ID: uc002vhj.2_intron_8_0_chr2_219132337_r.5p
GENE: (1)
chr2:219133905-219134154-


(1)
AGO1.ip 		(1)
BRAIN 		(1)
BREAST 		(4)
CELL-LINE 		(18)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(1)
HELA 		(3)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(9)
SKIN 		(1)
UTERUS

Sense strand
CAGCATGGAGGGCCCCGACGATAGCGAGGTCACCTTTGCATTGCACTCAGGTAGGTCTTTGAGGCGATCCACCTCAAATCAGTTTAGGTGGGCGTGTAAGCATTAAACATCAGCCATGGACAGAACGTTATGGGGGACACAGAGATGGGCAAGATGCTGGCCTTGCGCTGGAGGAGCCCACAGGTGGGAAAGTGTGGCAGAATGGATGATTGCTTGGCTTCTGGCATCAGTCGAGACACCCTCTACTTTG
....................................................................................................((((.....((..((((.(((.....)))))))..))......)))).(((((........)))))....................................................................................
....................................................................................................101.................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR040037(GSM532922)
G243T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR040036(GSM532921)
G243N. (cervix)		SRR040040(GSM532925)
G612N. (cervix)		SRR040038(GSM532923)
G531N. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR040041(GSM532926)
G612T. (cervix)		SRR189782SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040031(GSM532916)
G013T. (cervix)		GSM532886(GSM532886)
G850T. (cervix)		SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787SRR040007(GSM532892)
G601T. (cervix)		SRR040043(GSM532928)
G428T. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM532885(GSM532885)
G850N. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................................................................GGGCAAGATGCTGGCATAG.....................................................................................19384.000.00156.0099.0073.0018.0010.004.00-5.003.002.002.002.00--2.00--1.001.00-----1.001.001.00-----1.00--1.00----1.00----
..................................................................................................................................................GGGCAAGATGCTGGCATA......................................................................................1832.000.0017.006.002.00--2.00----1.00-1.00---2.00------------------------1.00---
..................................................................................................................................................GGGCAAGATGCTGGCATAA.....................................................................................1917.000.007.005.004.00-1.00----------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCAAA......................................................................................187.000.001.002.001.00-1.00-------2.00--------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCGTAG.....................................................................................197.000.003.001.001.001.00---------------1.00-------------------------
..................................................................................................................................................GGGCAAGATGCTGGCATCG.....................................................................................197.000.003.00-2.00-----1.00----------------------1.00-------------
..................................................................................................................................................GGGCAAGATGCTGGCATAT.....................................................................................195.000.002.002.001.00------------------------------------------
...................................................................................................................................................GGCAAGATGCTGGCCTAGCT...................................................................................205.000.00------5.00--------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCATTG.....................................................................................194.000.002.001.00---------1.00---------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCATAC.....................................................................................194.000.002.001.001.00------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCAGAG.....................................................................................193.000.002.001.00-------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCCTAG.....................................................................................193.000.00-2.00-1.00-----------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCACAG.....................................................................................193.000.002.00----------------1.00---------------------------
..................................................................................................................................................GGGCAAGATGCTGGCCTAGCT...................................................................................213.000.002.00-----------------1.00--------------------------
..................................................................................................................................................GGGCAAGATGCTGGCTTAG.....................................................................................193.000.002.00-1.00------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCAAAA.....................................................................................192.000.00--2.00------------------------------------------
.AGCATGGAGGGCCCCGACGAT....................................................................................................................................................................................................................................2112.002.00---------------2.00-----------------------------
..................................................................................................................................................GGGCAAGATGCTGGCCTTGTTGT.................................................................................231.000.00------------------------------------1.00--------
.......................GCGAGGTCACCTTTGCATTGCACTCAG........................................................................................................................................................................................................2711.001.00-----------------------------1.00---------------
..................................................................................................................................................GGGCAAGATGCTGGCCGAG.....................................................................................191.000.00-1.00-------------------------------------------
..........................AGGTCACCTTTGCATTGCACTCAG........................................................................................................................................................................................................2411.001.00---------------------1.00-----------------------
..................................................................................................................................................GGGCAAGATGCTGGCACAC.....................................................................................191.000.00-1.00-------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCATG......................................................................................181.000.00-1.00-------------------------------------------
...........................................................................................................................................................................................................GGATGATTGCTTGGCTTCTGTA.........................221.000.00------------------------------1.00--------------
...................................TTGCATTGCACTCAGC.......................................................................................................................................................................................................161.000.00----------------------------1.00----------------
..................................................................................................................................................GGGCAAGATGCTGGCGGAG.....................................................................................191.000.00-1.00-------------------------------------------
...................................................................................................................................................GGCAAGATGCTGGCCTACCT...................................................................................201.000.00------1.00--------------------------------------
...................................................................................................................ATGGACAGAACGTTATGGGGGACACAGA...........................................................................................................2811.001.00---------------------------------------1.00-----
..................................................................................................................................................GGGCAAGATGCTGGCTTGG.....................................................................................191.000.00--1.00------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCTATG.....................................................................................191.000.001.00--------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCATT......................................................................................181.000.00-1.00-------------------------------------------
...................................................................................................................................................GGCAAGATGCTGGCCTAGC....................................................................................191.000.00-----1.00---------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCTTA......................................................................................181.000.00--1.00------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCCTACCT...................................................................................211.000.001.00--------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCCA.......................................................................................171.000.00---------------------------1.00-----------------
..................................................................................................................................................GGGCAAGATGCTGGCAAAG.....................................................................................191.000.00-1.00-------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCAAT......................................................................................181.000.00-1.00-------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCGTAT.....................................................................................191.000.00-------------------1.00-------------------------
..................................................................................................................................................GGGCAAGATGCTGGCTTCG.....................................................................................191.000.00---------1.00-----------------------------------
.........................................................................................................AACATCAGCCATGGACAGAACGT..........................................................................................................................2311.001.00-----------------------1.00---------------------
........................................................................................................AAACATCAGCCATGGGCA................................................................................................................................181.000.00-------------1.00-------------------------------
........................CGAGGTCACCTTTGCATTGCA.............................................................................................................................................................................................................2111.001.00----------------------------------1.00----------
..................................................................................................................................................GGGCAAGATGCTGGCAATA.....................................................................................191.000.00----1.00----------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCTAA......................................................................................181.000.001.00--------------------------------------------
.......GAGGGCCCCGACGATAGCG................................................................................................................................................................................................................................1911.001.00--------------------1.00------------------------
..................................................................................................................................................GGGCAAGATGCTGGCCTCGC....................................................................................201.000.001.00--------------------------------------------
...................................................................................................................................................GGCAAGATGCTGGCCTATCT...................................................................................201.000.00------1.00--------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCAT.......................................................................................171.000.00-------------------------------------1.00-------
....ATGGAGGGCCCCGACGATAGC.................................................................................................................................................................................................................................2111.001.00----------------------1.00----------------------
..................................................................................................................................................GGGCAAGATGCTGGCATTT.....................................................................................191.000.001.00--------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCCTAGC....................................................................................201.000.001.00--------------------------------------------
........................CGAGGTCACCTTTGCATTGCACTCA.........................................................................................................................................................................................................2511.001.00--------------------1.00------------------------
..................................................................................................................................................GGGCAAGATGCTGGCATGA.....................................................................................191.000.00-1.00-------------------------------------------
..................................................................................................................................................GGGCAAGATGCTGGCCTCG.....................................................................................191.000.00-------------1.00-------------------------------
.................................CTTTGCATTGCACTCAG........................................................................................................................................................................................................1720.500.50-------------------------------------------0.50-
.................................................................................GTTTAGGTGGGCGTG..........................................................................................................................................................1520.500.50------------------------------------------0.50--

