ID: uc002uyl.3_intron_13_0_chr2_202538280_r.3p
GENE: (11)
chr2:202538230-202538479-


(11)
CELL-LINE
(7)
HEART
(3)
OTHER
(6)
SKIN

Sense strand
ATTTTCTTATTGAAAAGATGTGAGGACAACTATAAAGGCAGTTTTTGACAAAAGAAAACATGCCTTCTCAATGACAATATTTTCATATTAACTTCCAGTGGTGAACACATATTTTAGATGGTTATAGTAATAGCTGCAATACCACTTTTTATTTTTTTAAACTTAACATCTTTTTTTTTCTTTTTTAATTATACTGTAAGTTCTGGGATACATGTGCAGAACGTGCAGGTTTGTTACATAGGTATACATG
...................................................................................................................((.((((..((((....))))....))))))........................................................................................................
.........................................................................................................106.........................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR343337DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343336SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................................................................................CACTTTTTATTTTTTTTTAG........................................................................................2011.000.00---4.004.003.00---------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTTAGC............................................................255.000.00-3.002.00------------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTAAG.............................................................2354.600.201.80--2.000.200.400.20--------------------
.............................................................................................................................................................................................................GGATACATGTGCAGAACTCTG........................214.000.00----------2.00----2.00-----------
....................................................................................................................................................................AACATCTTTTTTTTTCTTTTTTTTG.............................................................254.000.002.00---1.001.00---------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTAATCTG..........................................................273.000.002.00--1.00-----------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTAGCAG...........................................................2623.000.50-1.002.00------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTG................................................................213.000.001.00-2.00------------------------
....................................................................................................................................................................AACATCTTTTTTTTTCTTTTTTTG..............................................................243.000.002.00---1.00----------------------
..............................................................................................................ATTTTAGATGGTTATCCGC.........................................................................................................................193.000.00----------------2.00--1.00-------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTTTAG............................................................253.000.001.001.001.00------------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTAATAAAG.........................................................272.000.00----2.00----------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTTAG.............................................................242.000.001.001.00-------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTCTTG.............................................................242.000.002.00--------------------------
....................................................................................................................................................................AACATCTTTTTTTTTCTTTTTTTTTG............................................................262.000.001.00--1.00-----------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTCC..............................................................232.000.00--2.00------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTAGC..............................................................232.000.00-1.001.00------------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTCAAG............................................................242.000.001.00--1.00-----------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTTATG............................................................242.000.002.00--------------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTCTG..............................................................222.000.002.00--------------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTGCG................................................................191.000.00-1.00-------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCCTAG..................................................................191.000.00-1.00-------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTAG.................................................................201.000.00---1.00-----------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTTTTCTGC............................................................231.000.00--1.00------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTAACG...............................................................221.000.00---1.00-----------------------
....................................................................................................................................................................AACATCTTTTTTTTTCAAT...................................................................191.000.00--------1.00------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTTTTAATCTC..........................................................251.000.00--1.00------------------------
........................................................................................................................................................................TCTTTTTTTTTCTTTTTTAATTCTG.........................................................251.000.00-----1.00---------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTTTCGAC.............................................................221.000.00-1.00-------------------------
...................................................................................................................................................................TAACATCTTTTTTTTTCTTATTG................................................................231.000.001.00--------------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTTTATAG.............................................................221.000.00--------1.00------------------
...........................................................................................................................................................................TTTTTTTTCTTTTTTAATTAAACG.......................................................241.000.001.00--------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTTCTG............................................................251.000.001.00--------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTGAG..................................................................191.000.00-1.00-------------------------
............................................................................................................................................................................TTTTTTTCTTTTTTAATTAACAG.......................................................231.000.001.00--------------------------
.............................................................................................................................................................................................................GGATACATGTGCAGAACGTGC........................2101.001.00--------------1.00------------
........................................................................................................................................................................TCTTTTTTTTTCTTTTTTAATTC...........................................................231.000.00-1.00-------------------------
....................................................................................................................................................................AACATCTTTTTTTTTAACG...................................................................191.000.00-----1.00---------------------
........................................................................................................................................................................TCTTTTTTTTTCTTTTTTAAGAAG..........................................................241.000.00------1.00--------------------
