ID: uc002vgr.2_intron_7_0_chr2_218678540_r.3p
GENE: TNS1(23)
chr2:218678490-218678739-


(1)
B-CELL
(2)
BRAIN
(17)
BREAST
(5)
CELL-LINE
(2)
CERVIX
(3)
HEART
(9)
LIVER
(1)
OTHER
(29)
SKIN
(1)
UTERUS

Sense strand
AAAACAAACATAAAAACCCAACAGAATAAGTTTGCCAACCTGAGTACAGGAAGACCCGTAGGAGTAGTTAAATTTTAACTTTAAAGAAAATTTGTCTCACCTAAGAAAGAACGAAGGTCGGTAGGCTCAATGAGACTTAAGTAAAACTAGCGCCACCGAGGTCTTGCTTCCTCCTCTCTCCTTGTCCCTTCCCCATGCAGCCATCGCGCTCCTCAAGGACCAGGAGCCGGGGGCCTTCATCATCCGCGAC
....................................................((((((((((...((.((((((((..........)))))))).))..)))........)))..))))...................................................................................................................................
..................................................51...........................................................................128........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
TAX577738(Rovira)
total RNA. (breast)
TAX577580(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191569(GSM715679)
54genomic small RNA (size selected RNA from t. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR040033(GSM532918)
G603T. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR040027(GSM532912)
G220T. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................................AAGAACGAAGGTCGGAGG..............................................................................................................................18154.002.001.00--11.001.002.003.00-1.003.001.00---2.001.00-1.00-1.002.00-2.002.00-2.00-2.002.00--1.00-1.001.00----1.00--1.001.001.001.001.001.00--------1.001.00-------1.001.00------
........................................................CGTAGGAGTAGTTAAACGA...............................................................................................................................................................................198.000.00-8.00-----------------------------------------------------------------------
..........................................................................................................AAGAACGAAGGTCGGA................................................................................................................................1617.002.00--------2.00-1.00-1.00--1.00---------------------------------------1.00-------1.00---------
..........................................................................................................AAGAACGAAGGTCGGAGGT.............................................................................................................................1915.002.00---1.00--------1.00-----------------------1.00-----------1.00--1.00---------------------
..........................................................................................................AAGAACGAAGGTCGGAG...............................................................................................................................1714.002.00-------------1.00---1.00------------1.00---------------------------1.00--------------
......................................................................................................................................................................................................................AAGGACCAGGAGCCGGGG..................1813.003.00-------1.00--------1.00---------------------------------1.00----------------------
........................................................CGTAGGAGTAGTTAAACTA...............................................................................................................................................................................193.000.00-3.00-----------------------------------------------------------------------
........................................................CGTAGGAGTAGTTAATCTA...............................................................................................................................................................................193.000.00-3.00-----------------------------------------------------------------------
..........................................................................................................AAGAACGAAGGTCGG.................................................................................................................................1512.002.00-------------1.00----------1.00------------------------------------------------
..........................................................................................................AAGAACGAAGGTCGGTGG..............................................................................................................................182.000.00----1.001.00-------------------------------------------------------------------
......................AGAATAAGTTTGCCAACCTGAG..............................................................................................................................................................................................................2212.002.002.00------------------------------------------------------------------------
..........................................................................................................AAGAACGAAGGTCGGGGG..............................................................................................................................1812.002.00------------------2.00------------------------------------------------------
.................................................................................................................................ATGAGACTTAAGTAAAACTAG....................................................................................................2111.001.00------------------------------------------------------------1.00------------
............................................................................................................GAACGAAGGTCGGTAGGCTA..........................................................................................................................201.000.00-----------------------------------------------------------1.00-------------
..........................................................................................................AAGAACGAAGGTCGGCGG..............................................................................................................................1811.002.00-----1.00-------------------------------------------------------------------
..................................................................................................................................................................................................................CCTCAAGGACCAGGAGCCGGGGGC................2411.001.00--------------------------1.00----------------------------------------------
..........................................................................................................................................................................................................................ACCAGGAGCCGGGGGCAG..............181.000.00---------------------1.00---------------------------------------------------
...................................................AGACCCGTAGGAGTAGTT.....................................................................................................................................................................................1811.001.00--------------------------------1.00----------------------------------------
........................................................CGTAGGAGTAGTTAACGA................................................................................................................................................................................181.000.00-1.00-----------------------------------------------------------------------
..................................................................................................................AGGTCGGTAGGCTCAATGAGACTTAAGTAAAAC.......................................................................................................3311.001.00------1.00------------------------------------------------------------------
................................................GGAAGACCCGTAGGAGTAGTTA....................................................................................................................................................................................2211.001.00--1.00----------------------------------------------------------------------
........................................................CGTAGGAGTAGTTAATCGA...............................................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................................CAAGGACCAGGAGCCGGG...................1811.001.00-------------------1.00-----------------------------------------------------
............................................................................................................................................................................................................................CAGGAGCCGGGGGCCTTCAT..........2011.001.00-----------1.00-------------------------------------------------------------
...........................................................................................................AGAACGAAGGTCGGTAGGCT...........................................................................................................................2011.001.001.00------------------------------------------------------------------------
........................................................CGTAGGAGTAGTTAAAACAT..............................................................................................................................................................................201.000.00-1.00-----------------------------------------------------------------------
..........................................................................................................................................................................................................................ACCAGGAGCCGGGGGCCTTT............201.000.00-------1.00-----------------------------------------------------------------
..........................................................................................................AAGAACGAAGGTCGGGGGT.............................................................................................................................1911.002.00-------------------------------------------------------------------1.00-----
......................................................................................................................................................................................................................AAGGACCAGGAGCCGGGGGC................2011.001.00------------------------1.00------------------------------------------------
............................................................................................................GAACGAAGGTCGGTAGGCTCAATGAGACT.................................................................................................................2911.001.00-------------------------------------1.00-----------------------------------
....................................AACCTGAGTACAGGAAGACCCGTAGGAGTAGT......................................................................................................................................................................................3211.001.00--------------------------1.00----------------------------------------------
..........................................................................................................AAGAACGAAGGTCGGAGGC.............................................................................................................................1911.002.00----1.00--------------------------------------------------------------------
..........................................................................................................AAGAACGAAGGTCGGATG..............................................................................................................................1811.002.00----1.00--------------------------------------------------------------------
........................................................CGTAGGAGTAGTTAATTTA...............................................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------------
........................................................CGTAGGAGTAGTTAAAAGAG..............................................................................................................................................................................201.000.00-1.00-----------------------------------------------------------------------
......................................................................................................................................................................................................................AAGGACCAGGAGCCGGGGGCC...............2111.001.00----1.00--------------------------------------------------------------------
...........................................................................................................................................................................................CTTCCCCATGCAGCCATC.............................................1811.001.00-----------------------------1.00-------------------------------------------
..........................................................................................................AAGAACGAAGGTCGGAGGG.............................................................................................................................1911.002.00--------------------------------------------------------------1.00----------
........................................................CGTAGGAGTAGTTAAATTTTG.............................................................................................................................................................................211.000.00-1.00-----------------------------------------------------------------------
....................................................................................................................................................................................................................TCAAGGACCAGGAGCCGGG...................1911.001.00-----------1.00-------------------------------------------------------------
............................................................................................................GAACGAAGGTCGGTAGGC............................................................................................................................1811.001.00---------------------------------------------------------------------1.00---
..........................................................................................................AAGAACGAAGGTCGGAAG..............................................................................................................................1811.002.00--------------------------------------1.00----------------------------------
......................................................................................................AAGAAAGAACGAAGGTCGGTAGGCTC..........................................................................................................................2611.001.00----------------------------------------------------------------1.00--------
......................................................................................................................................................................................................................AAGGACCAGGAGCCGGGGGCCTT.............2311.001.00-----------------------------------------------------1.00-------------------
.........................................................................................................................................................................................................................GACCAGGAGCCGGGGGCCTTCA...........2211.001.00-----------------------------------------1.00-------------------------------
..................................................................................................................................................................CTTGCTTCCTCCTCTCTCC.....................................................................1920.500.50------------------------------------------------------------------------0.50