Antisense strand
CAGCATGGAGGGCCCCGACGATAGCGAGGTCACCTTTGCATTGCACTCAGGTAGGTCTTTGAGGCGATCCACCTCAAATCAGTTTAGGTGGGCGTGTAAGCATTAAACATCAGCCATGGACAGAACGTTATGGGGGACACAGAGATGGGCAAGATGCTGGCCTTGCGCTGGAGGAGCCCACAGGTGGGAAAGTGTGGCAGAATGGATGATTGCTTGGCTTCTGGCATCAGTCGAGACACCCTCTACTTTG
....................................................................................................((((.....((..((((.(((.....)))))))..))......)))).(((((........)))))....................................................................................
....................................................................................................101.................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR040037(GSM532922)
G243T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR040036(GSM532921)
G243N. (cervix)		SRR040040(GSM532925)
G612N. (cervix)		SRR040038(GSM532923)
G531N. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR040041(GSM532926)
G612T. (cervix)		SRR189782SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040031(GSM532916)
G013T. (cervix)		GSM532886(GSM532886)
G850T. (cervix)		SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787SRR040007(GSM532892)
G601T. (cervix)		SRR040043(GSM532928)
G428T. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM532885(GSM532885)
G850N. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
..TCGCTATCGTCGGGGCCCTCCATGC............................................................................................................................................................................................................................... 2511.001.00---------------------------------1.00-----------
.CGCTATCGTCGGGGCCCTCCATGCT................................................................................................................................................................................................................................ 2511.001.00--------------------------------------1.00------
.........................................................................................................................................................................................................CAAGCAATCATCCAT.................................. 1530.330.33--------------------------------------------0.33