ID: uc002vql.2_intron_23_0_chr2_231175567_f
GENE: (24)
chr2:231175517-231175918+


(1)
AGO2.ip 		(1)
B-CELL 		(14)
BRAIN 		(14)
BREAST 		(6)
CELL-LINE 		(1)
FIBROBLAST 		(1)
HEART 		(4)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(4)
SKIN 		(1)
UTERUS

Sense strand
GTCAGGAATCTGAGGTCCTGGAGAGGCAGATGTGTCCTGAGGAACAGTTGGTAAATCAGATGCAAACCCCAAGCCTTCTCCTTTCCCCTCACACGTGAGAACCATGAACAAGCGCAAGGGCAGGGGAATGTACTGAAAGGAGCCTGCTCTTCCGCGCCACACTTCAATGGCACTGATAGAACACCACACCTTGTTTGCACAAAAAATAACTCAGCCATGACATGTCTGTTTCCAAGAGCCACACATGTTAGAGAAACTTGAGGAAGAAGGGTGTGAGTTCTGTGCTGTGTCTCATGCATGTGGGCTCATTCTCTCCAAGCTGCTTTTCATTTACGGCCTCTTTCTTTTGCAGAAATGTGAGTTCCTCCTCTTGAAAGTCTATTGCTGTTCTGAGAGCTCCTT
...................................................................................................................................................................................................................................................................((((((((.(((.(((((((((((((((.....)).))))).)))))))).))).....((((...........)))).))))))))........................................................
............................................................................................................................................................................................................................................................253................................................................................................352................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189782GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784SRR189783TAX577740(Rovira)
total RNA. (breast)		SRR189785TAX577741(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577744(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577588(Rovira)
total RNA. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTATAG............................................................................................................................2012.000.00-3.00-1.00--1.00--1.001.00----1.00---1.00-1.00----1.00-----1.00-----------------
...............................GTGTCCTGAGGAACAGTTG................................................................................................................................................................................................................................................................................................................................................................1925.005.005.00-------------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGTGGT...........................................................................................................................2134.001.00--0.33-0.670.330.33-----------0.33---0.33---------------0.33-0.330.330.33-0.33-----
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTA...............................................................................................................................174.000.00--1.00----2.00-----------------1.00------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTATGG............................................................................................................................202.000.00----1.00------------1.00--------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGAGGTT..........................................................................................................................222.000.00----------1.00-----------1.00---------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTTTA.............................................................................................................................192.000.00---1.001.00---------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGTGG............................................................................................................................2031.331.00---------------0.33-----------------------0.33---0.33--0.33---
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTCT..............................................................................................................................181.000.00---1.00----------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTAA..............................................................................................................................181.000.00-----1.00--------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGATGGT..........................................................................................................................221.000.00-------------1.00------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................AAAGTCTATTGCTGTTCTGAGAGT.....241.000.00--------------1.00-----------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTAGA.............................................................................................................................191.000.00------------------------1.00-------------------------
..................TGGAGAGGCAGATGTGTCCTG...........................................................................................................................................................................................................................................................................................................................................................................2121.001.00--------------1.00-----------------------------------
....................................................................CCAAGCCTTCTCCTTTTC............................................................................................................................................................................................................................................................................................................................181.000.00---------1.00----------------------------------------
........................................................................................................................................................................................................................................................................................TGTGCTGTGTCTCATAG.........................................................................................................171.000.00------------------------------1.00-------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTTTGG............................................................................................................................201.000.00----------------1.00---------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGAAA..............................................................................................................................181.000.00-----1.00--------------------------------------------
....................................................................................................................................................................................................................................................................AGGAAGAAGGGTGTGAGTT...........................................................................................................................1921.001.00--0.50---------------------------------0.50-------------
...................................................................................................................................................................................................................................................................GAGGAAGAAGGGTGTGTGG............................................................................................................................191.000.00--------------------1.00-----------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGAGATTT.........................................................................................................................231.000.00------------------1.00-------------------------------
.....................................................................................................................................................................................................................................................................................................................TCTCTCCAAGCTGCTTTTG..........................................................................191.000.00-----------1.00--------------------------------------
...................................................................................................................................................................................................................................................................................................................................TTTTCATTTACGGCCTTTTG...........................................................201.000.00--------1.00-----------------------------------------
...................................................................................................................................................................................................................................................................GAGGAAGAAGGGTGTATAG............................................................................................................................191.000.00-1.00------------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTAAAG............................................................................................................................201.000.00------------1.00-------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTATAA............................................................................................................................201.000.00-------------1.00------------------------------------
...................................................................................................................................................................................................................................................................................................................ATTCTCTCCAAGCTGCTCTT...........................................................................201.000.00--------1.00-----------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTCTT.............................................................................................................................191.000.00--1.00-----------------------------------------------
...................................................................................................................................ACTGAAAGGAGCCTGGCT.............................................................................................................................................................................................................................................................181.000.00----------------------------1.00---------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTAG..............................................................................................................................181.000.00--1.00-----------------------------------------------
....................................................................CCAAGCCTTCTCCTTACG............................................................................................................................................................................................................................................................................................................................181.000.00-1.00------------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTG...............................................................................................................................1731.001.00----------------0.67--0.33------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTAT..............................................................................................................................181.000.00------------1.00-------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGAGGTTT.........................................................................................................................231.000.00-----------------------------1.00--------------------
......................................................................................................................................................................ATGGCACTGATAGAACACA.........................................................................................................................................................................................................................191.000.00-------------------------------1.00------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTATA.............................................................................................................................191.000.00--1.00-----------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGAAGA.............................................................................................................................191.000.00-----------------------1.00--------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGTAGT...........................................................................................................................2130.671.00-----------------0.33---------------0.33----------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGCGGT...........................................................................................................................2130.671.00-----------------0.33-------------------0.33------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGTG.............................................................................................................................1930.671.00--0.33--0.33--------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGCGG............................................................................................................................2030.671.00------0.33--------------------------0.33----------------
............................................................................................................................................................................................................................................................................................................................................................................................ATTGCTGTTCTGAGAGCT....1820.500.50-----------------------------------0.50--------------
............................GATGTGTCCTGAGGAACAGTT.................................................................................................................................................................................................................................................................................................................................................................2120.500.50-------0.50------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGCGTC...........................................................................................................................2130.331.00-----------------------------------------------0.33--
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGTAT............................................................................................................................2030.331.00---------------------0.33----------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGTTGT...........................................................................................................................2130.331.00---------------0.33----------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGCC.............................................................................................................................1930.331.00-0.33------------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGCAGT...........................................................................................................................2130.331.00---0.33----------------------------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGTGT............................................................................................................................2030.331.00----------------------------------0.33---------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGTAG............................................................................................................................2030.331.00-0.33------------------------------------------------
....................................................................................................................................................................................................................................................................AGGAAGAAGGGTGTGAGT............................................................................................................................1830.330.33----------------------------------0.33---------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGT..............................................................................................................................1830.331.00--------------------0.33-----------------------------
..................................................................................................................................................................................................................................................................TGAGGAAGAAGGGTGTGGGGT...........................................................................................................................2130.331.00---------------0.33----------------------------------
...................................................................................................................................................................................................................................................................................................................................................................TGTGAGTTCCTCCTCTTG.............................1840.250.25------------------------------------------------0.25-
....................................................................................................................................................................................................................................................................AGGAAGAAGGGTGTGAG.............................................................................................................................1760.170.17-----------------------0.17--------------------------
........................................................................................................................................................................GGCACTGATAGAACA...........................................................................................................................................................................................................................1570.140.14-------------------------------------------------0.14

