ID: uc002vgq.2_intron_1_0_chr2_218672831_r
GENE: TNS1(6)
chr2:218672781-218673375-


(1)
AGO1.ip OTHER.mut
(1)
AGO2.ip
(3)
B-CELL
(4)
BRAIN
(11)
BREAST
(11)
CELL-LINE
(8)
CERVIX
(3)
FIBROBLAST
(7)
HEART
(4)
LIVER
(2)
OTHER
(26)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
TACCCTCTCAACACTGTCACCTTCTGTGACCTGGATCCACAGGAAAGAAAGTAAGTCTCTTGTACACAGCTTCTCTCCCACACAGCTTTCTAACACTGACGTCTGTGTGGGTGCATGCATGTGCATGTGTGTGTGTGTGTGTGTGCATGTGCATACATTCTCCATTCAGCTGGAAGGTCTGCCCATGTGTGAGTAATCGTGTTGGGCATCTTTTGAGTCTTTCCCACTATAGATATGGAGACCCTCCCAGGGACTCAGTGCCCACTGCTACCCCCTCTGCCATGCCCTGACCTTGAATCTGCTTCTCCTCTCCATGATGGGGAGAGCCCCTCAGGAGGCAGGCTGCAGTGTTCTCTCGACCTTGAATGCATCTGTGTGATCTTGGGCAGCTCCTGTCCCTGGGGAATGGGGGAATGGGGGAATGAGGGGGGAATGGGGGGCAGCTCCTCTCCCCAGACCTTCCTGCAGAGGGTCTGGGCATGGGTGGGGCTGGGCTCTAGGGAGAAAGTACGATGATTTACCCTGAGCCCACTTTCTCTCCACAGGTGGATGAAAACAGAGGGTGGTGCCCCTGCTAAGTAAGTGTGACTTCTTA
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................(((((...(((.((((.(((((((.((((.(((..........))).)))))))))))))))))).)).)))..................................................
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................473.....................................................................545................................................
SizePerfect hitTotal NormPerfect NormSRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
TAX577580(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040037(GSM532922)
G243T. (cervix)
TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577743(Rovira)
total RNA. (breast)
SRR189782SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040016(GSM532901)
G645N. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532874(GSM532874)
G699T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR040038(GSM532923)
G531N. (cervix)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR343337SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040029(GSM532914)
G026T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
.....................................CACAGGAAAGAAAGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................176.000.00-5.00-------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCCACTTTCTCTCCACA...................................................2213.003.00---1.00-------------------------------------------------1.00-------------1.00-----------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGTGGGGCTGTGG....................................................................................................183.000.00----3.00--------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAGCCCACTTTCTCTCCATT...................................................2312.001.00---------------------2.00---------------------------------------------------------------
...................................................................................AGCTTTCTAACACTGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................182.000.00-------------------------------------------------------1.00---------------1.00-------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCCACTTTCTCTCCACT...................................................222.000.00-----------------------2.00-------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGGGCTGGGCTCTAGGG.............................................................................................2212.002.00------------------2.00------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGGGCTGGGCTCTAGGGTTT..........................................................................................2612.001.00-------------2.00-----------------------------------------------------------------------
.....TCTCAACACTGTCACCTTCTGTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002.001.00-------------1.00----------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGGGCTGGGCTCTAGGGAGA..........................................................................................2312.002.00----------------------1.00-------------------------------------------------------1.00------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGTGGGGCTGTGGG...................................................................................................192.000.00--------2.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAGCCCACTTTCTCTCCA.....................................................2312.002.00------------------------------------1.00------------------------------------1.00-----------
...................................TCCACAGGAAAGAAAGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................192.000.00---------2.00---------------------------------------------------------------------------
.................................GATCCACAGGAAAGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.002.00----------------1.00----------------1.00---------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCCACTTTCTCTCCACAGT.................................................242.000.00------1.00------------------------------------1.00-----------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCTGAGCCCACTTTCTCTCCC.....................................................241.000.00----------1.00--------------------------------------------------------------------------
............................................................................................................................................................................................GTGAGTAATCGTGTTGGGCATC.................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------------------1.00--------------------------------------
........................TGTGACCTGGATCCACAGGAAAGAAAGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................301.000.00-----1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................GTGTGATCTTGGGCA...............................................................................................................................................................................................................1501.001.00-------------------------------1.00-----------------------------------------------------
..................ACCTTCTGTGACCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-----------------1.00-------------------------------------------------------------------
................................GGATCCACAGGAAAGAAAGTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00-----------------------------------------------1.00-------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAGCCCACTTTCTCTCCACAGT.................................................271.000.00-----1.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCACTTTCTCTCCACAG..................................................2211.001.00----------------1.00--------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCCACTTTCTCTCCATT...................................................221.000.00-----------------------------------1.00-------------------------------------------------
.................................................................................................................................................................................................................................................CCCTCCCAGGGACTCCA.................................................................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------------------------------1.00-----------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCCACTTTCTCTCCACAA..................................................2311.003.00---------------------------------------------------------------------------1.00---------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGTGGGGCTGTCT....................................................................................................181.000.00--------1.00----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGTGGGGCTGTGTG...................................................................................................191.000.00--------------------------------1.00----------------------------------------------------
..................ACCTTCTGTGACCTGGATCCACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCCACTTTCTCTCCACAGAA................................................251.000.00--------------------1.00----------------------------------------------------------------
.......................CTGTGACCTGGATCCACAGGAAAGAAAGTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................321.000.00----------------------------------1.00--------------------------------------------------
...................CCTTCTGTGACCTGGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.001.00------------------------------------------------------------------------------------
........CAACACTGTCACCTTCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.001.00-----------1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGTGGATGAAAACAGAGGGT...............................2411.001.00------------------------------------------1.00------------------------------------------
..................ACCTTCTGTGACCTGCACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------1.00-----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGAAAACAGAGGGTG..............................1811.001.00----------------------1.00--------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCACTTTCTCTCCACAGT.................................................2311.001.00------1.00------------------------------------------------------------------------------
......CTCAACACTGTCACCATCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------1.00-------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGTGGGGCTGTG.....................................................................................................171.000.00----1.00--------------------------------------------------------------------------------
.....................................CACAGGAAAGAAAGTGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------------------1.00-----------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCCACTTTCTCTCCACAGTTT...............................................261.000.00----------------------------------------------------1.00--------------------------------
............ACTGTCACCTTCTGTGACCTGGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.001.00------------------------------------------------------------------------------------
....................................................................GCTTCTCTCCCACACTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------1.00------------------------------
...................................TCCACAGGAAAGAAAGTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------1.00------------------------------------------------------------------------------
...................CCTTCTGTGACCTGGATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------1.00--------------
.................CACCTTCTGTGACCTGGATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.001.00------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................CCCCTCAGGAGGCAGGCTGCAGA......................................................................................................................................................................................................................................................231.000.00----------------------------------------------------------1.00--------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGTGGGGCTGTGT....................................................................................................181.000.00----------1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGAAAACAGCTTG................................191.000.00-----------------------------------------1.00-------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGTCTGGGCATGGGGCTA...........................................................................................................211.000.00------------------------------1.00------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAGCCCACTTTCTCTCC......................................................2211.001.00-----------------1.00-------------------------------------------------------------------
..................ACCTTCTGTGACCTGGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.001.00------------------------------------------------------------------------------------
...........CACTGTCACCTTCTGTGACCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---1.00---------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAGCCCACTTACCA.........................................................191.000.00-----------------------------------------------------------1.00-------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGAGGGGGGAATGGGGGGC..........................................................................................................................................................2311.001.00---------------------------------------------------------1.00---------------------------
...................................................................................AGCTTTCTAACACTGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00----------------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGCTCTAGGGAGAA.........................................................................................1811.001.00--------------------------------------1.00----------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCTGAGCCCACTTTCTC.........................................................2011.001.00--------------------------------------------------------------------1.00----------------
.....................TTCTGTGACCTGGATCCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---1.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................CCTCAGGAGGCAGGCTGCAGTGTT...................................................................................................................................................................................................................................................2411.001.00-----------------------------------------------------------------------------1.00-------
..................................................GTAAGTCTCTTGTACACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------1.00---------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CAGGAGGCAGGCTGCAGTGTT...................................................................................................................................................................................................................................................2111.001.00--------------1.00----------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................CTCAGGAGGCAGGCTGCTTT......................................................................................................................................................................................................................................................201.000.00---------------------------------------------1.00---------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATGAAAACAGAGGGTGG.............................2111.001.00----------------------------------------1.00--------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCCACTTTCTCTCCACAGA.................................................241.000.00--------------------------------------------------------------1.00----------------------
...................................................................AGCTTCTCTCCCACATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------1.00---------------------------------------------------------------------
....................CTTCTGTGACCTGGATCCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---1.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATGATTTACCCTGAGCCCA................................................................2311.001.00------------------------------------------------------------------1.00------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCTGAGCCCACTTTCTCT........................................................2111.001.00------------------------------------------------------------------------1.00------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGATGATTTACCCTGAGCC..................................................................2311.001.00-----1.00-------------------------------------------------------------------------------
.............CTGTCACCTTCTGTGACCTGGATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--------------------1.00----------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGGGCTGGGCTCTAGGG.............................................................................................2311.001.00--------------------------------------------------------------------------1.00----------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAGCCCACTTTCTCTCCA.....................................................2111.001.00-------------------------------------------------1.00-----------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................TGGGGAATGGGGGAATGGTAA...............................................................................................................................................................................211.000.00-----------------------------1.00-------------------------------------------------------
.....................................CACAGGAAAGAAAGTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------1.00------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CCCTCCCAGGGACTCAGTGCC.............................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------------------------------------1.00--------
...............................................................................................................................................................................................................................................................................................................................................................................GCATCTGTGTGATCTTGGG.................................................................................................................................................................................................................1920.500.50--------------------------------------------------------------------------------0.50----
.........AACACTGTCACCTTCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.500.50---0.50---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGAAAGTACGATGA...............................................................................1820.500.50------------------------0.50------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAGCCCACTTTCTC.........................................................1920.500.50---------------------------------------------------------------------------------0.50---
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGGGCTGGGCTC..................................................................................................1730.330.33-------------------------0.33-----------------------------------------------------------
......................TCTGTGACCTGGATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1630.330.33--------------------------------------------------------------------------------0.33----
.........AACACTGTCACCTTCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1740.250.25-----------0.25-------------------------------------------------------------------------
.........AACACTGTCACCTTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1650.200.20-----------0.20-------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CATCTGTGTGATCTTGGGC................................................................................................................................................................................................................1960.170.17--------------------------0.17----------------------------------------------------------

Antisense strand
TACCCTCTCAACACTGTCACCTTCTGTGACCTGGATCCACAGGAAAGAAAGTAAGTCTCTTGTACACAGCTTCTCTCCCACACAGCTTTCTAACACTGACGTCTGTGTGGGTGCATGCATGTGCATGTGTGTGTGTGTGTGTGTGCATGTGCATACATTCTCCATTCAGCTGGAAGGTCTGCCCATGTGTGAGTAATCGTGTTGGGCATCTTTTGAGTCTTTCCCACTATAGATATGGAGACCCTCCCAGGGACTCAGTGCCCACTGCTACCCCCTCTGCCATGCCCTGACCTTGAATCTGCTTCTCCTCTCCATGATGGGGAGAGCCCCTCAGGAGGCAGGCTGCAGTGTTCTCTCGACCTTGAATGCATCTGTGTGATCTTGGGCAGCTCCTGTCCCTGGGGAATGGGGGAATGGGGGAATGAGGGGGGAATGGGGGGCAGCTCCTCTCCCCAGACCTTCCTGCAGAGGGTCTGGGCATGGGTGGGGCTGGGCTCTAGGGAGAAAGTACGATGATTTACCCTGAGCCCACTTTCTCTCCACAGGTGGATGAAAACAGAGGGTGGTGCCCCTGCTAAGTAAGTGTGACTTCTTA
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................(((((...(((.((((.(((((((.((((.(((..........))).)))))))))))))))))).)).)))..................................................
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................473.....................................................................545................................................
SizePerfect hitTotal NormPerfect NormSRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
TAX577580(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040037(GSM532922)
G243T. (cervix)
TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577743(Rovira)
total RNA. (breast)
SRR189782SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040016(GSM532901)
G645N. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532874(GSM532874)
G699T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR040038(GSM532923)
G531N. (cervix)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR343337SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040029(GSM532914)
G026T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
.........................................................................TCTCCCACACAGCTTTTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 194.000.00------------2.00------2.00-----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................ACTGCTACCCCCTCTTCTA......................................................................................................................................................................................................................................................................................................................... 192.000.00--2.00----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................CTACCCCCTCTGCCAAAT...................................................................................................................................................................................................................................................................................................................... 182.000.00-----------------------------------------------------------------1.00-------------1.00-----
.................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTCCTGTCCCTAACG............................................................................................................................................................................................... 191.000.00------------------------1.00------------------------------------------------------------
.......................................................................................................................................................................................................................................................................ACTGCTACCCCCTCTTCTT......................................................................................................................................................................................................................................................................................................................... 191.000.00--1.00----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCCCATTCCCCCCTC.......................................................................................................................................................... 1811.001.00---------------------------------------------------1.00---------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGGGGAATGGGGGGCCT........................................................................................................................................................ 201.000.00-------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................TCTGCCATGCCCTGAACT.............................................................................................................................................................................................................................................................................................................. 181.000.00---------------1.00---------------------------------------------------------------------
...................................................................................................................................................................................................................................................................GCCCACTGCTACCCCCTTT............................................................................................................................................................................................................................................................................................................................. 191.000.00----------------------------------------------------------------1.00--------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGGGGAATGGGGGGCCTC....................................................................................................................................................... 211.000.00-------1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................TCCTGAGGGGCTCTCCC................................................................................................................................................................................................................................................................... 1711.001.00------------------------------------------------1.00------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAGCTCCTCTCCCAA............................................................................................................................................ 181.000.00-------1.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................ACTGCTACCCCCTCTTC........................................................................................................................................................................................................................................................................................................................... 171.000.00--1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................TCTGCCATGCCCTGAACTT............................................................................................................................................................................................................................................................................................................. 191.000.00---------------------------------------------------------------------1.00---------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGGGGAATGGGGGGC.......................................................................................................................................................... 181.000.00---------------------------------------------------------------1.00---------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGGGGCTGGGCTCCAC............................................................................................... 191.000.00----------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGGGGAATGGGGGGCTC........................................................................................................................................................ 201.000.00------------------------------------------------------------1.00------------------------
...........................................................................................................................................................................................................................................................................CTACCCCCTCTGCCATAAT..................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------------------------------1.00----------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGGGGAATGGGGGGCC......................................................................................................................................................... 191.000.00--------------------------------------------1.00----------------------------------------
.............................................................................................................................................................................................................................................................................................................................................GGAGGCAGGCTGCAGTCGGG.................................................................................................................................................................................................................................................. 201.000.00--------------------------------------------------------1.00----------------------------
.......................................................................................................................................................................................................................................................................ACTGCTACCCCCTCTTCT.......................................................................................................................................................................................................................................................................................................................... 181.000.00--1.00----------------------------------------------------------------------------------
..............................................................................................................................................TGTATGCACATGCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1501.001.00---------------------------------------1.00---------------------------------------------
.................................................................................................................................................................................................................................................................................CCTCTGCCATGCCCTGAGGG.............................................................................................................................................................................................................................................................................................................. 201.000.00--------------------------1.00----------------------------------------------------------
.................................................................................................................................................................CCTTCCAGCTGAATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................. 1620.500.50----------------------------------------------------------------------------------0.50--
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCCCATTCCCCCC.......................................................................................................................................................... 1640.250.25-----------------------------------------------------------------------------------0.25-
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCCCATTCCCCC.......................................................................................................................................................... 1590.110.11------------------------------------------------------------------------------------0.11