ID: uc002vlr.2_intron_1_0_chr2_220364738_f
GENE: (2)
chr2:220364688-220364892+


(2)
AGO1.ip 		(1)
AGO2.ip 		(2)
B-CELL 		(8)
BRAIN 		(14)
BREAST 		(9)
CELL-LINE 		(10)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(1)
HELA 		(1)
LIVER 		(1)
OTHER 		(8)
SKIN 		(2)
UTERUS

Sense strand
AGTCACCATTATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGGGTGAGGTGCCAGGGGAATGGGGGGAGGAGGTTGGGCTGGAGTGGTAGGCGGGATGGGGGCAGAGGAAGGCAGGAGGCCGAAATGTTCTCCTCTCTCCTCTCCCAGGAACTCGCTTCAGACCTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCT
..............................................................................((((..(((..........((.........)).......)))....)))).............................................................................
................................................................65....................................................................135....................................................................
SizePerfect hitTotal NormPerfect NormSRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040037(GSM532922)
G243T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040036(GSM532921)
G243N. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040038(GSM532923)
G531N. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR040040(GSM532925)
G612N. (cervix)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR191463(GSM715573)
111genomic small RNA (size selected RNA from . (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR040011(GSM532896)
G529T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)		SRR029130(GSM416759)
DLD2. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................GGGGGAGGAGGTTGGATAG.....................................................................................................................1925.000.00-18.001.002.00--1.00----1.00--1.00---1.00--------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTGGTT..................................................................................................................22113.001.0013.00--------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTGGT...................................................................................................................2117.001.007.00--------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGTAT.......................................................................................................................185.000.00--1.00-------2.00-1.00---------------1.00----------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTGTT...................................................................................................................214.000.003.00-----------------1.00--------------------------------------------
.....................................................................GGGGGAGGAGGTTGGACAG.....................................................................................................................194.000.00-4.00-------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGATAA.....................................................................................................................193.000.00-2.00---------1.00---------------------------------------------------
.............................................................................................................CAGAGGAAGGCAGGAGGCCGAA..........................................................................2213.003.00------------------------------------------------------1.00--1.001.00----
........................................................................................GAGTGGTAGGCGGGATGGGGGCAGAGGAAGGC.....................................................................................3213.003.00-------------------2.00-----1.00-------------------------------------
....................................................................GGGGGGAGGAGGTTGGGTGG.....................................................................................................................203.000.00-------1.00-------1.00--------------1.00--------------------------------
.....................GGTGATCCTGATTGGAGGCCCT..................................................................................................................................................................2213.003.00----3.00----------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGTGTG......................................................................................................................193.000.00-----1.00---------------------------1.00------1.00----------------------
....................................................................GGGGGGAGGAGGTTGGAGAG.....................................................................................................................202.000.00-1.00-1.00-----------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGGGTGGT....................................................................................................................212.000.00--------------1.00--------------------------1.00---------------------
.....................................................................GGGGGAGGAGGTTGGAT.......................................................................................................................172.000.00---------2.00-----------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTGTTT..................................................................................................................222.000.002.00--------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTGT....................................................................................................................202.000.002.00--------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGATT......................................................................................................................182.000.00------2.00--------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTAGT...................................................................................................................212.000.002.00--------------------------------------------------------------
......................................................................................................................................TTCTCCTCTCTCCTCTCCCAG..................................................2112.002.00----------------------------------------------------1.00--1.00-------
.....................................................................GGGGGAGGAGGTTGGTTTG.....................................................................................................................192.000.00-1.00-1.00-----------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGTGT.......................................................................................................................182.000.00-----1.00-1.00-------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGATTA.....................................................................................................................192.000.00-----------------1.00--------------------------1.00------------------
......................................................................................................................................TTCTCCTCTCTCCTCTCCCAGT.................................................2212.002.00---------------------1.00---------------------1.00-------------------
.....................................................................GGGGGAGGAGGTTGGATTG.....................................................................................................................192.000.001.00--1.00-----------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGGGGG....................................................................................................................202.000.002.00--------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGTA........................................................................................................................172.000.00------------1.00----1.00---------------------------------------------
.....................................................................GGGGGAGGAGGTTGGAAAA.....................................................................................................................192.000.00-2.00-------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGGA........................................................................................................................172.000.00--2.00------------------------------------------------------------
........................................................................GGAGGAGGTTGGGCTGG....................................................................................................................1712.002.00--------------------------------1.00--1.00---------------------------
....................................................................GGGGGGAGGAGGTTGTATA......................................................................................................................192.000.00----1.00--1.00-------------------------------------------------------
