ID: uc002uzt.3_intron_37_0_chr2_204034575_f.3p
GENE: NBEAL1(38)
chr2:204036451-204036700+


(1)
AGO1.ip 		(1)
AGO2.ip 		(4)
B-CELL 		(1)
BRAIN 		(16)
BREAST 		(21)
CELL-LINE 		(10)
CERVIX 		(2)
FIBROBLAST 		(2)
HEART 		(4)
HELA 		(2)
LIVER 		(1)
OTHER 		(23)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GATTTATGTTGAATTTTCTGTTCCTTTTTTAGAGACCAATATTTTAAAAGAAGTAAATTTAGGAAAAGTATATTGATTTATCTCCCTGTTGTACCTTTTTTTTTTTTTTAGCCCATTCTTGGTACTGTCAGTAATAGCTACCAATGTCTAAGAGATGTAGATTTTTAAATTTTGATATTGCTCTTTTTTGTGCTGTCTAGAAATGGGTAAACAGAGAGATATCAAATTTTGACTACCTCATTCAAATAAA
.......................................................................................................((((((((..(((...(((((((((.....)))).)))))))).))))))))...............................................................................................
.................................................................................82..........................................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189784SRR189786SRR189782SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189783SRR040028(GSM532913)
G026N. (cervix)		SRR343334SRR343335SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR343337SRR040015(GSM532900)
G623T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040043(GSM532928)
G428T. (cervix)		GSM532885(GSM532885)
G850N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR343336SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................................................TGTTGTACCTTTTTTTTGTTC...............................................................................................................................................21174.000.0095.001.0061.0013.00----1.00-------------1.00---1.00-1.00--------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTTC..............................................................................................................................................228159.751.5099.750.6250.255.00---0.120.38-----------------------0.12-0.250.38--0.38-0.12----0.120.120.12---0.12---------0.120.12--0.120.12---0.12----0.12--0.12--0.120.120.12-0.12----0.12--0.120.120.12-
......................................................................................TGTTGTACCTTTTTTTTTG.................................................................................................................................................198107.501.50-86.75-8.1211.00--0.12-0.620.62-0.12----------------------------------------------------------------0.12-------------------
......................................................................................TGTTGTACCTTTTTTTTTTG................................................................................................................................................20861.502.88-54.38-0.255.62----0.750.25-0.12----------------------------------------------------------0.12-------------------------
......................................................................................TGTTGTACCTTTTTTTG...................................................................................................................................................1749.000.00-19.00-26.002.00--2.00-----------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGTTC.............................................................................................................................................23835.752.8819.38-15.000.50---------------------------0.12---0.250.12---0.12-----------------------0.12--------------------------0.12-----
......................................................................................TGTTGTACCTTTTTTTGTTC................................................................................................................................................2035.000.0013.00-13.008.00-----------1.00---------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTCTTG.................................................................................................................................................1926.000.00-23.00-1.002.00--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTT...............................................................................................................................................21811.251.503.380.122.620.120.12---0.12--0.25-0.120.12----------------0.62-0.25---0.38---0.250.120.250.250.12-0.12-0.12-0.12--------0.12--0.12---0.120.12----0.120.12-0.12--0.120.12-----0.120.12-0.12--0.12----
......................................................................................TGTTGTACCTTTTTTTCTG.................................................................................................................................................1910.000.00-8.00-1.001.00--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTGTT................................................................................................................................................209.000.003.00-2.00----------1.001.00---------1.00--1.00---------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTCTTG................................................................................................................................................208.000.00-8.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTCG.................................................................................................................................................197.000.00-4.00-1.002.00--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTGTCC...............................................................................................................................................216.000.002.00-4.00----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTGTTT...............................................................................................................................................216.000.002.00-3.001.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTCTG................................................................................................................................................205.000.00-5.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTG..............................................................................................................................................2264.331.67-3.67-0.170.50--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTGT.................................................................................................................................................194.000.00-1.001.002.00---------------------------------------------------------------------------------------------
.....................................................................................CTGTTGTACCTTTTTTTTTTG................................................................................................................................................214.000.00-4.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGTT.................................................................................................................................................194.000.00-1.001.00-----1.00---------------------1.00------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGG..................................................................................................................................................184.000.00-1.00-2.00---1.00-----------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTC..............................................................................................................................................2263.331.671.000.171.17------------------------------0.330.33-------------------0.17-0.17----------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGTT..............................................................................................................................................2283.122.881.750.121.00------------------------------0.12------------------------------------------------------0.12--------
......................................................................................TGTTGTACCTTTTTTCTG..................................................................................................................................................183.000.00-2.00-1.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTGTTA...............................................................................................................................................213.000.002.00--1.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTCT.................................................................................................................................................193.000.00-2.00-1.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTT.................................................................................................................................................1982.882.88-2.00-0.380.50--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGT................................................................................................................................................2082.751.500.500.620.500.38----0.12-0.12--0.12--------------------0.12-------------------------------------------------0.12-----------0.12
......................................................................................TGTTGTACCTTTTTTTTTTT................................................................................................................................................2082.502.50-2.00--0.38-------------------------------0.12------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTGTTC............................................................................................................................................2482.382.501.25-1.00-------------------------------------------0.12--------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTGTTC...........................................................................................................................................2562.331.671.500.170.67----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTTA..............................................................................................................................................2282.121.501.38-0.50---------------------------------------0.12--------------------------0.12---------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTCC..............................................................................................................................................2282.121.501.75-0.38----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTCCTG.................................................................................................................................................192.000.00-2.00-----------------------------------------------------------------------------------------------
