ID: uc002voi.2_intron_2_0_chr2_227732035_f.3p
GENE: (3)
chr2:227771309-227771558+


(14)
B-CELL 		(6)
BREAST 		(8)
CELL-LINE 		(1)
CERVIX 		(3)
HEART 		(1)
LIVER 		(1)
OTHER 		(5)
SKIN 		(1)
TESTES

Sense strand
GTTGTTATTCATTGTACTTTTTTTTAAGGTAGGAGATGTTGTTCTTTGGACTGAGTTAAATGCTGCTTAGCATAAAAGACTTGATGTGGAACAAAGCCTGCAGACTGTGACTATTTGACATGCACTGGGCTAATGAGAAGACAGAATGTCTCTAATCAGCAGCAGAACAAACACTCACAAAGGGTCTCCTTCCCTCCTAGGACTTCCTTCGCTGGGCATCTGGCTGGGATTCTTGTTGGACTAATGTACA
............................................................................................................................(((.(((.((.((.((((.....)))))).)).)))..))).....................................................................................
......................................................................................................................119.........................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormSRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343336SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR189782SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
...........................................................................................................................ACTGGGCTAATGAGAAGA.............................................................................................................18115.0015.0014.00-------------------1.00----------------------
............................................................................................................................CTGGGCTAATGAGAAGAC............................................................................................................1818.008.002.004.00--1.00---------------------------1.00----------
...........................................................................................................................ACTGGGCTAATGAGAAGAC............................................................................................................1915.005.003.002.00-----------------------------------------
.........................................................................................................................GCACTGGGCTAATGAGAAGAC............................................................................................................2113.003.00-2.00--------------------1.00--------------------
...........................................................................................................................ACTGGGCTAATGAGAAGACA...........................................................................................................2013.003.002.00---------------1.00--------------------------
.............................................................................................................................TGGGCTAATGAGAAGACAGAATGTCTC..................................................................................................2712.002.00---------------2.00---------------------------
..........................................................................................................................................................ATCAGCAGCAGAACAAACACT...........................................................................2112.002.00-----------------------1.00----------1.00--------
............................................................................................................................CTGGGCTAATGAGAAGACAGAATG......................................................................................................2412.002.00-------1.00---1.00-------------------------------
..........................................................................................ACAAAGCCTGCAGACTGTG.............................................................................................................................................1912.002.001.00---------1.00--------------------------------
............................GTAGGAGATGTTGTTCAA............................................................................................................................................................................................................182.000.00-----1.00------1.00------------------------------
.............................................................................................................................TGGGCTAATGAGAAGACA...........................................................................................................1812.002.001.00--------1.00---------------------------------
............................................................................................................................................................................................................................TGGCTGGGATTCTTGTTGGAC.........2112.002.00-------1.00---1.00-------------------------------
....................................................................................................................................................................................................................................ATTCTTGTTGGACTAATG....1811.001.001.00------------------------------------------
............................................................................................................................................................................................................................TGGCTGGGATTCTTGTTGGACTAA......2411.001.00-------------1.00-----------------------------
.............................TAGGAGATGTTGTTCAAA...........................................................................................................................................................................................................181.000.00-----1.00-------------------------------------
.........CATTGTACTTTTTTTATTG..............................................................................................................................................................................................................................191.000.00--------1.00----------------------------------
..........................................................................................................................CACTGGGCTAATGAGAAGACAGAA........................................................................................................2411.001.00----1.00--------------------------------------
......................................................................................................................................................................................................AGGACTTCCTTCGCTGGG..................................1811.001.00-----------------------------------1.00-------
...................................................................................................................................................................................................................................GATTCTTGTTGGACTAAT.....1811.001.00----------------------------1.00--------------
..............................................................................................................................GGGCTAATGAGAAGACAG..........................................................................................................1831.001.00-----------------------------1.00-------------
.............................................................................................................................TGGGCTAATGAGAAGACAGAATG......................................................................................................2311.001.00---------1.00---------------------------------
.............................................................................GACTTGATGTGGAACAAAGCC........................................................................................................................................................2111.001.00-------------------------------1.00-----------
...............................................................................................................................................................................................................TTCGCTGGGCATCTGGCTGGGATTCTTGTCGG...........321.000.00--1.00----------------------------------------
.........CATTGTACTTTTTTTACTA..............................................................................................................................................................................................................................191.000.00---------------------1.00---------------------
............................GTAGGAGATGTTGTTCAAAA..........................................................................................................................................................................................................201.000.00-----1.00-------------------------------------
.........CATTGTACTTTTTTTTCG...............................................................................................................................................................................................................................181.000.00--------1.00----------------------------------
..............................................................................................................................GGGCTAATGAGAAGACAGAAT.......................................................................................................2111.001.00------------------------1.00------------------
......................................................................................................................................................TCTAATCAGCAGCAGAACAAA...............................................................................2111.001.00-------------------------------------1.00-----
..............................................................................................AGCCTGCAGACTGTGACTATTTGACATG................................................................................................................................2811.001.00-----------------1.00-------------------------
...................................................................................................................................................................................................................CTGGGCATCTGGCTGGGATTCTTGTTGGACT........3111.001.00------1.00------------------------------------
.............................................................................................................................................................................................................CCTTCGCTGGGCATC..............................1531.001.00---------------------------1.00---------------
..........................................................................................................................................................ATCAGCAGCAGAACAAAGGA............................................................................201.000.00-------------------------1.00-----------------
.....................................................................GCATAAAAGACTTGAAG....................................................................................................................................................................171.000.00--------------------------1.00----------------
............................................................................................................................................................................................................................TGGCTGGGATTCTTGTTGGACTAATGT...2711.001.00-------------1.00-----------------------------
..........................................................................................ACAAAGCCTGCAGACTGT..............................................................................................................................................1811.001.00-1.00-----------------------------------------
.......................................................................................................................................................................................................................GCATCTGGCTGGGATTCTTGTTGGACT........2711.001.00------------------------------------1.00------
...................................................................................................................................................................................................................CTGGGCATCTGGCTGGGACT...................201.000.00------------------1.00------------------------
............................................................................................................................CTGGGCTAATGAGAAGACAGAA........................................................................................................2211.001.00----------------1.00--------------------------
............................................................................................................................................................CAGCAGCAGAACAAACACTCACA.......................................................................2311.001.001.00------------------------------------------
................................................................................................................................GCTAATGAGAAGACAGAATGT.....................................................................................................2121.001.001.00------------------------------------------
............................GTAGGAGATGTTGTTCA.............................................................................................................................................................................................................171.000.00------------1.00------------------------------
.............................................................................................................................TGGGCTAATGAGAAGACAG..........................................................................................................1911.001.00----1.00--------------------------------------
..........................................................................................................................................................ATCAGCAGCAGAACAAACAC............................................................................2011.001.00----------1.00--------------------------------
...................................................................................................................................................................................................................................GATTCTTGTTGGACTAAGG....191.000.00------------------------------1.00------------
..........................................................................................................................CACTGGGCTAATGAGAAGA.............................................................................................................1911.001.001.00------------------------------------------
............................................................................................................................CTGGGCTAATGAGAAGACAGA.........................................................................................................2111.001.001.00------------------------------------------
.........................................................................................AACAAAGCCTGCAGACTG...............................................................................................................................................1811.001.001.00------------------------------------------
..........................................................................................................................CACTGGGCTAATGAGAAGACAGA.........................................................................................................2311.001.00-1.00-----------------------------------------
................................................................................................................................................................................................................TCGCTGGGCATCTGGCTGGGATTCC.................251.000.00--1.00----------------------------------------
..............................................................................................................................GGGCTAATGAGAAGACAGAATG......................................................................................................2211.001.00--------------------------------------1.00----
...........................................................................................................................ACTGGGCTAATGAGAAGAAA...........................................................................................................2011.0015.001.00------------------------------------------
.............................................................................................................................TGGGCTAATGAGAAGACAGAATGT.....................................................................................................2411.001.00-1.00-----------------------------------------
.............................................................................................................................................................AGCAGCAGAACAAACACT...........................................................................1820.500.50-0.50-----------------------------------------
....................................................................................................................................................................................................................TGGGCATCTGGCTGGGATTC..................2020.500.50---------------------------------------0.50---
.................................................................................................................................CTAATGAGAAGACAGAAT.......................................................................................................1830.330.33----------------------------------------0.33--
.................................................................................................................................CTAATGAGAAGACAGAATG......................................................................................................1930.330.330.33------------------------------------------
..................................................................................................................................TAATGAGAAGACAGAATG......................................................................................................1830.330.330.33------------------------------------------
...................................................................................................................................AATGAGAAGACAGAATGT.....................................................................................................1830.330.33-----------------------------------------0.33-
......ATTCATTGTACTTTTTTTTGAG..............................................................................................................................................................................................................................2270.290.14-----------------0.29-------------------------
................................GAGATGTTGTTCTTTG..........................................................................................................................................................................................................1650.200.20------0.20------------------------------------
................CTTTTTTTTAAGGTAGG.........................................................................................................................................................................................................................1760.170.17------------------------------------------0.17
......ATTCATTGTACTTTTTTTT.................................................................................................................................................................................................................................1970.140.14------------------0.14------------------------

