ID: uc002veg.1_intron_14_0_chr2_212537983_r.5p
GENE: ERBB4(13)
chr2:212543577-212543826-


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(7)
AGO2.ip
(2)
AGO3.ip
(8)
B-CELL
(5)
BRAIN
(3)
BREAST
(44)
CELL-LINE
(2)
CERVIX
(3)
HEART
(5)
HELA
(3)
LIVER
(2)
OTHER
(9)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
CGCTTCAGTAGAGGAAGGATCTGCATAGAGTCTTGTAACCTCTATGATGGGTAAGGCTTCTTCTAGGGTTGCCTTCACCTCATGAGCTTTGAAGGACTGATTAGTTCTGATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCTGGCTGGAGTGCAGCGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTTGGCCTCCCAAGTAGCT
.......................................................................................................((..((............................(((((((.....))))))).....(((((((((((....))))..)).)))))))..))......................................................
......................................................................................................103..............................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR189783SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR029127(GSM416756)
A549. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105752CONTROL(GSM1105752)
small RNA sequencing data. (hela)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGAA.................................................2474.000.00---27.0017.005.009.00-3.004.001.00--------------------------------------1.001.00---------1.001.00----1.001.00----------1.00----1.00--------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGT..................................................2329.000.00--21.00----2.001.00---3.00----1.00---------------------------------------------------------------------1.00----
................................................................................................................................................................................GCACGATCTCGGCTCACTGCAT....................................................2212.000.00--8.00----2.00------1.00---------------------------------1.00-------------------------------------------
..................................................................................................................................................................................ACGATCTCGGCTCACTGCAAGT..................................................2211.000.00--11.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCT.....................................................219.000.00--8.00--------------------------------1.00--------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCTA....................................................227.000.00--6.00------1.00----------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGTA.................................................247.000.00--1.005.00-------------------------------1.00--------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGTAA................................................255.000.00---------------5.00----------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCTA....................................................215.000.00--5.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCATAAG.................................................255.000.00---5.00----------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGAG.................................................244.000.00---1.003.00---------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCAAGAA.................................................254.000.00---3.00-------------1.00--------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCTGA...................................................224.000.00---4.00----------------------------------------------------------------------------------------
..............................................ATGGGTAAGGCTTCTGACT.........................................................................................................................................................................................194.000.00--------------------------1.00-------------------1.00----------------------------1.00-1.00--------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCGGG...................................................................................................................283.000.003.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCAAGAAAT...............................................273.000.00----------3.00---------------------------------------------------------------------------------
..............................................ATGGGTAAGGCTTCTGAAA.........................................................................................................................................................................................193.000.00----------------------1.00------------------------1.00----------1.00---------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCGAG..................................................................................................................293.000.003.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGTAT................................................253.000.00-------------------------------2.00------------------------------------------1.00-----------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGAC.................................................243.000.00-----------3.00--------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCACTT..................................................243.000.00--3.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAT....................................................212.000.00-------1.00-------------1.00----------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGAAA................................................252.000.00---1.00-----1.00----------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCATAAG.................................................242.000.00------2.00-------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGC.........................................................................232.000.001.001.00------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCAAGTA.................................................252.000.00---2.00----------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCAAGATT................................................262.000.00---2.00----------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGAAG................................................252.000.00-------1.00--------------------------------1.00---------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGATA................................................252.000.00---2.00----------------------------------------------------------------------------------------
........................................................................................................................................................................................TCGGCTCACTGCAAGCTCCGCCTCCTGGCTC...................................312.000.002.00-------------------------------------------------------------------------------------------
............................................................................................................................................................................................CTCACTGCAAGCTCCGCCTCCTGGGTCCC.................................292.000.002.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCATGA..................................................232.000.00--1.00----------------------------------1.00------------------------------------------------------
....TCAGTAGAGGAAGGATCT....................................................................................................................................................................................................................................1812.002.00-----------------------2.00--------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGGTGTG.....................................................................272.000.002.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCATAAT.................................................252.000.00----------------------2.00---------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCAAGAAA................................................262.000.00---1.00----1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................................AAGCTCCGCCTCCTGGGTTCACGCCCTCC.........................292.000.002.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCTTTT..................................................232.000.00-----2.00--------------------------------------------------------------------------------------
........................................................................................................................................................................................TCGGCTCACTGCAAGCTCCGCCTCCTGGGGC...................................312.000.00-2.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................TCGGCTCACTGCAAGCTCCGCCGGGG........................................262.000.00-2.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCT.....................................................202.000.00--1.00-----------1.00-----------------------------------------------------------------------------