Antisense strand
AAAACAAACATAAAAACCCAACAGAATAAGTTTGCCAACCTGAGTACAGGAAGACCCGTAGGAGTAGTTAAATTTTAACTTTAAAGAAAATTTGTCTCACCTAAGAAAGAACGAAGGTCGGTAGGCTCAATGAGACTTAAGTAAAACTAGCGCCACCGAGGTCTTGCTTCCTCCTCTCTCCTTGTCCCTTCCCCATGCAGCCATCGCGCTCCTCAAGGACCAGGAGCCGGGGGCCTTCATCATCCGCGAC
....................................................((((((((((...((.((((((((..........)))))))).))..)))........)))..))))...................................................................................................................................
..................................................51...........................................................................128........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
TAX577738(Rovira)
total RNA. (breast)
TAX577580(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191569(GSM715679)
54genomic small RNA (size selected RNA from t. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR040033(GSM532918)
G603T. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR040027(GSM532912)
G220T. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTATA......................................................... 2019.000.0011.00-7.00-----------------------------------------------------------------1.00----
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTATC......................................................... 2014.000.009.00-4.00----------------------------------------------------------1.00-----------
..............................................................................................................................................................................TCTCTCCTTGTCCCTATC.......................................................... 183.000.002.00-1.00----------------------------------------------------------------------
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTATT......................................................... 203.000.002.00---------------------------------------1.00--------------------------------
.......................................................................................................................................................................................................................................CGGATGATGAAGGCC.... 1522.002.00----------0.50------------------0.500.50----------------------------------------0.50-
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTAG.......................................................... 192.000.001.00---------------------------------------------------1.00--------------------
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTACA......................................................... 202.000.002.00------------------------------------------------------------------------
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTAT.......................................................... 191.000.00-------1.00-----------------------------------------------------------------
.......ACATAAAAACCCAACAAAA................................................................................................................................................................................................................................ 191.000.00----------------1.00--------------------------------------------------------
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTAAC......................................................... 201.000.00--1.00----------------------------------------------------------------------
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTTACC........................................................ 211.000.001.00------------------------------------------------------------------------
..AACAAACATAAAAACCCACTGG.................................................................................................................................................................................................................................. 221.000.00------------------------------------------------------1.00------------------
....................................................................................................................................................................................CTTGTCCCTTCCCCACT..................................................... 171.000.00----------------------------------------------------------------------1.00--
.............................................................................................................................................................................CTCTCTCCTTGTCCCTATC.......................................................... 191.000.001.00------------------------------------------------------------------------
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTGTA......................................................... 201.000.001.00------------------------------------------------------------------------
..........................................................................................................................................................................................................................ACCAGGAGCCGGGGGCATT............. 191.000.00-------------------------------------------------1.00-----------------------
.........................................................................TTTAACTTTAAAGAAGAAC.............................................................................................................................................................. 191.000.00-----------------------------------1.00-------------------------------------
...........................................................................................................................................................................TCCTCTCTCCTTGTCCCTCC........................................................... 201.000.001.00------------------------------------------------------------------------
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTACT......................................................... 201.000.001.00------------------------------------------------------------------------
.............................................................................................................................................................................CTCTCTCCTTGTCCCTTAGC......................................................... 201.000.001.00------------------------------------------------------------------------