......................................................................GGGGAGGAGGTTGGGCTGGTT..................................................................................................................211.000.001.00--------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGGGTGT.....................................................................................................................201.000.00-----------1.00---------------------------------------------------
....................CGGTGATCCTGATTGGAGGC.....................................................................................................................................................................2011.001.00-----------------------------------------------------1.00---------
.....................................................................GGGGGAGGAGGTTGGGCTGG....................................................................................................................2011.001.001.00--------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGTGCC......................................................................................................................191.000.00-----1.00---------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGGACAG.....................................................................................................................201.000.00--1.00------------------------------------------------------------
.......................................................................................................................................................................GACCTTTGTCTTTTGAGG....................1811.001.00----------------------1.00----------------------------------------
....................................................................GGGGGGAGGAGGTTGGGTGTT....................................................................................................................211.000.00---------------------------------------------------1.00-----------
.....................................................................GGGGGAGGAGGTTGGATG......................................................................................................................181.000.00-1.00-------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGTGAA......................................................................................................................191.000.00--------1.00------------------------------------------------------
.............................................................................................................CAGAGGAAGGCAGGAGGCCG............................................................................2011.001.00---------------------------1.00-----------------------------------
.....................................................................GGGGGAGGAGGTTGGGTTGG....................................................................................................................201.000.001.00--------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGTATG......................................................................................................................191.000.00----1.00----------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGTGGG....................................................................................................................201.000.001.00--------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGTA.......................................................................................................................171.000.00-1.00-------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTGTTA..................................................................................................................221.000.00------------------------------------------------1.00--------------
.......................................................................................................................................TCTCCTCTCTCCTCTCCCACT.................................................211.000.00---------------1.00-----------------------------------------------
...........................................................................GGAGGTTGGGCTGGATTC................................................................................................................181.000.00--------------------------------------------------------1.00------
....................................................................GGGGGGAGGAGGTTGGATAG.....................................................................................................................201.000.00-----------------------1.00---------------------------------------
............................................................................................GGTAGGCGGGATGGGGGCAGAGGAAGGC.....................................................................................2811.001.00--------------------------1.00------------------------------------
......................................................................................................................................TTCTCCTCTCTCCTCTCCCCGC.................................................221.000.00--------------------------------------------------1.00------------
....................................................................GGGGGGAGGAGGTTGTGGT......................................................................................................................191.000.00--------1.00------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTGTA...................................................................................................................211.000.001.00--------------------------------------------------------------
...........................CCTGATTGGAGGCCCTCAAA..............................................................................................................................................................2011.001.00--------------------1.00------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGGTG.....................................................................................................................191.000.00---------1.00-----------------------------------------------------
.............................................................................................................CAGAGGAAGGCAGGAGGCCGAAAT........................................................................2411.001.00-------------------------------------1.00-------------------------
....................................................................GGGGGGAGGAGGTTGGTT.......................................................................................................................181.000.00-----1.00---------------------------------------------------------
..................................................................................................CGGGATGGGGGCAGAGGAAGGC.....................................................................................2211.001.00----------------1.00----------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTGGGT..................................................................................................................2211.001.001.00--------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTAG....................................................................................................................201.000.001.00--------------------------------------------------------------
...........................................................................................TGGTAGGCGGGATGGGGGCAGAGGAAGGC.....................................................................................2911.001.00----------------1.00----------------------------------------------
....................................................................GGGGGGAGGAGGTTGTCGA......................................................................................................................191.000.00--1.00------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGTTG......................................................................................................................181.000.001.00--------------------------------------------------------------
.......................TGATCCTGATTGGAGGAC....................................................................................................................................................................181.000.00-----------------------------1.00---------------------------------
.....................................................................GGGGGAGGAGGTTGGAATA.....................................................................................................................191.000.001.00--------------------------------------------------------------
.........................................................................................AGTGGTAGGCGGGATGGGGGCAGAGGAAGGC.....................................................................................3111.001.00---------------------------------------1.00-----------------------