.........................................................................................................................................................................................................TCTGGGATACATGTGCAGAACGTGC........................2501.001.00-----------------1.00---------
.....................................................................................................................................................................ACATCTTTTTTTTTCTAGAA.................................................................201.000.00--1.00------------------------
................................................................................................................................................................ACTTAACATCTTTTTTTCTTT.....................................................................211.000.00------1.00--------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTTCAG............................................................241.000.00----1.00----------------------
....................................................................................................................................................................................................................TGTGCAGAACGTGCAGGTTTGTTACAGGT.........291.000.00-1.00-------------------------
....................................................................................................................................................................AACATCTTTTTTTTTCTTTCTTG...............................................................231.000.001.00--------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTTATG............................................................251.000.001.00--------------------------
....................................................................................................................................................................AACATCTTTTTTTTTCTTCAAG................................................................221.000.00------1.00--------------------
....................................................................................................................................................................AACATCTTTTTTTTTCTTTTTCCG..............................................................241.000.00---1.00-----------------------
...........................................................................................................................................................................................................TGGGATACATGTGCAGAACGTGCAGGTTTGCA...............321.000.00--1.00------------------------
....................................................................................................................................................TTATTTTTTTAAACTTCTAG..................................................................................201.000.00---1.00-----------------------
......................................................................................................................................................................................................AGTTCTGGGATACATGTGCAGAACTCTG........................281.000.00-------1.00-------------------
...............................................................................................................................................................................................................ATACATGTGCAGAACGTGCAGGACTG.................261.000.00------1.00--------------------
.........................................................................................................................................................................................................TCTGGGATACATGTGCAGAGT............................211.000.00--------------1.00------------
....................................................................................................................................................................................................................TGTGCAGAACGTGCAGGCTGG.................211.000.00--1.00------------------------
............................................................................................................................................................................TTTTTTTCTTTTTTAATTATAG........................................................221.000.00---1.00-----------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTTCTG............................................................241.000.00---1.00-----------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTATGC.................................................................201.000.00----1.00----------------------
................................................................................................................................................CTTTTTATTTTTTTAAATAAG.....................................................................................211.000.00----1.00----------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTGGTC................................................................191.000.00-1.00-------------------------
..............................................................................................................................................CACTTTTTATTTTTTTTTAT........................................................................................201.000.00-----1.00---------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTTTAG............................................................241.000.001.00--------------------------
...........................................................................................................................................................................................................................AACGTGCAGGTTTGTTACATCGTT.......241.000.00------------------------1.00--
.......................................................................................................................................................................ATCTTTTTTTTTCTTTTTTAATTGAG.........................................................261.000.00-1.00-------------------------
...........................................................................................................................................................................TTTTTTTTCTTTTTTAATTATG.........................................................221.000.00----1.00----------------------
..........................................................................................................................................................TTTTAAACTTAACATATCG.............................................................................191.000.00---1.00-----------------------
.................................................................................................................................................................................................................ACATGTGCAGAACGTGCAGGCGTG.................241.000.00-1.00-------------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTTTTGAGC............................................................231.000.00-1.00-------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTAAG................................................................211.000.001.00--------------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTAATAAA..........................................................261.000.00-----1.00---------------------
...................................................................................................................................................................TAACATCTTTTTTTTTAAG....................................................................191.000.001.00--------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTAGC...............................................................221.000.00-1.00-------------------------
....................................................................................................................................................................AACATCTTTTTTTTTCTTTTTG................................................................221.000.00------1.00--------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTTCG.............................................................231.000.00---1.00-----------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTAGC................................................................211.000.00--1.00------------------------
