231.000.00----------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------
.............................................................................................................................................TGAGCTAATAGATTGCATAG.........................................................................................201.000.00------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTCCAA........................................................................................................................191.000.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................AGACAAGCTAGATAATCGAG.......................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGCCA........................................................................................................................191.000.00-------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTATTT........................................................................................................................191.000.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTTGAAC......................................................................................................................211.000.00-----------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CAAGTGTTTGTGGGTTACA.........................................................................................................................191.000.00--------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CAAGTGTTTGTGGGTTAC..........................................................................................................................181.000.00------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................AGAGATGAATGAACCAGTTC......................2011.001.00------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAAAC........................................................................................................................191.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
............................................................................................................................................................................................TTTGTTTTGTAGGTTACCATAGAGATGAATGAAC............................3411.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------
.............................................................................................................................................TGAGCTAATAGATTGTA............................................................................................171.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAGTA........................................................................................................................191.000.00--------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ATAGAGATGAATGAACCAG.........................1911.001.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGAGCTAATAGATTGTAT...........................................................................................181.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTAAGT........................................................................................................................191.000.00--------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CCATAGAGATGAATGAACCA..........................2011.001.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TTCAACTAACTTTTGCAC.......1821.001.00-------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTGC..........................................................................................................................171.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CAAGTGTTTGTGGGTTCAAA........................................................................................................................201.000.00--------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTATGA........................................................................................................................191.000.00-----------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................TAATCGAGTCTTTTGC...............................................................................................................................................................................................1611.001.00---------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................AGTTCAACTAACTTTTGCA........1920.500.50------------------------------------------------------------------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AACTTTTGCACTGAGGTA1820.500.50--0.50------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TAACTTTTGCACTGAGG..1720.500.50-------------------------------------------------------------------------------0.50-------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TTCAACTAACTTTTGCACTGAGG..2320.500.50---------------------------------------------------------------------------------------------------------------------------0.50-----------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTGA.........................................................................................................................1880.2510.62---------------------------------------0.12-----------------------------------------0.12-----------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTCAA........................................................................................................................1980.2510.62-------------0.25-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTGGGT.......................................................................................................................2080.1210.62-----------------------------------------------------------------------------------------------------------------------------0.12---------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTGAGT.......................................................................................................................2080.1210.62-------------------------------------------------------0.12-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTGCCC.......................................................................................................................2080.1210.62-----------------------------------------------------------------------------------------------------------------------------0.12---------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTGGA........................................................................................................................1980.1210.62--0.12------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTCAAA.......................................................................................................................2080.1210.62-----0.12---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTCAG........................................................................................................................1980.1210.62-----------------------------------------------0.12---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAGTGTTTGTGGGTTTGGG........................................................................................................................1980.1210.62-----------------------------------------------------------------------------------------------------------------------------0.12---------------------------------------------------------------------------------------------------------

Antisense strand
AATTTGGTTATCTAAATTATAGCTATAGGAAAGACAAGCTAGATAATCGAGTCTTTTGCTTTATGTATCAGTCTTCAAAATTTTCATAGCTCCCTCCAAAGTGACCAATACAAGTGTTTGTGGGTTTTTATAAATATATAATGAGCTAATAGATTGCAACTTTCTTGATGTTTTTCAATGATGAATCTTTTGTTTTGTAGGTTACCATAGAGATGAATGAACCAGTTCAACTAACTTTTGCACTGAGGTA
............................................................................................................((((.((((((((((....)))))))))).....((((....(((((.((....((((((......)))).)))))))))...))))))))...................................................
..........................................................................................................107..........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553574(SRX182780)
source: Heart. (Heart)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189784SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR189782GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038855(GSM458538)
D10. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR189785SRR037931(GSM510469)
293GFP. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR029126(GSM416755)
143B. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR037938(GSM510476)
293Red. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038854(GSM458537)
MM653. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343334SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040037(GSM532922)
G243T. (cervix)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR038861(GSM458544)
MM466. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR189787SRR343335SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR040031(GSM532916)
G013T. (cervix)
SRR029128(GSM416757)
H520. (cell line)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532890(GSM532890)
G576T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)
SRR040012(GSM532897)
G648N. (cervix)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038863(GSM458546)
MM603. (cell line)
GSM532887(GSM532887)
G761N. (cervix)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR191538(GSM715648)
49genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
...........................................TAATCGAGTCTTTTGAAAA............................................................................................................................................................................................ 191.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------
..................................................................ATCAGTCTTCAAAATGTCC..................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
........................ATAGGAAAGACAAGCTAGTT.............................................................................................................................................................................................................. 201.000.00-----------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
........................ATAGGAAAGACAAGCTAGT............................................................................................................................................................................................................... 191.000.00--------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AAACCCACAAACACTT........................................................................................................................... 1680.380.38--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.38------------