ID: uc002waz.2_intron_26_0_chr2_242207957_r.5p
GENE: (1)
chr2:242211976-242212225-


(3)
AGO2.ip
(10)
B-CELL
(1)
BRAIN
(7)
BREAST
(34)
CELL-LINE
(9)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(1)
HELA
(4)
LIVER
(3)
OTHER
(1)
RRP40.ip
(35)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
CGCGGGGGGCGAGTAAGCCAGCGGCAGGACCAGCGGGCGGGGGCCCACGAGTGAGCGCGCAACACGGGGCTGGGAGGCCTGGGCGGGCGGGCGGACGGGGCGGGCGGGCTGCCGGGCGGGGGGGTGGGGGGTGGCTGCTGACGTGGAGGCCGCGGAGGGGGAGGGGCCCGGGTGCCGCGGCCCCCACCCGGGCCCCAGGCTGCGGCCCCCGCCCGCGGGTGTCCTGCTTACCGCGCGTGGCGGTTCCGGG
......................................................((.(((....((((.((...)).)))).))).))...((..((((((......))).)))..))....................................................................................................................................
..................................................51..................................................................................135.................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040034(GSM532919)
G001N. (cervix)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191636(GSM715746)
105genomic small RNA (size selected RNA from . (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM532929(GSM532929)
G702N. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029126(GSM416755)
143B. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR189783SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
..................................................................................................................GGCGGGGGGGTGGGGTC.......................................................................................................................1716.000.00--2.004.00-------------1.00--1.00------------1.00--1.00-------1.00--------1.00--1.00------------1.00----1.00-----1.00-----------------------------
.....................................................................................................................GGGGGGGTGGGGGGTATC...................................................................................................................189.000.00-9.00------------------------------------------------------------------------------------------------------------
............................................................AACACGGGGCTGGGAGGC............................................................................................................................................................................1819.009.009.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................GGCGGGGGGGTGGGGTCC......................................................................................................................187.000.00----2.00------1.00---1.00-------2.00-----------1.00--------------------------------------------------------------------------
..................................................................................................................GGCGGGGGGGTGGGGTCCT.....................................................................................................................194.000.00---2.00-----------1.00----1.00-----------------------------------------------------------------------------------------
................................................................................GGGCGGGCGGGCGGACGTTT......................................................................................................................................................203.000.00--3.00-----------------------------------------------------------------------------------------------------------
..................................................................................GCGGGCGGGCGGACGGCG......................................................................................................................................................183.000.00-------------------2.00-----------------------------1.00------------------------------------------------------------
..........GAGTAAGCCAGCGGCAGGACCA..........................................................................................................................................................................................................................2213.003.00-------------------------1.00-----------------1.00-------1.00----------------------------------------------------------
........................CAGGACCAGCGGGCGGGGGCCCAC..........................................................................................................................................................................................................2412.002.00----------------2.00---------------------------------------------------------------------------------------------
..........GAGTAAGCCAGCGGCAGGACTTTA........................................................................................................................................................................................................................242.000.00--------------1.00------1.00----------------------------------------------------------------------------------------
..........................................................GCAACACGGGGCTGGGAGGC............................................................................................................................................................................2012.002.00-----------------1.00--------------------------------------------1.00-----------------------------------------------
..........GAGTAAGCCAGCGGCAGGACCAG.........................................................................................................................................................................................................................2312.002.00---------2.00----------------------------------------------------------------------------------------------------
....................................................................................................CGGGCGGGCTGCCGGTGG....................................................................................................................................182.000.00----------------------------2.00---------------------------------------------------------------------------------
..........GAGTAAGCCAGCGGCAGGACTTT.........................................................................................................................................................................................................................232.000.00------------------------1.00--------------------1.00----------------------------------------------------------------
...............................................................................................................................GGGGTGGCTGCTGACGTTTCT......................................................................................................212.000.00----------------------2.00---------------------------------------------------------------------------------------
..................................................................................................................GGCGGGGGGGTGGGGGGTCC....................................................................................................................202.000.00--------------1.00------1.00----------------------------------------------------------------------------------------
............GTAAGCCAGCGGCAGGACCAG.........................................................................................................................................................................................................................2112.002.00--2.00-----------------------------------------------------------------------------------------------------------
...............................................................................TGGGCGGGCGGGCGGACG.........................................................................................................................................................1881.501.50----------0.12-------------------0.25-0.120.12----------------------------------------------------------0.12-------0.120.120.120.12-0.120.12---
................................................................................................................CGGGCGGGGGGGTGGTGT........................................................................................................................181.000.00---------------------------------------------------------1.00----------------------------------------------------
...........AGTAAGCCAGCGGCAGGACCA..........................................................................................................................................................................................................................2111.001.00----------------------------------------------------------------1.00---------------------------------------------
................................................................................................GGGGCGGGCGGGCTGTCG........................................................................................................................................181.000.00--------------------------------------------------------------------------------------1.00-----------------------
...............................................................................................CGGGGCGGGCGGGCTGCGGA.......................................................................................................................................201.000.00------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................CCCCCACCCGGGCCCCAGGCTGC...............................................2311.001.00------------------------------------------------------1.00-------------------------------------------------------
......................................................................................................................................................CGCGGAGGGGGAGGGCG...................................................................................171.000.00--------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................GGCGGGGGGGTGGGGTCA......................................................................................................................181.000.00-------------------------------------------------------------------1.00------------------------------------------
....................GCGGCAGGACCAGCGGGCGGGGGCCCAC..........................................................................................................................................................................................................2811.001.00-------1.00------------------------------------------------------------------------------------------------------