Antisense strand
GTCAGGAATCTGAGGTCCTGGAGAGGCAGATGTGTCCTGAGGAACAGTTGGTAAATCAGATGCAAACCCCAAGCCTTCTCCTTTCCCCTCACACGTGAGAACCATGAACAAGCGCAAGGGCAGGGGAATGTACTGAAAGGAGCCTGCTCTTCCGCGCCACACTTCAATGGCACTGATAGAACACCACACCTTGTTTGCACAAAAAATAACTCAGCCATGACATGTCTGTTTCCAAGAGCCACACATGTTAGAGAAACTTGAGGAAGAAGGGTGTGAGTTCTGTGCTGTGTCTCATGCATGTGGGCTCATTCTCTCCAAGCTGCTTTTCATTTACGGCCTCTTTCTTTTGCAGAAATGTGAGTTCCTCCTCTTGAAAGTCTATTGCTGTTCTGAGAGCTCCTT
...................................................................................................................................................................................................................................................................((((((((.(((.(((((((((((((((.....)).))))).)))))))).))).....((((...........)))).))))))))........................................................
............................................................................................................................................................................................................................................................253................................................................................................352................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189782GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784SRR189783TAX577740(Rovira)
total RNA. (breast)		SRR189785TAX577741(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577744(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577588(Rovira)
total RNA. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
..................................................................................................................................................................................................................................................................................GAGTTCTGTGCTGTGCG............................................................................................................... 1710.000.0010.00-------------------------------------------------
................................................TGGTAAATCAGATGCCGG................................................................................................................................................................................................................................................................................................................................................ 181.000.00------1.00-------------------------------------------
....................................................................................................................................................................................................................................................................AGGAAGAAGGGTGTGTACT........................................................................................................................... 191.000.00-----------1.00--------------------------------------
...................................................TAAATCAGATGCAAAGATC............................................................................................................................................................................................................................................................................................................................................ 191.000.00---------------------------1.00----------------------
...............................................................................................................................................................................................................................................................................................................................................TCTGCAAAAGAAAGAGGC................................................. 1830.330.33---------------------------------------------0.33----