| (1) AGO1.ip | (1) AGO1.ip OTHER.mut | (2) AGO2.ip | (15) B-CELL | (2) BRAIN | (4) BREAST | (22) CELL-LINE | (1) FIBROBLAST | (4) HEART | (2) HELA | (2) LIVER | (2) OTHER | (1) RRP40.ip | (32) SKIN | (1) UTERUS | (1) XRN.ip |
| TGTCCTGGAAGGATCTAGATGATAGTTTCCCCTGCCCCTTTTGCCACTTGTGCTGTCCAGAAAGGAAATTTATAAGCAATCCCCAGCTGGGTAGTTTGACTGAAATTGCTAAGCAACTCCAGCTAAGAAGCAAGAGGAAGAGGCAGGAAGAGAAGCATGTGTGTAAGAAGCATAATCAGGTTTTGACTTTCTTCTCTCAGAAAGACCTAGAGCTTTTATGTCCAAGGTGCAGTTTGTCCACTGATCACCA ..................................................................................((.(((.((((((((.....)))))))).)))..(((..(((....)))..))).........)).......(((....)))...................................................................................... ..................................................................................83..................................................................................167................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR343336 | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR343337 | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR033731(GSM497076) h929 Cell line (h929). (B cell) | SRR189785 | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR015363(GSM380328) Germinal Center B cell (GC40). (B cell) | SRR343334 | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR189782 | SRR060982(GSM569186) Human centrocyte [09-001]. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | TAX577589(Rovira) total RNA. (breast) | TAX577738(Rovira) total RNA. (breast) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR343335 | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR029128(GSM416757) H520. (cell line) | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR015361(GSM380326) Memory B cells (MM55). (B cell) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553574(SRX182780) source: Heart. (Heart) | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | GSM450606(GSM450606) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................TGGGTAGTTTGACTGGGG................................................................................................................................................. | 18 | 8 | 217.50 | 2.38 | 207.12 | 7.38 | 0.12 | - | - | - | 0.38 | 0.25 | - | - | - | - | 0.12 | 0.75 | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | 0.38 | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | 0.25 | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGGGC................................................................................................................................................ | 19 | 8 | 132.50 | 2.38 | 40.00 | 68.75 | 3.88 | - | - | 2.12 | 2.50 | 1.38 | 0.12 | 0.12 | 0.12 | - | 1.50 | 0.75 | 1.62 | 0.75 | 0.62 | 0.12 | 0.25 | 0.12 | - | - | - | - | - | - | - | - | - | 0.50 | - | 0.50 | 0.50 | - | - | 0.12 | 0.50 | 0.12 | 0.38 | 0.25 | 0.38 | 0.38 | 0.25 | - | - | - | - | - | 0.12 | 0.12 | 0.12 | - | 0.12 | - | 0.12 | 0.25 | 0.25 | 0.25 | 0.25 | - | 0.12 | 0.12 | - | 0.12 | 0.12 | - | 0.12 | - | 0.12 | - | - | 0.12 | - | - | - | 0.12 | 0.12 | 0.12 | 0.12 | 0.12 | 0.12 | 0.12 | 0.12 | - | - | - | - | - | - | 0.12 | 0.12 | - | 0.12 |
| .......................................................................................TGGGTAGTTTGACTGGG.................................................................................................................................................. | 17 | 8 | 6.38 | 2.38 | 0.12 | 1.88 | 0.12 | - | - | - | 0.25 | 0.12 | - | - | - | - | - | - | 0.12 | 0.38 | 0.25 | 0.12 | - | - | 0.12 | - | - | - | - | - | - | - | - | - | 0.75 | - | - | - | 0.25 | 0.38 | 0.12 | 0.12 | - | - | - | - | 0.12 | 0.38 | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | 0.12 | - | - | - | 0.12 | - |
| .......................................................................................TGGGTAGTTTGACTGGGGT................................................................................................................................................ | 19 | 8 | 4.25 | 2.38 | - | 1.88 | 0.12 | - | - | 0.12 | 0.12 | - | - | - | - | - | 0.25 | 0.25 | - | - | 0.25 | - | - | - | - | 0.12 | - | - | - | - | - | - | - | 0.12 | - | - | 0.12 | - | - | - | - | - | - | 0.12 | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - |
| ......................................................................................CTGGGTAGTTTGACTGGG.................................................................................................................................................. | 18 | 4.00 | 0.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................TGGGTAGTTTGACTG.................................................................................................................................................... | 15 | 8 | 2.38 | 2.38 | - | - | 0.12 | - | - | 0.62 | 0.25 | - | - | - | - | - | - | 0.12 | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | 0.12 | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | 0.12 | - | - | 0.12 | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | 0.12 | - | - | - | - |
| ..............CTAGATGATAGTTTCCCCTGCCCCT................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGGA................................................................................................................................................. | 18 | 8 | 1.50 | 2.38 | 1.38 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................CTGGGTAGTTTGACTGGGG................................................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................TGGGTAGTTTGACTGAGG................................................................................................................................................. | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................GCTGGGTAGTTTGACTGGGGC................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................GCTGGGTAGTTTGACTGGG.................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................GCTGGGTAGTTTGACTGGGG................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................GTTTGACTGAAATTGCTAA.......................................................................................................................................... | 19 | 3 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................GGGTAGTTTGACTGAGG................................................................................................................................................. | 17 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................TGGGTAGTTTGACTGAGT................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................AGAAGCAAGAGGAAGAGGCAGGAAGAGAAACAC............................................................................................ | 33 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................TGGGTAGTTTGACTGAGGCG............................................................................................................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................CTCTCAGAAAGACCTGTGA...................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................GCTGGGTAGTTTGACTTGAG................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................TGGGTAGTTTGACTGGTGC................................................................................................................................................ | 19 | 8 | 0.62 | 2.38 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGAG................................................................................................................................................. | 18 | 8 | 0.50 | 2.38 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGTGGC................................................................................................................................................ | 19 | 8 | 0.38 | 2.38 | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................AGGAAGAGAAGCATGTGTG....................................................................................... | 19 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................GGTAGTTTGACTGAAATTGCT............................................................................................................................................ | 21 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGCGG................................................................................................................................................. | 18 | 8 | 0.25 | 2.38 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGGT................................................................................................................................................. | 18 | 8 | 0.25 | 2.38 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGTG................................................................................................................................................. | 18 | 8 | 0.25 | 2.38 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGGGG................................................................................................................................................ | 19 | 8 | 0.25 | 2.38 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGAGC................................................................................................................................................ | 19 | 8 | 0.12 | 2.38 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGCGC................................................................................................................................................ | 19 | 8 | 0.12 | 2.38 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGGC................................................................................................................................................. | 18 | 8 | 0.12 | 2.38 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGCCT................................................................................................................................................ | 19 | 8 | 0.12 | 2.38 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGGAC................................................................................................................................................ | 19 | 8 | 0.12 | 2.38 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGGCG................................................................................................................................................. | 18 | 8 | 0.12 | 2.38 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TGGGTAGTTTGACTGCGGC................................................................................................................................................ | 19 | 8 | 0.12 | 2.38 | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGTCCTGGAAGGATCTAGATGATAGTTTCCCCTGCCCCTTTTGCCACTTGTGCTGTCCAGAAAGGAAATTTATAAGCAATCCCCAGCTGGGTAGTTTGACTGAAATTGCTAAGCAACTCCAGCTAAGAAGCAAGAGGAAGAGGCAGGAAGAGAAGCATGTGTGTAAGAAGCATAATCAGGTTTTGACTTTCTTCTCTCAGAAAGACCTAGAGCTTTTATGTCCAAGGTGCAGTTTGTCCACTGATCACCA ..................................................................................((.(((.((((((((.....)))))))).)))..(((..(((....)))..))).........)).......(((....)))...................................................................................... ..................................................................................83..................................................................................167................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR343336 | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR343337 | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR033731(GSM497076) h929 Cell line (h929). (B cell) | SRR189785 | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR015363(GSM380328) Germinal Center B cell (GC40). (B cell) | SRR343334 | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR189782 | SRR060982(GSM569186) Human centrocyte [09-001]. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | TAX577589(Rovira) total RNA. (breast) | TAX577738(Rovira) total RNA. (breast) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR343335 | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR029128(GSM416757) H520. (cell line) | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR015361(GSM380326) Memory B cells (MM55). (B cell) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553574(SRX182780) source: Heart. (Heart) | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | GSM450606(GSM450606) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................CAATCCCCAGCTGGGTGGG........................................................................................................................................................... | 19 | 6.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................CAATCCCCAGCTGGGTG............................................................................................................................................................. | 17 | 5.00 | 0.00 | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................CAATCCCCAGCTGGGTGG............................................................................................................................................................ | 18 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................GCAATCCCCAGCTGGGGGT............................................................................................................................................................ | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................TGTCCACTGATCACCTAT | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |