ID: uc002wil.2_intron_9_0_chr20_3544011_f.3p
GENE: ATRN(10)
chr20:3545795-3546044+


(2)
BREAST 		(8)
CELL-LINE 		(3)
HEART 		(1)
HELA 		(2)
LIVER 		(1)
OTHER 		(5)
SKIN 		(1)
UTERUS

Sense strand
TGGTATGATCCCGCCTTTCTTCCATGCCCTGTTGCTCTGCTGCTGCTTCATTTTAACCCAGAAATGATGTTGTAACTGAGAAAATTGAGAGGCATGTTTTATGAGGTTCTCTTTGTTGTAGTATTTTTCCCAAAGAAAATGTCAGGTCCTGTTGATTAGAAATGGTAGTCCGTTTAAAAATATATTTTTCTTTCTCCTAGCCTGTGACCGCTGGTCAGTGCTTCCCAGACCTGATCTCCACCATGATGTC
.....................................................((((.((....))..))))..((((....(((.((((((.((.((....)).)))))))).))).))))................................................................................................................................
..................................................51..........................................................................127.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR189785DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................CAGAAATGATGTTGTAACTGAGAAAA......................................................................................................................................................................26118.0018.00-11.007.00-----------------------
...........................................................AGAAATGATGTTGTAACTGAGA.........................................................................................................................................................................2217.007.00---1.00--2.00---1.00---1.00-------1.001.00--
.................................................................................................................TGTTGTAGTATTTTTTTTG......................................................................................................................196.000.005.00---1.00---------------------
.................................................................................................................TGTTGTAGTATTTTTTAG.......................................................................................................................184.000.004.00-------------------------
.................................................................................................................TGTTGTAGTATTTTTTAGA......................................................................................................................192.000.002.00-------------------------
..........................................................CAGAAATGATGTTGTAACT.............................................................................................................................................................................1912.002.00--------2.00-----------------
.....................................TGCTGCTGCTTCATTAT....................................................................................................................................................................................................172.000.00-----2.00--------------------
.................................................................................................................TGTTGTAGTATTTTTAGTC......................................................................................................................191.000.001.00-------------------------
..........................................................................................................................................................................................................................TGCTTCCCAGACCTGATCTCCACCACGA....281.000.00-------------------1.00------
.................................................................................................................TGTTGTAGTATTTTTCTG.......................................................................................................................181.000.00----1.00---------------------
.........................................................................................................................................................................................................CTGTGACCGCTGGTCAGT...............................1811.001.00-----------------1.00--------
...........................................................................................................................................................................................................................GCTTCCCAGACCTGATCTCCACC........2311.001.00-----------1.00--------------
.................................................................................................................TGTTGTAGTATTTTTTAC.......................................................................................................................181.000.001.00-------------------------
..........................................................CAGAAATGATGTTGTAACTGAGA.........................................................................................................................................................................2311.001.00---------------1.00----------
.................................................................................................................TGTTGTAGTATTTTTTTTT......................................................................................................................191.000.001.00-------------------------
.................................................................................................................TGTTGTAGTATTTTTCGCTG.....................................................................................................................201.000.00------------------1.00-------
........TCCCGCCTTTCTTCCCG.................................................................................................................................................................................................................................171.000.00---------1.00----------------
........................................................................................................................................................................................................................AGTGCTTCCCAGACCTGATCTCC...........2311.001.00---1.00----------------------
.................................................................................................................................................................................................................................CAGACCTGATCTCCACCATGATGTC2511.001.00-------1.00------------------
.................................................................................................................TGTTGTAGTATTTTTTCCG......................................................................................................................191.000.001.00-------------------------
.................................................................................................................TGTTGTAGTATTTTTCATAG.....................................................................................................................201.000.001.00-------------------------
.................................................................................................................TGTTGTAGTATTTTTTACA......................................................................................................................191.000.001.00-------------------------
.................................................................................................................TGTTGTAGTATTTTTGG........................................................................................................................171.000.001.00-------------------------
..................................................................................................................................................................................AATATATTTTTCTTTCTCCTTGAG................................................241.000.00------------------------1.00-
.................................................................................................................TGTTGTAGTATTTTTTCGA......................................................................................................................191.000.001.00-------------------------
........TCCCGCCTTTCTTCCATGCCCTGTTG........................................................................................................................................................................................................................2611.001.00---1.00----------------------
.................................................................................AAATTGAGAGGCATGATA.......................................................................................................................................................181.000.00-------1.00------------------
.................................................................................................................TGTTGTAGTATTTTTTCG.......................................................................................................................181.000.001.00-------------------------

Antisense strand
TGGTATGATCCCGCCTTTCTTCCATGCCCTGTTGCTCTGCTGCTGCTTCATTTTAACCCAGAAATGATGTTGTAACTGAGAAAATTGAGAGGCATGTTTTATGAGGTTCTCTTTGTTGTAGTATTTTTCCCAAAGAAAATGTCAGGTCCTGTTGATTAGAAATGGTAGTCCGTTTAAAAATATATTTTTCTTTCTCCTAGCCTGTGACCGCTGGTCAGTGCTTCCCAGACCTGATCTCCACCATGATGTC
.....................................................((((.((....))..))))..((((....(((.((((((.((.((....)).)))))))).))).))))................................................................................................................................
..................................................51..........................................................................127.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR189785DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
............GGGCATGGAAGAAAGGC............................................................................................................................................................................................................................. 1711.001.00----------------1.00---------
......GATCCCGCCTTTCTTGT................................................................................................................................................................................................................................... 171.000.00--------------------1.00-----
......................................................................................................GAGGTTCTCTTTGTTGTG.................................................................................................................................. 181.000.00---------------------1.00----
........................................................................................................................................AAATGTCAGGTCCTGCT................................................................................................. 171.000.00-------------1.00------------
..........................................................................................................................................................................................................................TGCTTCCCAGACCTGATCG............. 191.000.00------------1.00-------------
..............................................................................................................................................AATCAACAGGACCTG............................................................................................. 1590.110.11-------------------------0.11