ID: uc002vez.2_intron_13_0_chr2_216247049_r.3p
GENE: (5)
chr2:216246999-216247248-


(3)
BREAST 		(6)
CELL-LINE 		(1)
CERVIX 		(6)
HEART 		(14)
LIVER 		(1)
OTHER 		(5)
SKIN

Sense strand
CACTCCCATATGGTAATTTGTATTAGCAATGAACAGGTTTGTCCAAGAGGAAATCAAAGTCTGACTCTCCATATTTTTGTTACAATTCTGCAAATAAAAATTCTAGGCCACCATATGTTTACTACCAAACTCTAGACGCCACTTGAGGACTTTATAGTGGATGACGTGGATGTTGCATTTGCTTTTCACTCCCTTTGCAGATCAAACAGAAATGACTATTGAAGGCTTGCAGCCCACAGTGGAGTATGTG
...........................................................................................................((((....(((((((((.....(((.((......)).))).......)))))))))..)))).................................................................................
..........................................................................................91................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577745(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM359187(GSM359187)
HepG2_2pM_1. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
...............................................................................................AAAAATTCTAGGCCATATA........................................................................................................................................1951.000.00-36.00-15.00---------------------------------
................................................................................................................................................................................................................GAAATGACTATTGAAGGCTTGCA...................23135.0035.0015.00-6.00-9.00-3.00----2.00-------------------------
.................................................................................................................................................................................................................AAATGACTATTGAAGGCTTGCA...................22117.0017.003.00-2.00-5.002.002.001.00--1.00----1.00---------------------
....................................................................................................................................................................................................................TGACTATTGAAGGCTTGCA...................1919.009.004.00-2.00----1.001.00-----------------------1.00----
...............................................................................................AAAAATTCTAGGCCATA..........................................................................................................................................179.000.00-8.00-1.00---------------------------------
...............................................................................................................................................................................................................AGAAATGACTATTGAAGGCTTGCA...................2416.006.002.00----3.00------1.00------------------------
.................................................................................................................................................................................................................AAATGACTATTGAAGGCTTG.....................2016.006.001.00-1.00---1.001.00--1.00---1.00----------------------
..................................................................................................................................................................................................................AATGACTATTGAAGGCTTGCA...................2115.005.002.00-2.00---1.00------------------------------
...............................................................................................................................................................................................................AGAAATGACTATTGAAGGCTTG.....................2215.005.003.00----1.00------1.00------------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGCAGC.................2215.005.001.00----3.00-------------1.00-----------------
................................................................................................................................................................................................................GAAATGACTATTGAAGGCTTG.....................2115.005.00--3.00-1.00----------------------------1.00---
..................................................................................................................................................................................................................AATGACTATTGAAGGCTTGC....................2014.004.00-1.00-1.00-------2.00-------------------------
.................................................................................................................................................................................................................AAATGACTATTGAAGGCTT......................1914.004.001.00-------2.001.00---------------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTG.....................1813.003.001.00-------1.00-------1.00--------------------
............................................................................................................................................................................................................AACAGAAATGACTATTGAAGGCTT......................2413.003.001.00-2.00----------------------------------
...............................................................................................AAAAATTCTAGGCCATAT.........................................................................................................................................183.000.00-2.00-1.00---------------------------------
.................................................................................................................................................................................................................AAATGACTATTGAAGGCTTGCAGC.................2413.003.001.00-------------1.00-------1.00--------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGCA...................2013.003.00--2.00---1.00------------------------------
..................................................................................................................................................................................................................AATGACTATTGAAGGCTTG.....................1913.003.00-------1.00-1.001.00--------------------------
................................................................................................................................................................................................................GAAATGACTATTGAAGGCTTGCAGCC................2613.003.002.00-1.00----------------------------------
................................................................................................................................................................................................................GAAATGACTATTGAAGGC........................1812.002.00--1.00--1.00-------------------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGC....................1912.002.00--1.00-----------1.00----------------------
....................................................................................................................................................................................................................TGACTATTGAAGGCTTGCAGCC................2212.002.00------------------2.00------------------
............................................................................................................................................................................................................AACAGAAATGACTATTGAAGGCTTGCA...................2712.002.001.00------------1.00-----------------------
................................................................................................................................................................................................................GAAATGACTATTGAAGGCTT......................2012.002.00--2.00----------------------------------
............................................................................................................................................................................................................AACAGAAATGACTATTGAAGGCTTGC....................2612.002.00----2.00--------------------------------
..................................................................................................................................................................................................................AATGACTATTGAAGGCTTGCAG..................2212.002.00--------------------1.00--1.00-------------
............................................................................................................................................................................................................AACAGAAATGACTATTGAAGGCTTG.....................2512.002.001.00------------1.00-----------------------
...............................................................................................................................................................................................................AGAAATGACTATTGAAGGCTT......................2112.002.001.00------1.00-----------------------------
...............................................................................................................................................................................................................AGAAATGACTATTGAAGG.........................1812.002.00--1.00-----------------------1.00----------
..................................................................................................................................................................................................................AATGACTATTGAAGGCTTGCAGC.................2312.002.00--------1.00-1.00--------------------------
.............................................................................................................................................................................................................ACAGAAATGACTATTGAAGGC........................2111.001.00---------1.00---------------------------
......................................................................................................................................................................................................................ACTATTGAAGGCTTGCAGCCCACAGTGGAGTATGTG3611.001.00-------------------------1.00-----------
...................................................................................................................................................GACTTTATAGTGGATGACGTGGATGTT............................................................................2711.001.00---1.00---------------------------------
............................................................................................................................................................................................................AACAGAAATGACTATTGAAGGCT.......................2311.001.001.00------------------------------------
....................................................................................................................................................................................................................TGACTATTGAAGGCTTGCAG..................2011.001.00-1.00-----------------------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGCAGCCCACA............2711.001.001.00------------------------------------
...........................................................................................................................................................................................................AAACAGAAATGACTATTGAAGGCTTGCA...................2811.001.001.00------------------------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGCAGCA................2311.005.00------------1.00------------------------
..........................................................................................................................................................................................................CAAACAGAAATGACTATTGAAGGCTTGC....................2811.001.00-1.00-----------------------------------
.................................................................................................................................................AGGACTTTATAGTGGATGACGTGG.................................................................................2411.001.00----------------------------1.00--------
......................................................................................................................................................................................................................ACTATTGAAGGCTTGCAGCCCATA............241.000.00---------------1.00---------------------
.......................................................................................................................................................................................................................CTATTGAAGGCTTGCAGCCCATA............231.000.001.00------------------------------------
................................................................................................................................................................................................................GAAATGACTATTGAAGGCTTGC....................2211.001.00--1.00----------------------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGCAGCCCAAA............2711.001.00---------------------1.00---------------
....................................................................................................................................TAGACGCCACTTGAGGACTTT.................................................................................................2111.001.001.00------------------------------------
.........................................................................................................................................................................................................TCAAACAGAAATGACTATTGAAGGCTTGCA...................3011.001.00------------------------1.00------------
........................................................................................................AGGCCACCATATGTTTACT...............................................................................................................................1911.001.00--1.00----------------------------------
.................................................................................................................................................................................................................AAATGACTATTGAAGGCTTGTA...................2211.006.00------------1.00------------------------
.......................................................................................................................................................................................................GATCAAACAGAAATGACTATTGAAGG.........................2611.001.00---1.00---------------------------------
.............................................................................................................................................................................................................ACAGAAATGACTATTGAAGGCTTG.....................2411.001.00-----1.00-------------------------------
...........................................................................................................................................................................................................................TGAAGGCTTGCAGCCCACAGTGGAGT.....2611.001.00-----------------1.00-------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGCAGCCCA..............2511.001.00----1.00--------------------------------
.................................................................................................................................................................................................................AAATGACTATTGAAGGCT.......................1811.001.00---------------1.00---------------------
.................................................................................................................................................................................................................AAATGACTATTGAAGGCTTT.....................2011.004.00-----1.00-------------------------------
...........................................................................................................................................................................................................AAACAGAAATGACTATTGAAGGCTTGCAG..................2911.001.001.00------------------------------------
...........................................................................................................................................................................................................AAACAGAAATGACTATTGAAGGC........................2311.001.001.00------------------------------------
............................................................................................................................................................................................................AACAGAAATGACTATTGAAGGCTTGCAGCC................3011.001.001.00------------------------------------
.............................................................................................................................................................................................................................AAGGCTTGCAGCCCACAGTGGAGTA....2511.001.001.00------------------------------------
...................................................................................................................TGTTTACTACCAAACTCTAGACGCCACT...........................................................................................................2811.001.00---1.00---------------------------------
...............................................................................................................................................................................................................AGAAATGACTATTGAAGGCTTGCAGCCCA..............2911.001.001.00------------------------------------
.................................................................................................................................................................................................................AAATGACTATTGAAGGCTTGC....................2111.001.00---------1.00---------------------------
................................................................................................................................................................................................................GAAATGACTATTGAAGGCT.......................1911.001.00--1.00----------------------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGCAGCCC...............2411.001.00----------------1.00--------------------
.................................................................................................................................................................................................................AAATGACTATTGAAGGCGTG.....................201.000.001.00------------------------------------
.............................................................................................................................................................................................................ACAGAAATGACTATTGAAGGCT.......................2211.001.00--1.00----------------------------------
.......................................................................................................................................................................................................................CTATTGAAGGCTTGCAGCCCACA............2311.001.001.00------------------------------------
..........................................................................................................................................................................................................CAAACAGAAATGACTATTGAAGGC........................2411.001.00--1.00----------------------------------
..............................................................................................................................AAACTCTAGACGCCACTTGAGGACTTTA................................................................................................2811.001.001.00------------------------------------
......................................................................................................................................................................................................................ACTATTGAAGGCTTGCAG..................1811.001.00---1.00---------------------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGCAGCCCACAG...........2811.001.00----------------1.00--------------------
................................................................................................................................................................................................................GAAATGACTATTGAAGGCTTGCAGC.................2511.001.00----1.00--------------------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGCTTGCAG..................2111.001.00--1.00----------------------------------
............................................................................................................................................................................................................AACAGAAATGACTATTGAAGGCTTGCAG..................2811.001.00-------------1.00-----------------------
.......................................................................................................................................................TTATAGTGGATGACGTGGATGTT............................................................................2311.001.00------------------------------1.00------
............................................................................................................................................................................................................AACAGAAATGACTATTGAAGGCTTGCAGC.................2911.001.001.00------------------------------------
............................................................................................................................................................................................................................GAAGGCTTGCAGCCCACAGT..........2011.001.00--1.00----------------------------------
..................................................................................................................................................................................................................................TTGCAGCCCACAGTGGAG......1811.001.00---------------------------1.00---------
...............................................................................................................................................................................................................AGAAATGACTATTGAAGGCT.......................2011.001.00-------1.00-----------------------------
.....................................................................................................................TTTACTACCAAACTCTAGACGC...............................................................................................................2211.001.00-------------------------------1.00-----
.......................................................................................................................................................................................................GATCAAACAGAAATGACT.................................1811.001.00-----------------1.00-------------------
...................................................................................................................................................................................................................ATGACTATTGAAGGC........................1540.500.50-0.25----------------------------------0.25
............................................................................................................................................................GTGGATGACGTGGAT...............................................................................1530.330.33-----------------------------------0.33-
........................................................................................................................................................................................................................TATTGAAGGCTTGCAG..................1650.200.20-----------------0.20-------------------

Antisense strand
CACTCCCATATGGTAATTTGTATTAGCAATGAACAGGTTTGTCCAAGAGGAAATCAAAGTCTGACTCTCCATATTTTTGTTACAATTCTGCAAATAAAAATTCTAGGCCACCATATGTTTACTACCAAACTCTAGACGCCACTTGAGGACTTTATAGTGGATGACGTGGATGTTGCATTTGCTTTTCACTCCCTTTGCAGATCAAACAGAAATGACTATTGAAGGCTTGCAGCCCACAGTGGAGTATGTG
...........................................................................................................((((....(((((((((.....(((.((......)).))).......)))))))))..)))).................................................................................
..........................................................................................91................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577745(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM359187(GSM359187)
HepG2_2pM_1. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
...................................................................................................TAAACATATGGTGGCCTAGAAT................................................................................................................................. 2211.001.00----------------------------------1.00--
.......................................................................................................................................................................................TTTCACTCCCTTTGCGTGA................................................ 191.000.00-----------------------------1.00-------