........................................................................................TTGTACCTTTTTTTTTTTTTTCAGC.........................................................................................................................................252.000.00------2.00------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTGGTC...............................................................................................................................................212.000.001.00--1.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGTTG................................................................................................................................................202.000.001.001.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTCTCG.................................................................................................................................................192.000.00-2.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGTG.................................................................................................................................................192.000.00-1.00-1.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTAG.................................................................................................................................................192.000.00-2.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTGTTC.................................................................................................................................................192.000.00---1.00---1.00-----------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTGTTG.................................................................................................................................................192.000.00-2.00-----------------------------------------------------------------------------------------------
.....................................................................................CTGTTGTACCTTTTTTTTTGTTC..............................................................................................................................................232.000.002.00------------------------------------------------------------------------------------------------
.....................................................................................CTGTTGTACCTTTTTTTTTG.................................................................................................................................................202.000.00-1.00-1.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGATC................................................................................................................................................202.000.001.00-1.00----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTT...............................................................................................................................................2161.671.67-1.00--0.50---0.17----------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTC.............................................................................................................................................2361.671.670.50-0.830.17---------------------------------------------------0.17-----------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTT..............................................................................................................................................2261.671.670.170.830.50---------------------------------0.17------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTT..................................................................................................................................................1881.501.50-1.00-0.250.12-----0.12--------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGCTC..............................................................................................................................................2281.381.501.12-0.12----------------------------------------------0.12-----------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTTG..............................................................................................................................................2281.251.500.38-0.620.25---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTT.............................................................................................................................................2351.201.20-0.201.00----------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................ATCAAATTTTGACTACCTCAT.........2111.001.00-------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................AAGAGATGTAGATTTTTAAAT................................................................................2111.001.00-----------------1.00-------------------------------------------------------------------------------
.....................................................................................CTGTTGTACCTTTTTTTTTTTG...............................................................................................................................................221.000.00-1.00-----------------------------------------------------------------------------------------------
.............................................................................................CCTTTTTTTTTTTTTTAGGGTT.......................................................................................................................................221.000.00-----1.00-------------------------------------------------------------------------------------------
..............................................................................................CTTTTTTTTTTTTTTAGCCCAA......................................................................................................................................221.000.00-----1.00-------------------------------------------------------------------------------------------
.........................................................................................................................................................................TTTTGATATTGCTCTTGG...............................................................181.000.00------1.00------------------------------------------------------------------------------------------
.............................................................................................CCTTTTTTTTTTTTTTAGCCCCTGC....................................................................................................................................251.000.00-----1.00-------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTCGGG.................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------------------------------------
...............................................................................................TTTTTTTTTTTTTTAGCCCCGAG....................................................................................................................................231.000.00-----1.00-------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTCTTA................................................................................................................................................201.000.00-1.00-----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TTTTTTGTGCTGTCTAGAAA...............................................2011.001.00------------------1.00------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGCTC................................................................................................................................................201.000.001.00------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGC..................................................................................................................................................181.000.00---1.00---------------------------------------------------------------------------------------------
...............................................................................................TTTTTTTTTTTTTTAGCCCAGGCC...................................................................................................................................241.000.00-----1.00-------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGCTG................................................................................................................................................201.000.00---1.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTCAG.................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------------------------------------
...............................................................................................TTTTTTTTTTTTTTAGCCCATTAGC..................................................................................................................................251.000.00-----1.00-------------------------------------------------------------------------------------------
...............................................................................................TTTTTTTTTTTTTTAGCCCACTG....................................................................................................................................231.000.00------1.00------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTATTT.................................................................................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------
...............................................................................................TTTTTTTTTTTTTTAGCCGTTG.....................................................................................................................................221.000.00-----1.00-------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTATTG.................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------------------------------------
.......................................................................................GTTGTACCTTTTTTTTTG.................................................................................................................................................181.000.00---1.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTCGTT...............................................................................................................................................211.000.001.00------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGGGG................................................................................................................................................201.000.00-1.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTATCT.................................................................................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------
.....................................................................................CTGTTGTACCTTTTTTTG...................................................................................................................................................181.000.00----1.00--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTCTCC................................................................................................................................................201.000.00---1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GGGTAAACAGAGAGATATC...........................1911.001.00-----------1.00-------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTCTTG...............................................................................................................................................211.000.00-1.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTGT..................................................................................................................................................181.000.00-1.00-----------------------------------------------------------------------------------------------