..........GAGTAAGCCAGCGGCAGGACA...........................................................................................................................................................................................................................211.000.00--------1.00-----------------------------------------------------------------------------------------------------
...............................................................ACGGGGCTGGGAGGCC...........................................................................................................................................................................1611.001.00-----------1.00--------------------------------------------------------------------------------------------------
........GCGAGTAAGCCAGCGGCC................................................................................................................................................................................................................................181.000.00------------------------------------------------1.00-------------------------------------------------------------
................................................................................................................CGGGCGGGGGGGTGGTGG........................................................................................................................181.000.00------------------------------------------1.00-------------------------------------------------------------------
...................................................................................................................GCGGGGGGGTGGGGG........................................................................................................................1501.001.00-----------------------------------------------------------------------------------1.00--------------------------
.................................................................................................................................................................................................CCCAGGCTGCGGCCCACGG......................................191.000.00-----------------------------------------1.00--------------------------------------------------------------------
......................................................................................................................................................CGCGGAGGGGGAGGGGCC..................................................................................1811.001.00-----------------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................CTGCTGACGTGGAGGCC...................................................................................................1711.001.00-----------------------------------------------------------------------1.00--------------------------------------
................................................................................GGGCGGGCGGGCGGACGAAA......................................................................................................................................................201.000.00-------------------------------------------------------------------------------1.00------------------------------
.........CGAGTAAGCCAGCGGCAGGACCAGCG.......................................................................................................................................................................................................................2611.001.00--------------------------1.00-----------------------------------------------------------------------------------
.......................................................................................CGGGCGGACGGGGCGGGG.................................................................................................................................................181.000.00------------------1.00-------------------------------------------------------------------------------------------
......................................................................................GCGGGCGGACGGGGCCG...................................................................................................................................................171.000.00-----1.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................AGGCCGCGGAGGGGGAGGGGC...................................................................................2111.001.00------------------1.00-------------------------------------------------------------------------------------------
..................................................................................................................GGCGGGGGGGTGGGGTTC......................................................................................................................181.000.00---------------------------1.00----------------------------------------------------------------------------------
.......................................................................................................GCGGGCTGCCGGGCGGCGGG...............................................................................................................................201.000.00-------------------------1.00------------------------------------------------------------------------------------
...................AGCGGCAGGACCAGCGGG.....................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------1.00-------------------------------------------
................GCCAGCGGCAGGACCAGC........................................................................................................................................................................................................................1811.001.00----------------------------------1.00---------------------------------------------------------------------------
.................CCAGCGGCAGGACCAGGC.......................................................................................................................................................................................................................181.000.00-----------------------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................AGGCCGCGGAGGGGGA........................................................................................1611.001.00--------------------------1.00-----------------------------------------------------------------------------------
.........................AGGACCAGCGGGCGGGGGC..............................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------1.00---------------------
.........................................................................................................GGGCTGCCGGGCGGGGCTTG.............................................................................................................................201.000.00---------------------------------------------------------------------------------1.00----------------------------
....................................GCGGGGGCCCACGAGTGAG...................................................................................................................................................................................................1911.001.00---------------------------------------------------------------------------1.00----------------------------------
..................................................................................................................GGCGGGGGGGTGGGGGGATG....................................................................................................................201.000.00---------------------------------------------------------------------------------------1.00----------------------
....GGGGGCGAGTAAGCCAGC....................................................................................................................................................................................................................................1811.001.00--------------------------------1.00-----------------------------------------------------------------------------
...............................................................................................CGGGGCGGGCGGGCTGAA.........................................................................................................................................181.000.00---------------------------1.00----------------------------------------------------------------------------------
............GTAAGCCAGCGGCAGGACCAGTTT......................................................................................................................................................................................................................2411.002.00--------------------------------------------------------------------1.00-----------------------------------------
...............................................................................TGGGCGGGCGGGCGGATG.........................................................................................................................................................181.000.00--1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CGGCCCCCGCCCGCGGGGG.............................191.000.00------1.00-------------------------------------------------------------------------------------------------------
..........GAGTAAGCCAGCGGCAGG..............................................................................................................................................................................................................................1811.001.00-------------------------------------------------------1.00------------------------------------------------------
......................................................................................................................................................CGCGGAGGGGGAGGGAGG..................................................................................181.000.00-----------------------------------------------------------------------------------------1.00--------------------
..............................................................................CTGGGCGGGCGGGCGGACG.........................................................................................................................................................1911.001.00-------------1.00------------------------------------------------------------------------------------------------
................................GCGGGCGGGGGCCCACGAGTA.....................................................................................................................................................................................................211.000.00----------1.00---------------------------------------------------------------------------------------------------
