ID: uc002wgz.1_intron_1_0_chr20_2816961_r.5p
GENE: FAM113A(6)
chr20:2818678-2818927-


(2)
B-CELL 		(3)
BRAIN 		(4)
CELL-LINE 		(1)
HEART 		(1)
HELA 		(4)
LIVER 		(2)
OTHER 		(3)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGTGGCTGACGCCTGGGGCGTGGAGCTGCCCAAGCGTGGCTATCCCCCTGGTGAGCCCTACCATAAGTGGGGGGGTAGTGATGCACTGGGGCCCTCAGAGGACAGGGCTCAGAAACAGAATGGGACACAGCCACTCAAGGGAAGTAGAGGTCCCTTGAAGGACTCCTGTGGCTTCTGCATGCACCTTCCTCAACCCCTGAGGAGGGTTAGATCATCGGAGCAATATTCTTGTCCAAGTTCCAGTTTTCTA
..................................................................(((.((..((.........((.(((((((........))))))))).......((((((.....((..((((((((........)))))))).))..)))))).))..)).)))..((((((((((.....))))))))))...........................................
...............................................................64...............................................................................................................................................209.......................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM359174(GSM359174)
hela_5_1. (hela)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
....................................................................GGGGGGGTAGTGATGAAA....................................................................................................................................................................1822.000.0018.00----1.001.00-1.001.00------------
....................................................................GGGGGGGTAGTGATGAAAA...................................................................................................................................................................1910.000.009.00-1.00-------------------
....................................................................GGGGGGGTAGTGATGGAA....................................................................................................................................................................185.000.005.00---------------------
.....................................................................................................................................................................................................TGAGGAGGGTTAGATCATCGGA...............................2214.004.002.00--1.00---1.00--------------
....................................................................GGGGGGGTAGTGATGGAAA...................................................................................................................................................................193.000.002.00-------1.00-------------
....................................................................................................................................................................................................CTGAGGAGGGTTAGATCATCGGAG..............................2412.002.00-------1.00---------1.00----
.............................................................................................................................................................................................................GTTAGATCATCGGAGCAATA.........................2012.002.00----2.00-----------------
.........................................................................................................................................................................................TTCCTCAACCCCTGAGGAGG.............................................2011.001.00------------1.00---------
........................................................CCTACCATAAGTGGGG..................................................................................................................................................................................1611.001.00-------------1.00--------
....................................................................GGGGGGGTAGTGATGAAGA...................................................................................................................................................................191.000.001.00---------------------
....................................................................GGGGGGGTAGTGATGGAGA...................................................................................................................................................................191.000.001.00---------------------
.......GACGCCTGGGGCGTGGAGCT...............................................................................................................................................................................................................................2011.001.00---------------1.00------
................................................................................................................................................................................................ACCCCTGAGGAGGGTTAGATCATCGG................................2611.001.00-----------1.00----------
....................................................................GGGGGGGTAGTGATGAAG....................................................................................................................................................................181.000.001.00---------------------
....................................................................GGGGGGGTAGTGATGAATA...................................................................................................................................................................191.000.001.00---------------------
...............................................................................................................................................................................................................TAGATCATCGGAGCAATATTCTTGTC.................2611.001.00----------1.00-----------
......................................................................................................................................................................................................GAGGAGGGTTAGATCATCGGAGCA............................2411.001.00--1.00-------------------
...............................................................................................CAGAGGACAGGGCTCAGAAACAGAATGGGACG...........................................................................................................................321.000.00---1.00------------------
..............................................................................................................................................................................................CAACCCCTGAGGAGGGTTAGATCATCGGAGC.............................3111.001.00-----1.00----------------
....................................................................GGGGGGGTAGTGATGAA.....................................................................................................................................................................171.000.00--1.00-------------------
...................................................................TGGGGGGGTAGTGATTCG.....................................................................................................................................................................181.000.00--------------1.00-------
.................................................................................TGCACTGGGGCCCTCAGAGGACAGGGCC.............................................................................................................................................281.000.00----------------1.00-----
....................................................................GGGGGGGTAGTGATGATTA...................................................................................................................................................................191.000.001.00---------------------
................................................................................................AGAGGACAGGGCTCAGAAACAGAATGGGACGCA.........................................................................................................................331.000.00------------------1.00---
....................................................................GGGGGGGTAGTGATGACA....................................................................................................................................................................181.000.00------1.00---------------
....................................................................GGGGGGGTAGTGATGGAG....................................................................................................................................................................181.000.001.00---------------------
............................................................................................................................................................GAAGGACTCCTGTGGC..............................................................................1650.200.20--------------------0.20-
....................................................................................................................................................................................................CTGAGGAGGGTTAGA.......................................1570.140.14---------------------0.14

Antisense strand
TGTGGCTGACGCCTGGGGCGTGGAGCTGCCCAAGCGTGGCTATCCCCCTGGTGAGCCCTACCATAAGTGGGGGGGTAGTGATGCACTGGGGCCCTCAGAGGACAGGGCTCAGAAACAGAATGGGACACAGCCACTCAAGGGAAGTAGAGGTCCCTTGAAGGACTCCTGTGGCTTCTGCATGCACCTTCCTCAACCCCTGAGGAGGGTTAGATCATCGGAGCAATATTCTTGTCCAAGTTCCAGTTTTCTA
..................................................................(((.((..((.........((.(((((((........))))))))).......((((((.....((..((((((((........)))))))).))..)))))).))..)).)))..((((((((((.....))))))))))...........................................
...............................................................64...............................................................................................................................................209.......................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM359174(GSM359174)
hela_5_1. (hela)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
..........................................................................................................................................................................................TCCTCAACCCCTGAGCCGG............................................. 193.000.00-3.00--------------------
..........................................................................................................CCATTCTGTTTCTGAGC............................................................................................................................... 1720.500.50---0.50------------------
...CCCCAGGCGTCAGCC........................................................................................................................................................................................................................................ 1540.250.25-------------------0.25--