............................................................................................................................................................................AGCGGCACGATCTCGGCTCACTC.......................................................232.000.00-2.00------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCGAG...................................................................................................................282.000.001.001.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................ATCTCGGCTCACTGCAAGCTCCGCCGACC........................................292.000.002.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGGCACG.....................................................................2712.002.002.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTTCA.....................................................212.000.00--2.00-----------------------------------------------------------------------------------------
........................................................................................................................................................................................TCGGCTCACTGCAAGCTCCGCCTCCTGGACTC..................................322.000.00-2.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCACAA..................................................232.000.00---2.00----------------------------------------------------------------------------------------
................................................................................................................................................................TGGCTGGAGTGCAGCGGCACG.....................................................................2131.331.330.670.33--------------0.33---------------------------------------------------------------------------
........................................................................................................TTCTGATTTTTTTTTTTTTTTTTTTTCGGT....................................................................................................................301.000.001.00-------------------------------------------------------------------------------------------
..............................................................................................................................................................CCTGGCTGGAGTGCAGCGGCAGCG....................................................................241.000.001.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAC....................................................211.000.00---------1.00----------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCGGC...................................................................................................................281.000.001.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................CTGGCTGGAGTGCAGCGGCACCATA..................................................................251.000.00-------------------------1.00------------------------------------------------------------------
............................................................................................................................................................................AGCGGCACGATCTCGGCTCACTTC......................................................241.000.00-1.00------------------------------------------------------------------------------------------
..............................................ATGGGTAAGGCTTCTGACA.........................................................................................................................................................................................191.000.00-----------------------------------------------------------------1.00--------------------------
..........................................................................................................CTGATTTTTTTTTTTTTTTTTTTTTTTTTCGA................................................................................................................321.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCTAG...................................................................................................................281.000.00-1.00------------------------------------------------------------------------------------------
.......GTAGAGGAAGGATCTGCATAGAG............................................................................................................................................................................................................................2311.001.00------------------------------------------------------1.00-------------------------------------
.....................................................................................................................................................................................ATCTCGGCTCACTGCAAGCTCCGCCTCATGC......................................311.000.001.00-------------------------------------------------------------------------------------------
.............................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGAAGCT.............................................................................................................321.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCATAT..................................................241.000.00-----------------------------------------------------------1.00--------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTCTGG.......................................................................................................................241.000.00-1.00------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CGGCTCACTGCAAGCTCCGCCTCCTGGACAC..................................311.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTCGC........................................................................................................................231.000.00-1.00------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCCAGC..................................................241.000.00------------1.00-------------------------------------------------------------------------------
........................................................................................................................................................................................TCGGCTCACTGCAAGCTCCGCCTCCTGGCGGG..................................321.000.001.00-------------------------------------------------------------------------------------------
.........................................................................................................................................................................TGCAGCGGCACGATCTCGGCTCACG........................................................251.000.00-1.00------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCACAAA.................................................251.000.00--------------------------------1.00-----------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCAGC...................................................................................................................281.000.00-1.00------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCC.....................................................211.000.00------------1.00-------------------------------------------------------------------------------
..........................................................................................................CTGATTTTTTTTTTTTTTTTTTTTTACG....................................................................................................................281.000.00---------------------------1.00----------------------------------------------------------------
..................................................................................................................................................................................ACGATCTCGGCTCACTGCAAGGT.................................................231.000.00--1.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................................GCAGCGGCACGATCTCGGCTCACTGTC.....................................................271.000.00-1.00------------------------------------------------------------------------------------------
........................................................................................................TTCTGATTTTTTTTTTTTGTTC............................................................................................................................221.000.00------------------1.00-------------------------------------------------------------------------
...............................................................................................................................................................................................ACTGCAAGCTCCGCCTCCTGGGGGAC.................................261.000.001.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCGGCTCACTGCAAGCTAAA..............................................221.000.00--------------------------------------------------------1.00-----------------------------------
.......................................................................................................................................................CTGTCGCCCTGGCTGGAGTG...............................................................................2001.001.00---------------------------------------------------------------1.00----------------------------
...............................................................................................................................................................................................ACTGCAAGCTCCGCCTCCTGGGGC...................................241.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCGGG..................................................................................................................291.000.001.00-------------------------------------------------------------------------------------------