..............................................................................................CTTTTTTTTTTTTTTAGCCCGAG.....................................................................................................................................231.000.00-----1.00-------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTCGTG................................................................................................................................................201.000.00-1.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTGACA.................................................................................................................................................191.000.001.00------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTGA.................................................................................................................................................191.000.00------------1.00------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTGCTC.................................................................................................................................................191.000.001.00------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTA.................................................................................................................................................1981.001.50-0.62-0.250.12--------------------------------------------------------------------------------------------
...........AATTTTCTGTTCCTTTGCC............................................................................................................................................................................................................................191.000.00------1.00------------------------------------------------------------------------------------------
............ATTTTCTGTTCCTTTTTCA...........................................................................................................................................................................................................................191.000.00-----------------------------1.00-------------------------------------------------------------------
.....................................................................................CTGTTGTACCTTTTTTTTGTTC...............................................................................................................................................221.000.001.00------------------------------------------------------------------------------------------------
............................................................................................ACCTTTTTTTTTTTTTTAGGGG........................................................................................................................................221.000.00------1.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGAGAGATATCAAATTTTGACTA...............2311.001.00-----------------------1.00-------------------------------------------------------------------------
.........................................................................................TGTACCTTTTTTTTTTCTGT.............................................................................................................................................201.000.00------1.00------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTGTC................................................................................................................................................201.000.00-1.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTATTG...............................................................................................................................................211.000.00-1.00-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTAG..................................................................................................................................................181.000.00---1.00---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTCG..................................................................................................................................................181.000.00---1.00---------------------------------------------------------------------------------------------
...............................................................................................TTTTTTTTTTTTTTAGCCGCG......................................................................................................................................211.000.00-----1.00-------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTA..................................................................................................................................................181.000.00---1.00---------------------------------------------------------------------------------------------
.............................................................................................CCTTTTTTTTTTTTTTAGGAGG.......................................................................................................................................221.000.00------1.00------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGTTA.............................................................................................................................................2380.882.880.38-0.38---------------------------------------------------------------------0.12------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTTG............................................................................................................................................2450.801.20-0.60--0.20--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGTTT.............................................................................................................................................2380.752.88--0.75----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTGC..............................................................................................................................................2280.751.500.50-0.120.12---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTGTTC..........................................................................................................................................2660.671.670.33-0.33----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGATC..............................................................................................................................................2280.621.500.50-0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTCTTC..............................................................................................................................................2280.501.500.38-0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTA................................................................................................................................................2080.502.88-0.38-0.12---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTA...............................................................................................................................................2180.502.50-0.50-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTTC............................................................................................................................................2450.401.20-0.200.20----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTCTTC.............................................................................................................................................2380.382.880.12-0.25----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTCTG...............................................................................................................................................2180.381.500.120.12--0.12--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGG................................................................................................................................................2080.381.50-0.38-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTCG................................................................................................................................................2080.381.50-0.25-0.12---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGT...............................................................................................................................................2180.382.880.25-0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGGTC..............................................................................................................................................2280.381.500.25-0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTGTCC...........................................................................................................................................2560.331.670.33------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGTCC.............................................................................................................................................2380.252.880.25------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTAC..............................................................................................................................................2280.251.500.25------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTCC..............................................................................................................................................2280.252.500.12--0.12---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGATC.............................................................................................................................................2380.252.880.25------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTATTC.............................................................................................................................................2380.252.880.12-0.12----------------------------------------------------------------------------------------------
..............TTTCTGTTCCTTTTTTAG..........................................................................................................................................................................................................................1840.250.25--------------------------------------------------0.25----------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTTT..............................................................................................................................................2280.251.500.12-0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGCTC.............................................................................................................................................2380.252.88--0.25----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGA...............................................................................................................................................2180.252.88----------0.25--------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTTGTT..........................................................................................................................................2650.201.20--0.20----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTTGTTT.........................................................................................................................................2750.201.20--0.20----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTTTG...........................................................................................................................................2550.201.20--0.20----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTCT............................................................................................................................................2460.171.67--0.17----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTA.............................................................................................................................................2360.171.670.17------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTCA.............................................................................................................................................2360.171.67---------------------------------------------------------0.17---------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTGA.............................................................................................................................................2360.171.67--0.17----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTCG.............................................................................................................................................2360.171.67-0.17-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTTGGT...........................................................................................................................................2560.171.67--0.17----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTGTT............................................................................................................................................2460.171.67-0.17-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTTCGTC...........................................................................................................................................2560.171.67--0.17----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTA...............................................................................................................................................2180.121.