............................................................................................................................................................................................................................ACGTGCAGGTTTGTTACAGGT.........211.000.00--1.00------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCGAG...................................................................181.000.00-1.00-------------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTCAAG.............................................................231.000.001.00--------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTCG..................................................................191.000.00---1.00-----------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTCG...................................................................181.000.001.00--------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTAACC............................................................251.000.00-1.00-------------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTGAGC.............................................................231.000.00--1.00------------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTTTTAATTTTA.........................................................261.000.00-1.00-------------------------
.......................................................................................................................................................................................................GTTCTGGGATACATGTGCAGAACTCTG........................271.000.00-------------1.00-------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTTTTAATG............................................................231.000.00---1.00-----------------------
...................................................................................................................................................................................................................ATGTGCAGAACGTGCAGGTGCG.................221.000.00--1.00------------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTGGTG...............................................................201.000.00--1.00------------------------
...............................................................................................................................................................................................................................TGCAGGTTTGTTACATAGGTATACTCTG281.000.00---------------------1.00-----
.....................................................................................................................................................................ACATCTTTTTTTTTCCGGC..................................................................191.000.00-1.00-------------------------
...........................................................................................................................................................................................................................AACGTGCAGGTTTGTTACAGG..........211.000.00-1.00-------------------------
....................................................................................................................................................................................................................TGTGCAGAACGTGCAGGTTTGTTACAGGC.........291.000.00--1.00------------------------
......................................................................................................................................................................................................AGTTCTGGGATACATGTGCAGAACGTGCATT.....................311.000.00-1.00-------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCCTA...................................................................181.000.001.00--------------------------
.......................................................................................................................................................................ATCTTTTTTTTTCTTTTTGGAG.............................................................221.000.00-1.00-------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTA...............................................................2220.500.50---0.50-----------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTATTT............................................................2520.500.50----0.50----------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTAGC.............................................................2420.500.50--0.50------------------------
.....................................................................................................................................................................ACATCTTTTTTTTTCTTTTTTACTG............................................................2520.500.50-0.50-------------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTAA..............................................................2250.200.20-----0.20---------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTA...............................................................2190.110.11---0.11-----------------------
......................................................................................................................................................................CATCTTTTTTTTTCTTTTTTATG.............................................................2390.110.11----0.11----------------------

Antisense strand
ATTTTCTTATTGAAAAGATGTGAGGACAACTATAAAGGCAGTTTTTGACAAAAGAAAACATGCCTTCTCAATGACAATATTTTCATATTAACTTCCAGTGGTGAACACATATTTTAGATGGTTATAGTAATAGCTGCAATACCACTTTTTATTTTTTTAAACTTAACATCTTTTTTTTTCTTTTTTAATTATACTGTAAGTTCTGGGATACATGTGCAGAACGTGCAGGTTTGTTACATAGGTATACATG
...................................................................................................................((.((((..((((....))))....))))))........................................................................................................
.........................................................................................................106.........................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR343337DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343336SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................................................................................................................................AGTTCTGGGATACATGTGCAGACTG........................... 254.000.00-------1.00-2.00---1.00-------------
......................................................................................................................................................................................................AGTTCTGGGATACATGTGCACTG............................. 233.000.00---------1.00-1.00------1.00--------
......................................................................................................................................................................................................AGTTCTGGGATACATGTGCCTG.............................. 223.000.00----------1.00------------1.00-1.00-
......................................................................................................................................................................................................AGTTCTGGGATACATGCTGA................................ 202.000.00-----------2.00---------------
......................................................................................................................................................................................................AGTTCTGGGATACATGTCTG................................ 202.000.00-------1.00----1.00--------------
......................................................................................................................................................................................................AGTTCTGGGATACATGTGCAGCTG............................ 242.000.00------------1.00-------------1.00
........................................................................................TAACTTCCAGTGGTGACTAG.............................................................................................................................................. 201.000.00--------1.00------------------
......................................................................................................................................................................................................AGTTCTGGGATACATGTGCTG............................... 211.000.00--------------------1.00------
............................................................................................................................................................................TTTTTTTCTTTTTTAATTTGGA........................................................ 221.000.00----------------------1.00----