.....................................................................GGGGGAGGAGGTTGGGCGGGA...................................................................................................................211.000.001.00--------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGTAAG.....................................................................................................................191.000.00-1.00-------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGTTTT......................................................................................................................191.000.00---------------------------------------------1.00-----------------
....................................................................GGGGGGAGGAGGTTGGACAC.....................................................................................................................201.000.00-1.00-------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGGTAAG.....................................................................................................................201.000.00-1.00-------------------------------------------------------------
.............................................................................................................CAGAGGAAGGCAGGAGGCCGAAA.........................................................................2311.001.00-----------------------------------------------------------1.00---
....................................................................GGGGGGAGGAGGTTGTGCA......................................................................................................................191.000.00--------1.00------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGGTGG....................................................................................................................201.000.001.00--------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGTAGG....................................................................................................................201.000.001.00--------------------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGTACT....................................................................................................................201.000.00-------------1.00-------------------------------------------------
....................................................................GGGGGGAGGAGGTTGAAT.......................................................................................................................181.000.00-------------------------------------------------1.00-------------
.....................................................................GGGGGAGGAGGTTGGATA......................................................................................................................181.000.00-------------1.00-------------------------------------------------
....................................................................GGGGGGAGGAGGTTGGATA......................................................................................................................191.000.00------------1.00--------------------------------------------------
.....................................................................GGGGGAGGAGGTTGGGCTGGTG..................................................................................................................2211.001.001.00--------------------------------------------------------------
....................................................................GGGGGGAGGAGGTTGGGTG......................................................................................................................191.000.00----------1.00----------------------------------------------------
....................................................................GGGGGGAGGAGGTTGGGCAGTT...................................................................................................................221.000.00------------------------------------1.00--------------------------
......................................................................................................................................TTCTCCTCTCTCCTCTCCCAGTAT...............................................2411.002.00--------------------1.00------------------------------------------
.......................................................................................................................................TCTCCTCTCTCCTCTCCCAGTTT...............................................2330.330.33---------------------0.33-----------------------------------------
.......................................................................................................................................TCTCCTCTCTCCTCTCCCAG..................................................2030.330.33------------------------------------------------------------0.33--
...............................................................................................................GAGGAAGGCAGGAGGCC.............................................................................1760.170.17-------------------------------------------------------------0.17-
.............................................................................................................CAGAGGAAGGCAGGAGG...............................................................................1760.170.17-------------0.17-------------------------------------------------
.....................................................................................................................................................................CAGACCTTTGTCTTTT........................1670.140.14--------------------------------------------------------------0.14

Antisense strand
AGTCACCATTATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGGGTGAGGTGCCAGGGGAATGGGGGGAGGAGGTTGGGCTGGAGTGGTAGGCGGGATGGGGGCAGAGGAAGGCAGGAGGCCGAAATGTTCTCCTCTCTCCTCTCCCAGGAACTCGCTTCAGACCTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCT
..............................................................................((((..(((..........((.........)).......)))....)))).............................................................................
................................................................65....................................................................135....................................................................
SizePerfect hitTotal NormPerfect NormSRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040037(GSM532922)
G243T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040036(GSM532921)
G243N. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040038(GSM532923)
G531N. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR040040(GSM532925)
G612N. (cervix)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR191463(GSM715573)
111genomic small RNA (size selected RNA from . (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR040011(GSM532896)
G529T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)		SRR029130(GSM416759)
DLD2. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.........................................................................................................GGGGCAGAGGAAGGCAGGAAGT.............................................................................. 222.000.00-------------------------------1.00--------------1.00----------------
..........................................................................................................GGGCAGAGGAAGGCAGGAAGT.............................................................................. 211.000.00----------------------------------1.00----------------------------
.........................................................................................AGTGGTAGGCGGGATACCA................................................................................................. 191.000.00--------------------------------------1.00------------------------
.........................................................................................................GGGGCAGAGGAAGGCAGGAGAGT............................................................................. 231.000.00-----------------------------------------------1.00---------------
........................................................................................................GGGGGCAGAGGAAGGCAGGAGT............................................................................... 221.000.00------------------------------------------1.00--------------------
....................................................................................................GGATGGGGGCAGAGGATAC...................................................................................... 191.000.00------------------------1.00--------------------------------------
.....................................................................................................................................GAGGAGAGAGGAGAAC........................................................ 1680.120.12----------------------0.12----------------------------------------