ID: uc002vzy.2_intron_14_0_chr2_241680795_r.3p
GENE: (32)
chr2:241680745-241680994-


(1)
B-CELL
(2)
BRAIN
(7)
BREAST
(14)
CELL-LINE
(11)
CERVIX
(1)
HEART
(1)
LIVER
(2)
OTHER
(22)
SKIN

Sense strand
ACGTGCTAAGGCCACAGAGTGCCCAGGACCCGGTGTATCTTGGGAATGGCTGGGGTTGGCTGGTTGTTTCCCTTGAGGAGGGGGAGGTGCCCTTGCTGCCTCTGAGTCCCTTTGGCCCCGGCATCTCCTCCTTGAGTGTGCCCTTGGCACGTGATAGGTCAGGTCTCCCATCCATGCATGCCTCCCTCCTGTCCCTACAGTGCCCGCCACCAAGCTCAGCACACTGACGCGGCCCTGTCCGGGACCCTGC
.............................................................................((((((((((((((......(((...(((...))).)))...)))))))))))))).....................................................................................................................
......................................................................71...............................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040036(GSM532921)
G243N. (cervix)
SRR040031(GSM532916)
G013T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR040032(GSM532917)
G603N. (cervix)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR038862(GSM458545)
MM472. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................GGCCCCGGCATCTCCACCA......................................................................................................................1919.000.005.00----1.002.00--1.00-1.00--1.00---------------1.00-----1.001.00---1.00-1.00----1.001.00-----1.00------
..................................................................................................................GCCCCGGCATCTCCTCCA......................................................................................................................186.000.00-2.00--------------1.00--------1.00----------------1.00----1.00--------------
.................................................................................................................GGCCCCGGCATCTCCACCC......................................................................................................................193.000.00--------1.00-----------------------------------1.00--------1.00--------
................................................................................................................TGGCCCCGGCATCTCCACCA......................................................................................................................202.000.00----------1.00------------1.00--------------------------------------
..................................................................................................................GCCCCGGCATCTCCTCCT......................................................................................................................1812.002.00----2.00---------------------------------------------------------
.................................................................................................................GGCCCCGGCATCTCCCCCA......................................................................................................................192.000.00-----------------1.00--------------------1.00-----------------------
.................................................................................................................GGCCCCGGCATCTCCTCCA......................................................................................................................192.000.00----------------------1.00-----------------------1.00---------------
.................................................................................................................GGCCCCGGCATCTCCAA........................................................................................................................171.000.00--------------------------------------------------1.00-----------
.................................................................................................................GGCCCCGGCATCTCCACCG......................................................................................................................191.000.00--------1.00-----------------------------------------------------
...................................................................................................................................................................................................................AAGCTCAGCACACTGACGCGGCCCT..............2511.001.00--------------------------1.00-----------------------------------
..................................................................................................................GCCCCGGCATCTCCTCCAA.....................................................................................................................191.000.00---1.00----------------------------------------------------------
...........................................................................AGGAGGGGGAGGTGCAGGT............................................................................................................................................................191.000.00---------------------------------------------------1.00----------
............................................................................................TTGCTGCCTCTGAGTCCCTTTGGCCCCGGC................................................................................................................................3011.001.00--1.00-----------------------------------------------------------
....................................................................................................................CCCGGCATCTCCTCCATA....................................................................................................................181.000.00---------------------1.00----------------------------------------
..............................................................................................................................................................................................................................ACTGACGCGGCCCTGTC...........1711.001.00--1.00-----------------------------------------------------------
.................................................................................................................GGCCCCGGCATCTCCCCCG......................................................................................................................191.000.00------------------------------------------------------1.00-------
..............................................................................................................................................................................................................CCACCAAGCTCAGCACACTG........................2011.001.00---------------------------------1.00----------------------------
.............................................................................................................................................CCTTGGCACGTGATAGGTCAGGTCT....................................................................................2511.001.00-------------------------------1.00------------------------------
..................................................................................................................GCCCCGGCATCTCCTCCC......................................................................................................................181.000.00-1.00------------------------------------------------------------
........................................................................................................................................................................................................................CAGCACACTGACGCGGC.................1711.001.00-------------1.00------------------------------------------------
...................................................................................................................CCCCGGCATCTCCTCCT......................................................................................................................1711.001.00---------1.00----------------------------------------------------
..................................................................................................................GCCCCGGCATCTCCTCCG......................................................................................................................181.000.00-------------------1.00------------------------------------------
..................................................................................................................GCCCCGGCATCTCCTCCAT.....................................................................................................................191.000.00---1.00----------------------------------------------------------
..................................................................................................................GCCCCGGCATCTCCTGCG......................................................................................................................181.000.00----------------------------1.00---------------------------------
.................................................................................................................GGCCCCGGCATCTCCACTA......................................................................................................................191.000.00-----1.00--------------------------------------------------------
..............................................................................................................................................................................................................................ACTGACGCGGCCCTGTCCGGGACC....2411.001.00--1.00-----------------------------------------------------------
..................................................................................................................GCCCCGGCATCTCCTCCGC.....................................................................................................................191.000.00-1.00------------------------------------------------------------
..............................................................................................................................................................................................................CCACCAAGCTCAGCACACTGACG.....................2311.001.00----------------------------------------1.00---------------------
........................................................................................................................................................................................................................................CCCTGTCCGGGACCC...1570.140.14----------------------------------------------------------0.14---
.....................................................GGTTGGCTGGTTGTTT.....................................................................................................................................................................................1690.110.11-----------------------------------------------------------0.11--