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTGT..............................................................................................................................................2280.121.50---0.12---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTC................................................................................................................................................2080.122.88-0.12-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTCTGA............................................................................................................................................2480.122.50----0.12--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGGTA..............................................................................................................................................2280.121.50--0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTGTCC............................................................................................................................................2480.122.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTATCT..............................................................................................................................................2280.121.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGCTG.............................................................................................................................................2380.122.88--0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTGTC.............................................................................................................................................2380.122.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTATGC..............................................................................................................................................2280.121.50-0.12-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTGTGC.............................................................................................................................................2380.122.880.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTAG...............................................................................................................................................2180.122.880.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTCC...............................................................................................................................................2180.122.88---0.12---------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTCTTA.............................................................................................................................................2380.122.88--0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTAGTC..............................................................................................................................................2280.121.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTGC..............................................................................................................................................2280.122.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTGTTT............................................................................................................................................2480.122.50--0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTCT...............................................................................................................................................2180.122.880.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGTCA..............................................................................................................................................2280.121.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGGT...............................................................................................................................................2180.121.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGGCC..............................................................................................................................................2280.121.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGC................................................................................................................................................2080.121.50-0.12-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTCG...............................................................................................................................................2180.122.88----0.12--------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTCTTT..............................................................................................................................................2280.121.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTTATT.............................................................................................................................................2380.122.500.12------------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTGGTT..............................................................................................................................................2280.121.50--0.12----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTAG................................................................................................................................................2080.121.50-0.12-----------------------------------------------------------------------------------------------
......................................................................................TGTTGTACCTTTTTTTTTTATC..............................................................................................................................................2280.122.88---0.12---------------------------------------------------------------------------------------------

Antisense strand
GATTTATGTTGAATTTTCTGTTCCTTTTTTAGAGACCAATATTTTAAAAGAAGTAAATTTAGGAAAAGTATATTGATTTATCTCCCTGTTGTACCTTTTTTTTTTTTTTAGCCCATTCTTGGTACTGTCAGTAATAGCTACCAATGTCTAAGAGATGTAGATTTTTAAATTTTGATATTGCTCTTTTTTGTGCTGTCTAGAAATGGGTAAACAGAGAGATATCAAATTTTGACTACCTCATTCAAATAAA
.......................................................................................................((((((((..(((...(((((((((.....)))).)))))))).))))))))...............................................................................................
.................................................................................82..........................................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189784SRR189786SRR189782SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189783SRR040028(GSM532913)
G026N. (cervix)		SRR343334SRR343335SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR343337SRR040015(GSM532900)
G623T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040043(GSM532928)
G428T. (cervix)		GSM532885(GSM532885)
G850N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR343336SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................TTTAGGAAAAGTATATAAAA............................................................................................................................................................................. 201.000.00-1.00-----------------------------------------------------------------------------------------------
.........TGAATTTTCTGTTCCCACA.............................................................................................................................................................................................................................. 191.000.00---------------------1.00---------------------------------------------------------------------------
................................................................................................GGCTAAAAAAAAAAAAA......................................................................................................................................... 1701.001.00-------------------1.00-----------------------------------------------------------------------------
.................................................................................................GGGCTAAAAAAAAAAAA........................................................................................................................................ 1701.001.00----------------1.00--------------------------------------------------------------------------------
.....................................................................................................ATGGGCTAAAAAAAA...................................................................................................................................... 1501.001.00--------------------1.00----------------------------------------------------------------------------
...............................................................................................AATGGGCTAAAAAAAAAAAAAA..................................................................................................................................... 2230.670.67--------------------------------0.33------0.33---------------------------------------------------------
................................................................................................AATGGGCTAAAAAAAAAAAAA..................................................................................................................................... 2140.500.50--------------------------------0.25---------------0.25------------------------------------------------
.................................................................................................AATGGGCTAAAAAAAAAAAA..................................................................................................................................... 2050.400.40----------------------------------------------------0.200.20-------------------------------------------
...................................................................................................AATGGGCTAAAAAAAAAA..................................................................................................................................... 1870.290.29----------------------------------------------------------0.140.14-------------------------------------