........................................................................................................................................................................................................TCCGCCTCCTGGGTTCACGGGC............................221.000.00------------------------1.00-------------------------------------------------------------------
......................................................................................................................................................................................TCTCGGCTCACTGCAAGCTCCGCCTCCTGGAC....................................321.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGGCGGG.....................................................................271.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCCCG...................................................231.000.00----------------------------------------------------------------------------------1.00---------
.............................................................................................................................TTTTTTTTTTGAGACGGAGTCTCGCGGTG................................................................................................291.000.00-1.00------------------------------------------------------------------------------------------
........................................................................................................TTCTGATTTTTTTTTTTTTTTAACT.........................................................................................................................251.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTAATC...................................................................................................................281.000.00---------------------------------------------------------------------------------1.00----------
.......GTAGAGGAAGGATCTGCA.................................................................................................................................................................................................................................1811.001.00-------------------------------------------1.00------------------------------------------------
............................................................................................................................................................................................CTCACTGCAAGCTCCGCCTCCTGGGGC...................................271.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCTGC...................................................................................................................281.000.00-1.00------------------------------------------------------------------------------------------
.............................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGAATTT.............................................................................................................321.000.00-------------1.00------------------------------------------------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTTCACCTTC............................281.000.00------------------------------------1.00-------------------------------------------------------
........................................................................................................................................................................................TCGGCTCACTGCAAGCTCCGCCTCCTGGATCC..................................321.000.001.00-------------------------------------------------------------------------------------------
.............................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGAACGG.............................................................................................................321.000.001.00-------------------------------------------------------------------------------------------
....................................................................................................................................TTTGAGACGGAGTCTCGCGCCG................................................................................................221.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTTGGAGG..............................................................................................................331.000.001.00-------------------------------------------------------------------------------------------
......................................................................................................AGTTCTGATTTTTTTTTTTTTTTTTTTTTTCCC...................................................................................................................331.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTTGGGGC..............................................................................................................331.000.001.00-------------------------------------------------------------------------------------------
............................................................................................................GATTTTTTTTTTTTTTTTTTTTTTTTTGAGGGA.............................................................................................................331.000.001.00-------------------------------------------------------------------------------------------
.............................................................................................................................................................................GCGGCACGATCTCGGCTCAGC........................................................211.000.001.00-------------------------------------------------------------------------------------------
.....CAGTAGAGGAAGGATCTGCATA...............................................................................................................................................................................................................................2211.001.00-----------------------1.00--------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGGCGTG.....................................................................271.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTACGG...................................................................................................................281.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCTT...................................................................................................................281.000.001.00-------------------------------------------------------------------------------------------
........................................................................................................................................................TGTCGCCCTGGCTGGAGTGCAGCGGCGTG.....................................................................291.000.001.00-------------------------------------------------------------------------------------------
.............................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGTTC...............................................................................................................301.000.001.00-------------------------------------------------------------------------------------------
.........................................................................................................TCTGATTTTTTTTTTTTTTTTCTTC........................................................................................................................251.000.00-1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................ACGATCTCGGCTCACTGCATTA..................................................221.000.00----------------1.00---------------------------------------------------------------------------
........................................................................................................TTCTGATTTTTTTTTTTTTTTTTAG.........................................................................................................................251.000.00-1.00------------------------------------------------------------------------------------------
.........................................................................................................TCTGATTTTTTTTTTTTTTTTCTTG........................................................................................................................251.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCTC...................................................................................................................281.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTCGAG................................................................................................................311.000.00-1.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................ACTGCAAGCTCCGCCTCCGG.......................................201.000.00--------------------------------------------------------------------1.00-----------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTCAGG................................................................................................................311.000.001.00-------------------------------------------------------------------------------------------
.....CAGTAGAGGAAGGATCTGCA.................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------1.00-----
........................................................................................................................................................................................TCGGCTCACTGCAAGCTCCGCCTCCTGGGTAA..................................321.000.00-1.00------------------------------------------------------------------------------------------
.........................................................................................................TCTGATTTTTTTTTTTTTTTTTTTTTTCGAG..................................................................................................................311.000.00-1.00------------------------------------------------------------------------------------------
...................................................................................................................................TTTTGAGACGGAGTCTCGCGCA.................................................................................................221.000.00-1.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCATAGA.................................................241.000.00------------------------------------------------------------------------------------------1.00-
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTTGGGAC..............................................................................................................331.000.001.00-------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................AGCTCCGCCTCCTGGGTTCACGCCCCTC.........................281.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCACAA..................................................241.000.00---------------------------------------------------------------------1.00----------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCCA....................................................221.000.00---------------------------------1.00----------------------------------------------------------
..........................................................................................................................................ACGGAGTCTCGCTCTGTCGCCCTGGCCGG...................................................................................291.000.00-1.00------------------------------------------------------------------------------------------
..............................................................................................................................................AGTCTCGCTCTGTCGCCCTGGCTGGTG.................................................................................271.000.00-1.00------------------------------------------------------------------------------------------
..........................................................................................................CTGATTTTTTTTTTTTTTTTTTTTTTTTAATT................................................................................................................321.000.00---------------------------1.00----------------------------------------------------------------
.........................................................................................................TCTGATTTTTTTTTTTTTTTTTTTTTTTAAA..................................................................................................................311.000.001.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................GCTGGAGTGCAGCGGCACGATCAGAG..............................................................261.000.00-1.00------------------------------------------------------------------------------------------
......................................................................................................AGTTCTGATTTTTTTTTTTTTTTTTGCC........................................................................................................................281.000.001.00-------------------------------------------------------------------------------------------
........................................................................................................................................................................................TCGGCTCACTGCAAGCTCCGCCTCCTGCAGC...................................311.000.00-------------------------1.00------------------------------------------------------------------
...........................................................................................................................................................................CAGCGGCACGATCTCGGCTCACGG.......................................................241.000.00-1.00------------------------------------------------------------------------------------------
..........................................................................................................CTGATTTTTTTTTTTTTTTTTTCATT......................................................................................................................261.000.00-1.00------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CGGCTCACTGCAAGCTCGGC.............................................201.000.00--------1.00-----------------------------------------------------------------------------------
.......................................................................................................................................................................................................CTCCGCCTCCTGGGTTCACGCTTG...........................241.000.00-------------1.00------------------------------------------------------------------------------
.......................................................................................................................................................................AGTGCAGCGGCACGATCTCGGCTCAACGC......................................................291.000.00-1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCCTGGGTTCACGCCATTGCAC......................221.000.00------------------------------1.00-------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTTGGAAC..............................................................................................................331.000.001.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................GATCTCGGCTCACTGCAAGCTAAGT.............................................251.000.00---1.00----------------------------------------------------------------------------------------
.............................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGAAGC..............................................................................................................311.000.001.00-------------------------------------------------------------------------------------------
............................................................................................................GATTTTTTTTTTTTTTTTTTTTTTTTTGAATA..............................................................................................................321.000.00----------------------------------------------------1.00---------------------------------------
...............................................................................................................................................................................................ACTGCAAGCTCCGCCTCCTCTC.....................................221.000.001.00-------------------------------------------------------------------------------------------
.........................................................................................................................................................................TGCAGCGGCACGATCTCGGCAC...........................................................221.000.00-1.00------------------------------------------------------------------------------------------
............................................................................................................................................................................................CTCACTGCAAGCTCCGCCTCCTGGGTCCG.................................291.000.00-------------1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................ATCTCGGCTCACTGCAAGCTCCGCCTCCAAGC.....................................321.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGCA........................................................................241.000.001.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................AGTGCAGCGGCACGATCTCGGCTCAGTTC......................................................291.000.00-1.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................GGCACGATCTCGGCTAAAG........................................................191.000.00-----------------------------------------------------------------------------------------1.00--
.................................................................................................................................................................................CACGATCTCGGCTCACTGCAAGCTT................................................251.000.00--1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................TCACTGCAAGCTCCGCCTCCTGGGGCGA.................................281.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGGCTGG.....................................................................271.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGGAG.......................................................................251.000.00-1.00------------------------------------------------------------------------------------------
............................................................................................................GATTTTTTTTTTTTTTTTTTTTTCTCC...................................................................................................................271.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCAG...................................................................................................................281.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCCTA...................................................231.000.00---------------------------------------------------------1.00----------------------------------
..............................................................................................................................................................................CGGCACGATCTCGGCTCACTGCAAGCA.................................................271.000.00-1.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCATGAA.................................................241.000.00--1.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCAC....................................................221.000.00--------------1.00-----------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGGCGCG.....................................................................271.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................CTGATTTTTTTTTTTTTTTTTTTTTCCC....................................................................................................................281.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................................................................CGCCCTGGCTGGAGTGCAGCGGCACG.....................................................................2611.001.001.00-------------------------------------------------------------------------------------------
........................................................................................................................................................................................TCGGCTCACTGCAAGCTCCGCCTCCTCTC.....................................291.000.001.00-------------------------------------------------------------------------------------------
......................................................................................................AGTTCTGATTTTTTTTTTTTTTTTTTTAT.......................................................................................................................291.000.00-------------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................ACTGCAAGCTCCGCCTCCTGGGTTCACGCCGC...........................321.000.001.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................ACGATCTCGGCTCACTGCAAGCTCCGCCCCGG........................................321.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCCA...................................................................................................................281.000.001.00-------------------------------------------------------------------------------------------
........................................................................................................................................................TGTCGCCCTGGCTGGAGTGCAGCGGCT.......................................................................271.000.001.00-------------------------------------------------------------------------------------------
........................................................................................................TTCTGATTTTTTTTTTTTTTTTTCGAG.......................................................................................................................271.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTCC..................................................................................................................291.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTCTC.................................................................................................................301.000.001.00-------------------------------------------------------------------------------------------
............................................................................................................................................................................................CTCACTGCAAGCTCCGCCTCCTGGGTCCTT................................301.000.00-------------1.00------------------------------------------------------------------------------
........................................................................................................................................................TGTCGCCCTGGCTGGAGTGCAGCGC.........................................................................251.000.00-1.00------------------------------------------------------------------------------------------
.............................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGACTGC.............................................................................................................321.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGGAGTG.....................................................................271.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTCGGC.......................................................................................................................241.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................TGGCTGGAGTGCAGCGGCAGGA....................................................................221.000.001.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................................TGCAAGCTCCGCCTCCTGGGTCCG.................................241.000.001.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................GAGTGCAGCGGCACGATCTCGGCTCACCTC......................................................301.000.001.00-------------------------------------------------------------------------------------------
............................................................................................................GATTTTTTTTTTTTTTTTTTTTTTTTCTTT................................................................................................................301.000.00-------------1.00------------------------------------------------------------------------------
............................................................................................................................................................................AGCGGCACGATCTCGGCTCACTGCG.....................................................251.000.001.00-------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTAAA..............231.000.00---------------------------------------------------1.00----------------------------------------
.............................................................................................................................................................................GCGGCACGATCTCGGCTCATA........................................................211.000.00-------------------------1.00------------------------------------------------------------------
......................................................................................................AGTTCTGATTTTTTTTTTTTTTTTTTTCC.......................................................................................................................291.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGCTG.......................................................................251.000.001.00-------------------------------------------------------------------------------------------
............................................................................................................................TTTTTTTTTTTGAGACGGAGTCTCGCGCCG................................................................................................301.000.00-1.00------------------------------------------------------------------------------------------
.........................................................................................................TCTGATTTTTTTTTTTTTTTTTCGGC.......................................................................................................................261.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................................................................CGCCCTGGCTGGAGTG...............................................................................1601.001.00-------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCACC...................................................221.000.00--------1.00-----------------------------------------------------------------------------------
..................................................GTAAGGCTTCTTCTAGTAGA....................................................................................................................................................................................201.000.00-----------------------------------------------------------------------1.00--------------------
............................................................................................................GATTTTTTTTTTTTTTTTTTTTTCCAC...................................................................................................................271.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................TGGCTGGAGTGCAGCGGCACGATCTAGG..............................................................281.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCGGCCGCT....................................................................281.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCTGCG.......................................................................251.000.001.00-------------------------------------------------------------------------------------------
....................................................................................................TTAGTTCTGATTTTTTTTAG..................................................................................................................................201.000.00--------------------------1.00-----------------------------------------------------------------
..............AAGGATCTGCATAGAGAAGG........................................................................................................................................................................................................................201.000.00--------------------------------------1.00-----------------------------------------------------
........................................................................................................................................................TGTCGCCCTGGCTGGAGTGCTGCG..........................................................................241.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................CTGATTTTTTTTTTTTTTTTTTTCGG......................................................................................................................261.000.001.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................ACGATCTCGGCTCACTGCAAGAA.................................................231.000.00------------------------------------------------------------------------------------1.00-------
...........................................................................................................TGATTTTTTTTTTTTTTTTTCTGC.......................................................................................................................241.000.001.00-------------------------------------------------------------------------------------------
............................................................................................................GATTTTTTTTTTTTTTTTTTTTTTTTTGAGGAT.............................................................................................................331.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCTATA..................................................241.000.00--------------1.00-----------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTACG....................................................................................................................271.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCACAG..................................................241.000.00------------------------1.00-------------------------------------------------------------------
.....................................................................................................................................................................................ATCTCGGCTCACTGCAAGCTCCGCCTCCGACG.....................................321.000.00-1.00------------------------------------------------------------------------------------------
.............................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGACTT..............................................................................................................311.000.00--------------------------------------1.00-----------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCACATA.................................................251.000.00-----------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................GCACGATCTCGGCTCACTGCATTT..................................................241.000.00-----------1.00--------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTTGTTC...............................................................................................................321.000.00-1.00------------------------------------------------------------------------------------------
.............................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGAAGGG.............................................................................................................321.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................TCGCCCTGGCTGGAGTGCAGCCC.........................................................................231.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTTGGGT...............................................................................................................321.000.00-1.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGCACAAG.................................................241.000.00-----------------1.00--------------------------------------------------------------------------
.............................................................................................................................................................CCCTGGCTGGAGTGCAGCGGCCC......................................................................231.000.00---------------------------------------1.00----------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTTCA.....................................................201.000.00---------------------1.00----------------------------------------------------------------------
.........................................................................................................................................................................TGCAGCGGCACGATCTCGGCTCCCCG.......................................................261.000.001.00-------------------------------------------------------------------------------------------
........................................................................................................TTCTGATTTTTTTTTTTTTTTCTC..........................................................................................................................241.000.001.00-------------------------------------------------------------------------------------------
......................................................................................................................................................TCTGTCGCCCTGGCTGGAGTGCAGCGGCA.......................................................................2920.500.500.50-------------------------------------------------------------------------------------------
.............................................................................................................................................................CCCTGGCTGGAGTGCAGCGGCACG.....................................................................2420.500.500.50-------------------------------------------------------------------------------------------
........................................................................................................................................................TGTCGCCCTGGCTGGAGTGCAGCGGCAC......................................................................2820.500.500.50-------------------------------------------------------------------------------------------
.................................................................................................................................................CTCGCTCTGTCGCCCTGGCTGGAGTGCAGC...........................................................................3050.200.20---------------------------------------0.20----------------------------------------------------

Antisense strand
CGCTTCAGTAGAGGAAGGATCTGCATAGAGTCTTGTAACCTCTATGATGGGTAAGGCTTCTTCTAGGGTTGCCTTCACCTCATGAGCTTTGAAGGACTGATTAGTTCTGATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCTGGCTGGAGTGCAGCGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTTGGCCTCCCAAGTAGCT
.......................................................................................................((..((............................(((((((.....))))))).....(((((((((((....))))..)).)))))))..))......................................................
......................................................................................................103..............................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR189783SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR029127(GSM416756)
A549. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105752CONTROL(GSM1105752)
small RNA sequencing data. (hela)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
.....................................................................................................................................................................................................AGCTCCGCCTCCTGGGTTCACGATC............................ 254.000.00-------------------4.00------------------------------------------------------------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTTGT................................ 283.000.00----------3.00---------------------------------------------------------------------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTTT................................. 273.000.00----------------------------2.00-----------------------------------1.00---------------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTT.................................. 263.000.00--------------------3.00-----------------------------------------------------------------------
................................................................................................................................................................................................CTGCAAGCTCCGCCTCCTGGGTTAAT................................ 262.000.00-----------2.00--------------------------------------------------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTTGGCG............................... 252.000.001.001.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TCCTGCCTTGGCCTCCCAAGTTG.. 232.000.00-2.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTGCAG............................... 212.000.002.00-------------------------------------------------------------------------------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTTTT................................ 282.000.00-----2.00--------------------------------------------------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTCACGAAA............................ 242.000.00-----2.00--------------------------------------------------------------------------------------
......................................................................................................................................TGAGACGGAGTCTCGCTCTGTTCT............................................................................................ 242.000.00------------------2.00-------------------------------------------------------------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTCTT................................ 282.000.00--------------------------------1.00-1.00---------------------------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTGACG................................ 242.000.002.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GCCATTCTCCTGCCTTGGCCTCCCATTT.... 282.000.00-2.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................CGATCTCGGCTCACTGCAAGAAAA............................................... 241.000.00-----------------------------1.00--------------------------------------------------------------
..................................................................................................................................................................................................................................CCTGCCTTGGCCTCCCAAGTTCG. 231.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................................................GGCTCACTGCAAGCTCCGCCTCTTT....................................... 251.000.00------------------------------------------1.00-------------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTCACGCCATTCGG....................... 291.000.00-1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................CGGCACGATCTCGGCTATGC........................................................ 201.000.00-------------------------------------------------------------------------------------------1.00
............................................................................................................................................................GCCCTGGCTGGAGTGCAGCG.......................................................................... 201.000.00------------------------------------1.00-------------------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTCACGCCATGGGC....................... 291.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................CTCCTGCCTTGGCCTCCCAAGTTT.. 241.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................CTCCTGCCTTGGCCTCCCACACC... 231.000.00-1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGCACC................................. 191.000.00-------------------------------------------------------------------------------1.00------------
................................................................................................................................................................................................................................CTTGGGAGGCCAAGGCAGGAG..... 2101.001.00----------------------------------------------------------------------1.00---------------------
.................................................................................................................................................................GGCTGGAGTGCAGCGGCACGATCTGG............................................................... 261.000.001.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GCCATTCTCCTGCCTTGGCCTCCCATC..... 271.000.001.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................GGCTGGAGTGCAGCGGCACGATGGGT............................................................... 261.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................................................CGGAGTCTCGCTCTGTGGCC........................................................................................... 201.000.00-1.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................TGCCTTGGCCTCCCAAGTCGTA 221.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................................................................CGCCCTGGCTGGAGTGCAGTAT......................................................................... 221.000.00----------------1.00---------------------------------------------------------------------------
......................................................................................................................................TGAGACGGAGTCTCGCTCTGTTTAT........................................................................................... 251.000.00------------------1.00-------------------------------------------------------------------------
..........................................................................................................................................................CTGCACTCCAGCCAGGGCGA............................................................................ 2001.001.00------------1.00-------------------------------------------------------------------------------
.........................................................................................................................................GACGGAGTCTCGCTCTGTCGCCAG......................................................................................... 241.000.00-1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................CCTGGCTGGAGTGCAGCGGCACGACG.................................................................. 261.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................CCATTCTCCTGCCTTGGCCTTGA........ 231.000.00-1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TCACGCCATTCTCCTGCCTTGTC............. 231.000.00------------------------------1.00-------------------------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTCACGCCACCGC........................ 281.000.001.00-------------------------------------------------------------------------------------------
........................................................................................................................................................................................................TCCGCCTCCTGGGTTCACGCCATTCTCCACTT.................. 321.000.00-----------------1.00--------------------------------------------------------------------------
...................................................................................................................................................................................................CAAGCTCCGCCTCCTGGGTTCT................................. 221.000.00-------1.00------------------------------------------------------------------------------------
...........................................................................................................................................CGGAGTCTCGCTCTGTCGCCCTGGCC..................................................................................... 261.000.00-1.00------------------------------------------------------------------------------------------
............................................................................................................................................................GCCCTGGCTGGAGTGCATCG.......................................................................... 201.000.00--------------------------------------------------------------1.00-----------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTTG.................................. 221.000.00-------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................................CTCCTGCCTTGGCCTCCCACCCC... 231.000.001.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTCACGCCATTCTCC...................... 301.000.00-1.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................................TCCGCCTCCTGGGTTCACGCCATA.......................... 241.000.00--------1.00-----------------------------------------------------------------------------------
...........................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTTTTG.................................................................................................................. 291.000.00---------------------------------1.00----------------------------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTCACG................................ 241.000.001.00-------------------------------------------------------------------------------------------
........................................................................................................................................................................................................TCCGCCTCCTGGGTTCACGCCATTCCC....................... 271.000.00-1.00------------------------------------------------------------------------------------------
