ID: uc002vbu.2_intron_7_0_chr2_207651624_f.5p
GENE: (8)
chr2:207651574-207651823+


(1)
AGO1.ip
(2)
B-CELL
(3)
BRAIN
(10)
CELL-LINE
(1)
CERVIX
(3)
HEART
(1)
LIVER
(2)
OTHER
(4)
SKIN
(1)
XRN.ip

Sense strand
TTTTAATCAGCTTCTGCAAAAAGACATCATCAGTGAGCTGCTGACATCAGGTAGGATGTTAGTGCAGAATTGGTCACCAATTGTGACCAATTCTGCACTACCACTAGCTACCATATGACTCTGAATGGGGTCTTAGTTGGAGCAGTGTTAGTTGAAATTTGCAGAGCAGGTGTTGCTGTGGAAAGGGCTGATAATGGTGAAGTCAAAGGATAGTGCTTCAAAGCAGCAAACCTACAGACCCTTCTTTAAT
...........................................................((((((((((((((((((.....)))))))))))))))))).((((((((.(((...((((((....)))))).....))))))..((((((((....(((.((.(((((...))))).)).))).)))))))).)))))...................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189784SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
..................................................GTAGGATGTTAGTGCAGAATTGGT................................................................................................................................................................................24120.0020.008.004.00-2.00------1.00----1.001.001.00--1.00--1.00--
..................................................GTAGGATGTTAGTGCAGAATTGG.................................................................................................................................................................................23119.0019.0014.003.00---2.00--------------------
.............................................................................................................................................................................TGCTGTGGAAAGGGCTCAGA.........................................................205.000.00--5.00-----------------------
...............................................................................................................CATATGACTCTGAATTCTG........................................................................................................................191.000.00----1.00---------------------
...................................................................................................................................................TTAGTTGAAATTTGCAGAGCAGGTGTTA...........................................................................281.000.00------------1.00-------------
...........................CATCAGTGAGCTGCTGACATCAG........................................................................................................................................................................................................2311.001.00------------------1.00-------
................................GTGAGCTGCTGACATCAGATGA....................................................................................................................................................................................................221.000.00-----------1.00--------------
........................................................................................................................................................................GGTGTTGCTGTGGAAAGGGCT.............................................................2111.001.00-------1.00------------------
..................................................GTAGGATGTTAGTGCAGAATTGGG................................................................................................................................................................................2411.0019.00----------------------1.00---
..................................................GTAGGATGTTAGTGCAGAATCGGG................................................................................................................................................................................241.000.001.00-------------------------
..........................................................TTAGTGCAGAATTGGTCACCAATT........................................................................................................................................................................2411.001.00--------------1.00-----------
..................................................GTAGGATGTTAGTGCAGAATTTG.................................................................................................................................................................................231.000.001.00-------------------------
.....................................................................................................................................................................GCAGGTGTTGCTGTGGAAAGGGC..............................................................2311.001.00-------------------1.00------
............................................................AGTGCAGAATTGGTCACC............................................................................................................................................................................1811.001.00---------1.00----------------
...............................AGTGAGCTGCTGACATC..........................................................................................................................................................................................................1711.001.00------1.00-------------------
......TCAGCTTCTGCAAAAAGACATCATC...........................................................................................................................................................................................................................2511.001.00-------------1.00------------
............................................................................................................................................................................TTGCTGTGGAAAGGGCTGATAATGGTG...................................................2711.001.00---------------------1.00----
..................................................GTAGGATGTTAGTGCAGAATTG..................................................................................................................................................................................2211.001.00-1.00------------------------
..........................................................TTAGTGCAGAATTGGTCACCAATTGTGACCAAT...............................................................................................................................................................3311.001.00--------1.00-----------------
.........................................................................................ATTCTGCACTACCACT.................................................................................................................................................1630.330.33------------------------0.33-

Antisense strand
TTTTAATCAGCTTCTGCAAAAAGACATCATCAGTGAGCTGCTGACATCAGGTAGGATGTTAGTGCAGAATTGGTCACCAATTGTGACCAATTCTGCACTACCACTAGCTACCATATGACTCTGAATGGGGTCTTAGTTGGAGCAGTGTTAGTTGAAATTTGCAGAGCAGGTGTTGCTGTGGAAAGGGCTGATAATGGTGAAGTCAAAGGATAGTGCTTCAAAGCAGCAAACCTACAGACCCTTCTTTAAT
...........................................................((((((((((((((((((.....)))))))))))))))))).((((((((.(((...((((((....)))))).....))))))..((((((((....(((.((.(((((...))))).)).))).)))))))).)))))...................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189784SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
...............ACTGATGATGTCTTTTTGC........................................................................................................................................................................................................................ 1911.001.00----1.00---------------------