ID: uc002uzo.2_intron_14_0_chr2_203847165_f.5p
GENE: ALS2CR8(15)
chr2:203847115-203847364+


(5)
BRAIN
(5)
BREAST
(4)
CELL-LINE
(3)
CERVIX
(1)
HEART
(6)
OTHER
(4)
SKIN

Sense strand
AGATGTGCAGACTATTCCAATACAGATTATAGACAACCACTCAGCTCTTAGTAAGTTGAAATCAATTTATGATGTTATTGTTGTAACCTTTGTGGATTATCATCACTATATTATACTATAGATAAAACTATTATTTCTACCCAGTGGGTCTATGATATTATGTAAATGAAGCAAAATTATGAGAGAGAAGGAGGAGATTTCATTACCCTGCGTTTCAGAACTTTTAACCTTAAATTTTCTTCTTCTTATT
.................................................................((((((((....(((((....((.....))....((((...(((((.(((.(((((((...(((.............)))..))))))).))).))))).))))))))).))))))))...................................................................
...........................................................60...........................................................................................................................185...............................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR343336GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343337SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................................................GTAAATGAAGCAAAATACAT.....................................................................2043.000.0037.005.00----------------1.00---------
..................................................................................................................................................................TAAATGAAGCAAAATTAATTC...................................................................215.000.00--5.00-------------------------
.................................................................................................................................................................GTAAATGAAGCAAAATACA......................................................................194.000.004.00---------------------------
.................................................................................................................................................................GTAAATGAAGCAAAACATG......................................................................194.000.00-4.00--------------------------
...................................................................................................................................................................................TGAGAGAGAAGGAGGAGAGGTT.................................................223.000.00-------------------1.001.00---1.00---
...................................................................................................................................................................................TGAGAGAGAAGGAGGAGAGGCT.................................................223.000.00----1.00-----1.00-1.00---------------
.................................................................................................................................................................GTAAATGAAGCAAAATACGA.....................................................................202.000.00-2.00--------------------------
.................................................................................................................................................................GTAAATGAAGCAAAATACAA.....................................................................201.000.001.00---------------------------
....................TACAGATTATAGACAACCACTC................................................................................................................................................................................................................2211.001.00----------------------1.00-----
.....................ACAGATTATAGACAACCACTCAGCT............................................................................................................................................................................................................2511.001.00-----------------------1.00----
...................................................................................................................................................................................................................................CCTTAAATTTTCTTCG.......161.000.00-------1.00--------------------
.....................ACAGATTATAGACAACCACTC................................................................................................................................................................................................................2111.001.00--------1.00-------------------
...................................................................................................................................................................................TGAGAGAGAAGGAGGAGAGCTC.................................................221.000.00----------------1.00-----------
..................................................................................................................................................GGTCTATGATATTATTTTT.....................................................................................191.000.00---------------1.00------------
.........................................................................................................................................................................................AGAAGGAGGAGATTTCATAGTT...........................................221.000.00------1.00---------------------
......................CAGATTATAGACAACCACTCAGCTCTTA........................................................................................................................................................................................................2811.001.00-------------------------1.00--
.................................................................................................................................................................GTAAATGAAGCAAAATACG......................................................................191.000.001.00---------------------------
.................................................................................................................................................................GTAAATGAAGCAAAAATCG......................................................................191.000.00-1.00--------------------------
.........................................................................................................................................................................................AGAAGGAGGAGATTTCATATTT...........................................221.000.00-----1.00----------------------
.................................................................................................................................................................GTAAATGAAGCAAAACTTG......................................................................191.000.00-1.00--------------------------
...................................................................................................................................................................................TGAGAGAGAAGGAGGAGAGGTA.................................................221.000.00----1.00-----------------------
...................................................................................................................................................................AAATGAAGCAAAATTTAT.....................................................................181.000.00--------------1.00-------------
.........................................................................................................................................................................................AGAAGGAGGAGATTTCATAG.............................................201.000.00------1.00---------------------
................................................................ATTTATGATGTTATTGTTG.......................................................................................................................................................................1970.140.14---------------------------0.14

Antisense strand
AGATGTGCAGACTATTCCAATACAGATTATAGACAACCACTCAGCTCTTAGTAAGTTGAAATCAATTTATGATGTTATTGTTGTAACCTTTGTGGATTATCATCACTATATTATACTATAGATAAAACTATTATTTCTACCCAGTGGGTCTATGATATTATGTAAATGAAGCAAAATTATGAGAGAGAAGGAGGAGATTTCATTACCCTGCGTTTCAGAACTTTTAACCTTAAATTTTCTTCTTCTTATT
.................................................................((((((((....(((((....((.....))....((((...(((((.(((.(((((((...(((.............)))..))))))).))).))))).))))))))).))))))))...................................................................
...........................................................60...........................................................................................................................185...............................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR343336GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343337SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................ATGATGTTATTGTTGTAG.................................................................................................................................................................... 184.000.00---3.00----------------------1.00-
................................ACAACCACTCAGCTCTTG........................................................................................................................................................................................................ 181.000.00-------------1.00--------------
................................ACAACCACTCAGCTCTGTGG...................................................................................................................................................................................................... 201.000.00-----------1.00----------------
.............................................................................................................................................................TTATGTAAATGAAGCAAT........................................................................... 181.000.00-----1.00----------------------
................................ACAACCACTCAGCTCGGGG....................................................................................................................................................................................................... 191.000.00---------------------1.00------
............................................................................................................................................................................................................ACCCTGCGTTTCAGAAGTA........................... 191.000.00---------1.00------------------
................................ACAACCACTCAGCTCTGT........................................................................................................................................................................................................ 181.000.00-----------------1.00----------
.................................................................................................................................................................................................................GCGTTTCAGAACTTTCCAG...................... 191.000.00-1.00--------------------------