Antisense strand
GTTGTTATTCATTGTACTTTTTTTTAAGGTAGGAGATGTTGTTCTTTGGACTGAGTTAAATGCTGCTTAGCATAAAAGACTTGATGTGGAACAAAGCCTGCAGACTGTGACTATTTGACATGCACTGGGCTAATGAGAAGACAGAATGTCTCTAATCAGCAGCAGAACAAACACTCACAAAGGGTCTCCTTCCCTCCTAGGACTTCCTTCGCTGGGCATCTGGCTGGGATTCTTGTTGGACTAATGTACA
............................................................................................................................(((.(((.((.((.((((.....)))))).)).)))..))).....................................................................................
......................................................................................................................119.........................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormSRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343336SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR189782SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
..........................................................................................................................................................................................................CTTCCTTCGCTGGGCATGGAA........................... 213.000.00---3.00---------------------------------------
.......TTCATTGTACTTTTTTTAAG............................................................................................................................................................................................................................... 202.000.00--------------2.00----------------------------
..........................................TCTTTGGACTGAGTTAAGG............................................................................................................................................................................................. 191.000.00--1.00----------------------------------------
..........................................TCTTTGGACTGAGTTAAAGG............................................................................................................................................................................................ 201.000.00--1.00----------------------------------------
..........................................TCTTTGGACTGAGTTAAAGGA........................................................................................................................................................................................... 211.000.00--1.00----------------------------------------
.......................................................TTAAATGCTGCTTAGAATC................................................................................................................................................................................ 191.000.00-------------------1.00-----------------------
..........................................TCTTTGGACTGAGTTAAATGG........................................................................................................................................................................................... 211.000.00--1.00----------------------------------------
......ATTCATTGTACTTTTTTTAT................................................................................................................................................................................................................................ 201.000.00---------------------------------1.00---------
........................................GTTCTTTGGACTGAGTTCTG.............................................................................................................................................................................................. 201.000.00------1.00------------------------------------