............................................................................GCCTGGGCGGGCGGGTGGT...........................................................................................................................................................191.000.00--------1.00-----------------------------------------------------------------------------------------------------
.....................................................................................GGCGGGCGGACGGGGCGGCGTG...............................................................................................................................................221.000.00----------------------------------------------------------------------------1.00---------------------------------
............................................................................................................................................................................................................GCCCCCGCCCGCGGGCT.............................171.000.00------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................GGCTGCGGCCCCCGCCCC...................................181.000.00----------------------------------------1.00---------------------------------------------------------------------
..........GAGTAAGCCAGCGGCAGGACC...........................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------1.00--------------------------------------------------
..........................................................................................................................................................................................................................................GCGTGGCGGTTCCGG.1511.001.00------------------------------------------------------------------------------------1.00-------------------------
.........................AGGACCAGCGGGCGGGGGCCCACGAAAAA....................................................................................................................................................................................................291.000.00----------------------------------------------1.00---------------------------------------------------------------
..........................................................................................GCGGACGGGGCGGGCGGGCTGTA.........................................................................................................................................231.000.00------------1.00-------------------------------------------------------------------------------------------------
...............................................................................TGGGCGGGCGGGCGGAA..........................................................................................................................................................171.000.00-------------------------------------1.00------------------------------------------------------------------------
...........AGTAAGCCAGCGGCAGGACCAG.........................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------------1.00------------------------------------
........................CAGGACCAGCGGGCGGGGGGG.............................................................................................................................................................................................................211.000.00----1.00---------------------------------------------------------------------------------------------------------
...............................................................................................CGGGGCGGGCGGGCTTGAA........................................................................................................................................191.000.00------1.00-------------------------------------------------------------------------------------------------------
........................CAGGACCAGCGGGCGGGGA...............................................................................................................................................................................................................191.000.00------------------------------------------------------------1.00-------------------------------------------------
.................................................................................................................................................GAGGCCGCGGAGGGGGA........................................................................................1711.001.00-----1.00--------------------------------------------------------------------------------------------------------
...................................................................................CGGGCGGGCGGACGGCG......................................................................................................................................................171.000.00----------------------------------------------------------1.00---------------------------------------------------
........................................................................................................CGGGCTGCCGGGCGGGAC................................................................................................................................181.000.00----------------------------------------------------1.00---------------------------------------------------------
..........................................................................................................................................................................................................................................GCGTGGCGGTTCCGGCGGC1911.001.00--------------------------------------1.00-----------------------------------------------------------------------
..............................................................................................................GCCGGGCGGGGGGGTGCGCG........................................................................................................................201.000.00-------------1.00------------------------------------------------------------------------------------------------
..................CAGCGGCAGGACCAGCGGGCGGGGTTTT............................................................................................................................................................................................................281.000.00-------1.00------------------------------------------------------------------------------------------------------
.....................................................................................................................GGGGGGGTGGGGGGTTATG..................................................................................................................191.000.00--------------------------------------------------1.00-----------------------------------------------------------
...........AGTAAGCCAGCGGCAGGACT...........................................................................................................................................................................................................................201.000.00-------1.00------------------------------------------------------------------------------------------------------
...............................................................................TGGGCGGGCGGGCGGATA.........................................................................................................................................................181.000.00-------------------------------1.00------------------------------------------------------------------------------
...................................................................................................................................................GGCCGCGGAGGGGGA........................................................................................1570.430.43------------------------------------------------------------------------------------------0.43-------------------
...................................................................................CGGGCGGGCGGACGGG.......................................................................................................................................................1680.380.38--------------------------------------------------------------------------------------------------0.120.12----0.12-----
..........................................................................................................GGCTGCCGGGCGGGGGGG..............................................................................................................................1830.330.33----------------------------------------------------------------------------------------------0.33---------------
...........................................................................................CGGACGGGGCGGGCGGG..............................................................................................................................................1730.330.33---------------------------------------------------------------------------------------------0.33----------------
.......................................................................................................GCGGGCTGCCGGGCG....................................................................................................................................1550.200.20-----------------------------------------------------------------------------------------------0.20--------------
...................................................................................................................................................GGCCGCGGAGGGGGAAA......................................................................................1770.140.43------------------------------------------------------------------------------------------------0.14-------------
...................................................................................................................................................GGCCGCGGAGGGGGAAAA.....................................................................................1870.140.43-------------------------------------------------------------------------------------------------0.14------------

Antisense strand
CGCGGGGGGCGAGTAAGCCAGCGGCAGGACCAGCGGGCGGGGGCCCACGAGTGAGCGCGCAACACGGGGCTGGGAGGCCTGGGCGGGCGGGCGGACGGGGCGGGCGGGCTGCCGGGCGGGGGGGTGGGGGGTGGCTGCTGACGTGGAGGCCGCGGAGGGGGAGGGGCCCGGGTGCCGCGGCCCCCACCCGGGCCCCAGGCTGCGGCCCCCGCCCGCGGGTGTCCTGCTTACCGCGCGTGGCGGTTCCGGG
......................................................((.(((....((((.((...)).)))).))).))...((..((((((......))).)))..))....................................................................................................................................
