| (1) AGO1.ip | (1) AGO1.ip OTHER.mut | (1) AGO2.ip | (3) B-CELL | (12) BREAST | (13) CELL-LINE | (1) CERVIX | (4) HEART | (5) LIVER | (1) OTHER | (2) SKIN | (1) TESTES |
| TTTCTAATTTTATAACAAATTTCTGAATTATTTCACTGGTTTGGTTTAATTACTGGACTTGGACTAAGAACATTCCAGAAATCACTGCCTATGTAGTGGCTCTTATTCTTCTCTTTAATTCTTAGTTTCTTTCCTTATGACTCTGGGTTTTTGCTAATAGCCATGCCTACATATTTGTTTCTGTCTGTTTGTCATCTTAGTCTATGTGACCTGAGTGACCTAGAATACCTTGATGAAGAGTTCCATCAGA .......................................................(((.(((((...(((((...(((......)))..((((((((((((.(((...........((..(((((..((.........))..)))))..))...))).)))))...)))))))..)))))..)))))...)))......................................................... ..................................................51...................................................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | TAX577744(Rovira) total RNA. (breast) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | TAX577588(Rovira) total RNA. (breast) | SRR189787 | GSM532875(GSM532875) G547N. (cervix) | SRR191452(GSM715562) 178genomic small RNA (size selected RNA from . (breast) | SRR189782 | TAX577740(Rovira) total RNA. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR191629(GSM715739) 5genomic small RNA (size selected RNA from to. (breast) | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR191433(GSM715543) 170genomic small RNA (size selected RNA from . (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577590(Rovira) total RNA. (breast) | SRR037938(GSM510476) 293Red. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR553576(SRX182782) source: Testis. (testes) | TAX577579(Rovira) total RNA. (breast) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | TAX577738(Rovira) total RNA. (breast) | TAX577453(Rovira) total RNA. (breast) | SRR038862(GSM458545) MM472. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | TAX577745(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR553574(SRX182780) source: Heart. (Heart) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................ACTGGACTTGGACTAAGAAGGC................................................................................................................................................................................. | 22 | 22.00 | 0.00 | 10.00 | 1.00 | 1.00 | - | - | 1.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | 1.00 | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAGGCA................................................................................................................................................................................ | 23 | 6.00 | 0.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAGGG................................................................................................................................................................................. | 22 | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAGG.................................................................................................................................................................................. | 21 | 4.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAAGC................................................................................................................................................................................. | 22 | 3.00 | 0.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAAAC................................................................................................................................................................................. | 22 | 3.00 | 0.00 | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAGAC................................................................................................................................................................................. | 22 | 3.00 | 0.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAGGA................................................................................................................................................................................. | 22 | 3.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAATGC................................................................................................................................................................................. | 22 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGATGGC................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................ACTGGACTTGGACTAAGATGG.................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................TCTATGTGACCTGAGTGACC.............................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................................TGTCATCTTAGTCTATGTGACCTG..................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................ACTGGACTTGGACTAAAG..................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAGA.................................................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGATGTC................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................ACTGGACTTGGACTAAGA..................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................GTTTCTGTCTGTTTGTTCGT...................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAACGAA................................................................................................................................................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ....................................................CTGGACTTGGACTAAGAAGGCA................................................................................................................................................................................ | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAT................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAGGCT................................................................................................................................................................................ | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............TAACAAATTTCTGAACAC............................................................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...............................................................................................................................................................................TGTTTCTGTCTGTTTGTTTT....................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGATAC.................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................GACCTGAGTGACCTAGAATACC..................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................CTGGACTTGGACTAAGAAG................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAAG.................................................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAACGA.................................................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................TTTAATTCTTAGTTTCTTCA..................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAGCC................................................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAA................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................CTGAATTATTTCACTAATG................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAG................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................ACTGGACTTGGACTAAGAAGTC................................................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................TGTGACCTGAGTGACC.............................. | 16 | 4 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 |
| TTTCTAATTTTATAACAAATTTCTGAATTATTTCACTGGTTTGGTTTAATTACTGGACTTGGACTAAGAACATTCCAGAAATCACTGCCTATGTAGTGGCTCTTATTCTTCTCTTTAATTCTTAGTTTCTTTCCTTATGACTCTGGGTTTTTGCTAATAGCCATGCCTACATATTTGTTTCTGTCTGTTTGTCATCTTAGTCTATGTGACCTGAGTGACCTAGAATACCTTGATGAAGAGTTCCATCAGA .......................................................(((.(((((...(((((...(((......)))..((((((((((((.(((...........((..(((((..((.........))..)))))..))...))).)))))...)))))))..)))))..)))))...)))......................................................... ..................................................51...................................................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | TAX577744(Rovira) total RNA. (breast) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | TAX577588(Rovira) total RNA. (breast) | SRR189787 | GSM532875(GSM532875) G547N. (cervix) | SRR191452(GSM715562) 178genomic small RNA (size selected RNA from . (breast) | SRR189782 | TAX577740(Rovira) total RNA. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR191629(GSM715739) 5genomic small RNA (size selected RNA from to. (breast) | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR191433(GSM715543) 170genomic small RNA (size selected RNA from . (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577590(Rovira) total RNA. (breast) | SRR037938(GSM510476) 293Red. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR553576(SRX182782) source: Testis. (testes) | TAX577579(Rovira) total RNA. (breast) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | TAX577738(Rovira) total RNA. (breast) | TAX577453(Rovira) total RNA. (breast) | SRR038862(GSM458545) MM472. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | TAX577745(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR553574(SRX182780) source: Heart. (Heart) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................TTTGTTTCTGTCTGTTGT........................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................GTGATTTCTGGAATGTTC..................................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |