ID: uc002vex.3_intron_5_0_chr2_216190862_f.3p
GENE: (6)
chr2:216191345-216191594+


(1)
AGO2.ip 		(3)
B-CELL 		(2)
BRAIN 		(4)
BREAST 		(6)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(5)
LIVER 		(6)
OTHER 		(4)
SKIN 		(1)
UTERUS

Sense strand
AAAGATTGAAAAAGAATTGGAAAGGGGTAATTTGTTGGGCCATTCAGTGCTTTGCTGTCATTCATGGTGTCATCGTGTTGTGCAGCCACCACATAGCACTGAATAGTGAGGAGATGTTGTTTGCTGTGGACGTAGAAAACCATCTTGTCCCCACTTTGGAAAGTGCTGCTCGTGTCTCACAAAACTTACGCTTTTTGTAGGCATTCACTCATACGGCACAATATGATGAAGCAATTTCAGATTATTTCAG
...........................................................................................................((.((((((...(((((.......)))))....)))))).)).((.....))...(((..((....))..)))......................................................................
..........................................................................................................107.......................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189786SRR189784SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...............................................................................................................................................................AAAGTGCTGCTCGTGCAG.........................................................................1819.000.008.002.004.001.00-1.00-2.00-------1.00-----------------
...............................................................................................................................................................AAAGTGCTGCTCGTGCAGG........................................................................1917.000.007.008.001.00--------1.00---------------------
..............................................................................................................................................................GAAAGTGCTGCTCGTGCAG.........................................................................196.000.004.002.00-------------------------------
.........................................................................................................................................................................................................CATTCACTCATACGGCACAAT............................2112.002.00---2.00-----------------------------
.........................................................................................................................................................................................................CATTCACTCATACGGCACAATATG.........................2412.002.00---1.00-1.00---------------------------
....................................................................................................................................................................................................................ACGGCACAATATGATGAA....................1812.002.00--------2.00------------------------
.......................................................................................................................................................................................................................................CAATTTCAGATTATTTCA.1812.002.00----------2.00----------------------
.....................................................................................................................................................................................................TAGGCATTCACTCATACGGCACAAAA...........................261.000.00-----------------1.00---------------
.........................................................................................................................................................................................................CATTCACTCATACGGCACA..............................1911.001.00--1.00------------------------------
.............................................................................................................................................................................................................CACTCATACGGCACAATATGATGA.....................2411.001.00----1.00----------------------------
...............................................................................................................................................................AAAGTGCTGCTCGTGCCG.........................................................................181.000.00-1.00-------------------------------
....................AAAGGGGTAATTTGTAT.....................................................................................................................................................................................................................171.000.00--------------1.00------------------
.....................................................................................................................................................................................................................CGGCACAATATGATG......................1511.001.00---------------------------1.00-----
..............................................................................................................................................................GAAAGTGCTGCTCGTGCAGG........................................................................201.000.001.00--------------------------------
...............................................................................................................................................................AAAGTGCTGCTCGTGAAGG........................................................................191.000.001.00--------------------------------
....................................................................................................................................................................................................................ACGGCACAATATGATGAAGCAA................2211.001.00-------------1.00-------------------
...............................................................................................................AGATGTTGTTTGCTGTGGACGTA....................................................................................................................2311.001.00----------------------------1.00----
..................................................................................................................................................................................................................ATACGGCACAATATGATGAA....................2011.001.00---------1.00-----------------------
............................................................................................................................TGTGGACGTAGAAAACTG............................................................................................................181.000.00--1.00------------------------------
......................................................................................................................................................................................................AGGCATTCACTCATACGGC.................................1911.001.00------1.00--------------------------
......................................................................................................ATAGTGAGGAGATGTTGTTT................................................................................................................................2011.001.00---------1.00-----------------------
..............................................................................................................................................................GAAAGTGCTGCTCGTGCCGG........................................................................201.000.001.00--------------------------------
............................................................................................................AGGAGATGTTGTTTGCTGTGG.........................................................................................................................2111.001.00----------------1.00----------------
........................................................................................................................................................................................................................CACAATATGATGAAGCAATTTCAG..........2421.001.00-------------------------1.00-------
...............................................................................................................................................................AAAGTGCTGCTCGTGCA..........................................................................171.000.00----------------------1.00----------
...................................................................................................................................................................................................................TACGGCACAATATGATGAAG...................2011.001.00------------1.00--------------------
....................................................................................................................................................................................................................ACGGCACAATATGATGAAG...................1911.001.00--------------------------1.00------
...............................................................................................................................................................AAAGTGCTGCTCGTGC...........................................................................161.000.001.00--------------------------------
....................................................................................................................................................................................................................ACGGCACAATATGATGAAGC..................2011.001.00----1.00----------------------------
............................................................................................................AGGAGATGTTGTTTGCTTT...........................................................................................................................191.000.00-----------1.00---------------------
........................................................................................................................TTGCTGTGGACGTAGAAAACC.............................................................................................................2111.001.00------------------1.00--------------
....................................................................................................................................................................................................................ACGGCACAATATGATGAAGCA.................2111.001.00--------------------1.00------------
..............................................................................................................................................................GAAAGTGCTGCTCGTTCAG.........................................................................191.000.001.00--------------------------------
...................................................................................AGCCACCACATAGCAGAC.....................................................................................................................................................181.000.00------------------------------1.00--
..................................................................................................................................................................................................................ATACGGCACAATATGATGAAGCA.................2311.001.00---------------------1.00-----------
....................................................................................................................................................................................................................................AAGCAATTTCAGATTATTTCGGGA241.000.00-----------------------------1.00---
..............................................................................................................................................................GAAAGTGCTGCTCGTGCGC.........................................................................191.000.00-------------------1.00-------------
...................................................................................................................................................................................................TGTAGGCATTCACTCATACGGCACA..............................2511.001.00------1.00--------------------------
..............................................................................................................................TGGACGTAGAAAACC.............................................................................................................1511.001.00-----------------------1.00---------
.....................................................................................................AATAGTGAGGAGATG......................................................................................................................................1560.170.17--------------------------------0.17

Antisense strand
AAAGATTGAAAAAGAATTGGAAAGGGGTAATTTGTTGGGCCATTCAGTGCTTTGCTGTCATTCATGGTGTCATCGTGTTGTGCAGCCACCACATAGCACTGAATAGTGAGGAGATGTTGTTTGCTGTGGACGTAGAAAACCATCTTGTCCCCACTTTGGAAAGTGCTGCTCGTGTCTCACAAAACTTACGCTTTTTGTAGGCATTCACTCATACGGCACAATATGATGAAGCAATTTCAGATTATTTCAG
...........................................................................................................((.((((((...(((((.......)))))....)))))).)).((.....))...(((..((....))..)))......................................................................
..........................................................................................................107.......................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189786SRR189784SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.........................................................................................................................................................................................................................ACAATATGATGAAGCAATAG............. 201.000.00------------------------1.00--------
.......GAAAAAGAATTGGAATGCA................................................................................................................................................................................................................................ 191.000.00-------------------------------1.00-