..................................................51..................................................................................135.................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040034(GSM532919)
G001N. (cervix)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191636(GSM715746)
105genomic small RNA (size selected RNA from . (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM532929(GSM532929)
G702N. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029126(GSM416755)
143B. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR189783SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
...............................................................................................................................................................................CGCGGCCCCCACCCGCA.......................................................... 171.110.00---------0.22-0.110.11----------------0.11-0.11---0.110.11------------------------------------------------------0.110.11-----------------
....................................................................................................................CGGGGGGGTGGGGGGGCAC................................................................................................................... 191.000.00------------------------------1.00-------------------------------------------------------------------------------
..................................GGGCGGGGGCCCACGACC...................................................................................................................................................................................................... 181.000.00---------------------------------------1.00----------------------------------------------------------------------
..................................................................................GCGGGCGGGCGGACGAGG...................................................................................................................................................... 181.000.00---------------------------------------------------------------1.00----------------------------------------------
..........................................................................................................................................................................................................CGGCCCCCGCCCGCGGGGC............................. 191.000.00-------------------------------------------------------------1.00------------------------------------------------
................................................................................................................CGGGCGGGGGGGTGGGGGGCCA.................................................................................................................... 221.000.00-----------------------------------------------------------------------------1.00--------------------------------
.............................................................................................................................................................................................................................CACGCGCGGTAAGCAGGA........... 1811.001.00------------------------------------------------------------------------1.00-------------------------------------
..................................................................................................................GGCGGGGGGGTGGGGGGA...................................................................................................................... 181.000.00----------------------------------------------------------------------------------1.00---------------------------
...........................................................................................................................................................................GTGCCGCGGCCCCCACCCTA........................................................... 201.000.00-------------------------------------------------------------------------------------1.00------------------------
...............................CTCGTGGGCCCCCGCCCGCT....................................................................................................................................................................................................... 2011.001.00-----------------------------------------------------------------1.00--------------------------------------------
.....................................................................................................................................................................................CCCCACCCGGGCCCCTT.................................................... 171.000.00-----1.00--------------------------------------------------------------------------------------------------------
..................................................................GGGCTGGGAGGCCTGGGTTTT................................................................................................................................................................... 211.000.00----------------------------------------------------------------------1.00---------------------------------------
...................................................................................................................................................................................GCCCCCACCCGGGCCGGCG.................................................... 191.000.00------1.00-------------------------------------------------------------------------------------------------------
...........................................................................................................GCTGCCGGGCGGGGGAGCA............................................................................................................................ 191.000.00------------------------------------------------------------------------------1.00-------------------------------
..............AAGCCAGCGGCAGGACCC.......................................................................................................................................................................................................................... 181.000.00----------1.00---------------------------------------------------------------------------------------------------
..............................................................................................................CCCACCCCCCCGCCCGGC.......................................................................................................................... 1820.500.50-----------------------------0.50--------------------------------------------------------------------------------
...............................................................................................................................................................................CGGGTGGGGGCCGCG............................................................ 1590.440.44--------------------------------------------------------------------------------------------0.11--------------0.110.110.11
...............................................................................................................................................................................CGCGGCCCCCACCCGCAG......................................................... 180.220.00-------------------------------0.11-----------------------------------------------------------0.11------------------
.............................................................................................................................................................................CGGGTGGGGGCCGCGGC............................................................ 1750.200.20-------------------------------------------------------------------------------------------0.20------------------
...............................................................................................................................................................................CGCGGCCCCCACCCGCAGT........................................................ 190.110.00----------------------------------0.11---------------------------------------------------------------------------