................................................................................................................................................................................................CTGCAAGCTCCGCCTCCTGGGTTCAATA.............................. 281.000.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................................................CGGAGTCTCGCTCTGTCGCGCCC........................................................................................ 231.000.00-1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTCACCC.............................. 221.000.00-----------------------------------------------------1.00--------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTGTC................................ 201.000.00-1.00------------------------------------------------------------------------------------------
................................................................................................................................................TCTCGCTCTGTCGCCCTGGCTGGAGTTCCC............................................................................ 301.000.001.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................CTGCAAGCTCCGCCTCCTGGGTTAAG................................ 261.000.00------------------------------------------------------------------------1.00-------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTTTAT............................... 291.000.00---1.00----------------------------------------------------------------------------------------
...................................................................................................................................................................................................CAAGCTCCGCCTCCTGGGTTGAA................................ 231.000.00---------------------1.00----------------------------------------------------------------------
.................................................................................................................................................................................................TGCAAGCTCCGCCTCCTCCTG.................................... 211.000.00-1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTTCATGCG............................. 271.000.00-1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTTCACGCCACACG........................ 321.000.001.00-------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TGGGAGGCCAAGGCAGGAGAA....... 2101.001.00-------------------------------------------------------------------------1.00------------------
.......................................................................................................................................................................................................................CACGCCATTCTCCTGTAG................. 181.000.00----------------------------------------------------------------------------1.00---------------
.......................................................................................................................................................................................................CTCCGCCTCCTGGGTTCACGCCATTG......................... 261.000.00-------1.00------------------------------------------------------------------------------------
........................................................................................................................................................................................................TCCGCCTCCTGGGTTCACGCCATTCAA....................... 271.000.00-----------------------------1.00--------------------------------------------------------------
...........................................................................................................................................................................................................GCCTCCTGGGTTCACCGCG............................ 191.000.00---------------------------------------------1.00----------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACTGA...................................................... 191.000.00--------------1.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTTCT................................ 281.000.00----------------1.00---------------------------------------------------------------------------
.................................................................................................................................................CTCGCTCTGTCGCCCTGGCTGGAGTGCAGCCC......................................................................... 321.000.00-1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGCGAA................................. 231.000.00--------------------------------------------------------------------------------1.00-----------
.....................................................................................................................................................................................................AGCTCCGCCTCCTGGGTAAAG................................ 211.000.00----------------------------------------------------------------------------------------1.00---
.........................................................................................................................................................................TGCAGCGGCACGATCTCGGTCT........................................................... 221.000.00----1.00---------------------------------------------------------------------------------------
.................................................................................................................................................................GGCTGGAGTGCAGCGGCACGATGGGC............................................................... 261.000.001.00-------------------------------------------------------------------------------------------
...........................................................................................................................................CGGAGTCTCGCTCTGTCGCGTA......................................................................................... 221.000.00--------------------------------------------1.00-----------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTCACGCCATTCCAC...................... 301.000.001.00-------------------------------------------------------------------------------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTCATTTT............................. 311.000.00-------------------------------------1.00------------------------------------------------------
....................................................................................................................................................................................................AAGCTCCGCCTCCTGGGTTACGT............................... 231.000.00-1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTTTC................................ 281.000.00----------------1.00---------------------------------------------------------------------------
.................................................................................................................................................................................CACGATCTCGGCTCACATAA..................................................... 201.000.00-------------------------------------------------------------------------------------1.00------
.....................................................................................................................................................................................................AGCTCCGCCTCCTGGGTAT.................................. 191.000.00-----------------------------------------1.00--------------------------------------------------
.....................................................................................................................................................................................................AGCTCCGCCTCCTGGGTTCACGCCATTCTCA...................... 311.000.00-1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GCTCCGCCTCCTGGGTTCACGT.............................. 221.000.00-1.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................AGCTCCGCCTCCTGGGTTCACAA.............................. 231.000.00--------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTTGGC................................ 241.000.00------------------------1.00-------------------------------------------------------------------
...................................................................................................................................................................................................CAAGCTCCGCCTCCTGGGTTTT................................. 221.000.00-----1.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................CACTGCAAGCTCCGCCTCCTGGGTTTAGA............................... 291.000.00----------------------------------1.00---------------------------------------------------------
........................................................................................................................................................................................................TCCGCCTCCTGGGTTCACGCCATTAAA....................... 271.000.00-------------------------------------------------------1.00------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTGGCG................................ 241.000.00-1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GCAAGCTCCGCCTCCTGGGTTCATGGA............................. 271.000.001.00-------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CGGCTCACTGCAAGCTCCGCCTCCTGGGTTGGG................................ 331.000.001.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................ACTTGGGAGGCCAAGGCAGGAGAATGGCGTG.... 3180.120.12-0.12------------------------------------------------------------------------------------------