Antisense strand
ACGTGCTAAGGCCACAGAGTGCCCAGGACCCGGTGTATCTTGGGAATGGCTGGGGTTGGCTGGTTGTTTCCCTTGAGGAGGGGGAGGTGCCCTTGCTGCCTCTGAGTCCCTTTGGCCCCGGCATCTCCTCCTTGAGTGTGCCCTTGGCACGTGATAGGTCAGGTCTCCCATCCATGCATGCCTCCCTCCTGTCCCTACAGTGCCCGCCACCAAGCTCAGCACACTGACGCGGCCCTGTCCGGGACCCTGC
.............................................................................((((((((((((((......(((...(((...))).)))...)))))))))))))).....................................................................................................................
......................................................................71...............................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040036(GSM532921)
G243N. (cervix)
SRR040031(GSM532916)
G013T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR040032(GSM532917)
G603N. (cervix)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR038862(GSM458545)
MM472. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
...............................................................................................................................................................CAGGTCTCCCATCCAGG.......................................................................... 175.000.00-------1.00----------1.00----------------1.00---1.00------------1.00---------
...............................................................................................................................................................CAGGTCTCCCATCCAGGA......................................................................... 182.000.00---------------1.00----------------1.00-----------------------------
.............................................................................................................................................................GTCAGGTCTCCCATCACCA.......................................................................... 191.000.00------------1.00-------------------------------------------------
...............................................................................................................................................................CAGGTCTCCCATCCACCTG........................................................................ 191.000.00-------1.00------------------------------------------------------
..............................................................................................................................................................TCAGGTCTCCCATCCAC........................................................................... 171.000.00-----------------------------1.00--------------------------------
..............................................................................................................................................................TCAGGTCTCCCATCCAGGC......................................................................... 191.000.00----------------------------------1.00---------------------------
..............................................................................................................................................................TCAGGTCTCCCATCCAAC.......................................................................... 181.000.00----------1.00---------------------------------------------------
..................................................................................................................AGGAGGAGATGCCGGGGC...................................................................................................................... 1811.001.00---------------------------------------------1.00----------------
..............................................................................................................................................................TCAGGTCTCCCATCCAACG......................................................................... 191.000.00------------------------1.00-------------------------------------
...............................................................................................................................................................CAGGTCTCCCATCCACTG......................................................................... 181.000.00---------------------------1.00----------------------------------
...............................................................................................................................................................CAGGTCTCCCATCCACT.......................................................................... 171.000.00--------------------1.00-----------------------------------------
.................................................................................................................................................................GGTCTCCCATCCATGGC........................................................................ 170.440.00------------0.11-------------------------------------------0.11---0.110.11
.................................................................................................................................................................GGTCTCCCATCCATGG......................................................................... 160.220.00--------------------------------------------------------0.22-----
.................................................................................................................................................................CATGGATGGGAGACC.......................................................................... 1590.220.22-----------0.11---------------------------------------------0.11----
.................................................................................................................................................................GCATGGATGGGAGACC......................................................................... 1650.200.20--------------------------------------------------------0.20-----
.................................................................................................................................................................GGTCTCCCATCCATGGCC....................................................................... 180.110.00---------------------------------------------------------0.11----
.................................................................................................................................................................GGTCTCCCATCCATGGCCT...................................................................... 190.110.00-----------0.11--------------------------------------------------