ID: uc002utf.1_intron_4_0_chr2_195281143_f.3p
GENE: BC038548(5)
chr2:195283832-195284081+


(1)
AGO2.ip 		(1)
B-CELL 		(7)
BRAIN 		(7)
BREAST 		(10)
CELL-LINE 		(2)
CERVIX 		(2)
LIVER 		(1)
OTHER 		(8)
SKIN 		(1)
UTERUS

Sense strand
AAATGGGTCAGATACTATTAAATCCTATGGGGGGAAAAATACAGTGAGGAAGGAGGAAGTGAAATGGTTAAGTAATGGTGCAATGTTATATAAGTGAGCAAGGAAGGATTAGCAGATAACTGTGTAAAGACCTGAAAGAACTGAGAGAACTAACTGTGGTTTTTGTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTAAGTACTCCAGGCAGATTTATAAAGGAAGCTGCTGGAAGGAATTCATTCCCTT
...............................................................................................................................((((..(((.((((...((((((((....))))))))...)))).))))))).......................................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040042(GSM532927)
G428N. (cervix)		TAX577746(Rovira)
total RNA. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040025(GSM532910)
G613T. (cervix)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................TGAGGAAGGAGGAAGTATAG..........................................................................................................................................................................................2014.000.00--3.004.00-1.002.00---1.00---1.00----1.00-1.00-------------------
.............................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTCTCG.....................................................246.000.003.003.00---------------------------------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCTCG.....................................................254.000.00-4.00---------------------------------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCCTT.....................................................254.000.004.00----------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTCGAG...........................................................294.000.003.001.00---------------------------------------
............................................TGAGGAAGGAGGAAGTATGG..........................................................................................................................................................................................203.000.00-----1.00---1.00------1.00------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTTCG............................................................282.000.002.00----------------------------------------
...............................................................................................................................................................TTTTTGTTGTTTGTTTGTTTGTTTCTTG...............................................................282.000.002.00----------------------------------------
......................................................................................................................................................................TGTTTGTTTGTTTGTTTGTTTGTTTGTCTGG.....................................................312.000.002.00----------------------------------------
...................................................................................................................................................................TGTTGTTTGTTTGTTTGTTTGTTTCGAG...........................................................282.000.00-2.00---------------------------------------
............................................TGAGGAAGGAGGAAGTCTAG..........................................................................................................................................................................................202.000.00--1.00--1.00-----------------------------------
...................................................................................................................................................................TGTTGTTTGTTTGTTTGTTTGTTTCACC...........................................................282.000.001.001.00---------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTCCC............................................................282.000.002.00----------------------------------------
.........................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTCCGC.....................................................282.000.002.00----------------------------------------
.........................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTCTCG.....................................................282.000.002.00----------------------------------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCTAC.....................................................252.000.002.00----------------------------------------
..........................................................................................................................................................................TGTTTGTTTGTTTGTTTGTTTGTCTGC.....................................................272.000.00-2.00---------------------------------------
...........................................................................................................................................................................................................................AAGGAAGCTGCTGGAACCAG...........202.000.00-----------2.00-----------------------------
............................................TGAGGAAGGAGGAAGTGTGGT.........................................................................................................................................................................................212.000.00---1.00-------------------------1.00-----------
............................................................................................................................................................................................................................AGGAAGCTGCTGGAAGG.............1741.751.75--------------------------------0.50-0.250.250.250.250.25--
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTGCAGC..........................................................301.000.001.00----------------------------------------
.............................................................................................................................................................................................................................GGAAGCTGCTGGAAGCAGC..........191.000.00------------1.00----------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTGGGC................................................................241.000.00-1.00---------------------------------------
..................................................................................................................................................................................................TTTAAGTACTCCAGGATAA.....................................191.000.00--------1.00--------------------------------
........................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTTTTCCAC..................................................321.000.001.00----------------------------------------
............................................TGAGGAAGGAGGAAGTGTGGC.........................................................................................................................................................................................211.000.00----------1.00------------------------------
............................................TGAGGAAGGAGGAAGTAA............................................................................................................................................................................................181.000.00----------------------------1.00------------
.........................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTTTTCGGG..................................................311.000.00-1.00---------------------------------------
...............................................................................................................................................................TTTTTGTTGTTTGTTTGTTCTGC....................................................................231.000.001.00----------------------------------------
............................................TGAGGAAGGAGGAAGTACG...........................................................................................................................................................................................191.000.00---------1.00-------------------------------
.......................................................................................................................................................................................................GTACTCCAGGCAGATGTTG................................191.000.00-------1.00---------------------------------
......................................................................................................................................................................TGTTTGTTTGTTTGTTTGTTTGTTTGTCCTT.....................................................311.000.00-1.00---------------------------------------
...........................................................................................................................................................................................................................AAGGAAGCTGCTGGAAGGAGC..........211.000.00--------1.00--------------------------------
...................................................................................................................................................................TGTTGTTTGTTTGTTTGTTTGTTTGATT...........................................................281.000.00-1.00---------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTCGGG...........................................................291.000.00-1.00---------------------------------------
.................................................................................................................................................................TTTGTTGTTTGTTTGTTTGTTTCTTA...............................................................261.000.00-1.00---------------------------------------
...............................................................................................................................................................TTTTTGTTGTTTGTTTGTTTGTTTAAG................................................................271.000.001.00----------------------------------------
............................................TGAGGAAGGAGGAAGTGTGG..........................................................................................................................................................................................201.000.00-------------------------------1.00---------
....................................................................................................................................................................GTTGTTTGTTTGTTTGTTTGTTTCGA............................................................261.000.00-1.00---------------------------------------
..........................................AGTGAGGAAGGAGGAAACAC............................................................................................................................................................................................201.000.00----1.00------------------------------------
........................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCTGC.....................................................291.000.00-1.00---------------------------------------
............................................TGAGGAAGGAGGAAGTACAG..........................................................................................................................................................................................201.000.00---------------1.00-------------------------
....................................................................................................................................TGAAAGAACTGAGAGAAGATG.................................................................................................211.000.00-----------------------1.00-----------------
........................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCCTG.....................................................291.000.00-1.00---------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTCCCG............................................................281.000.001.00----------------------------------------
............................................TGAGGAAGGAGGAAGTGTTG..........................................................................................................................................................................................201.000.00---1.00-------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTGGG..............................................................261.000.001.00----------------------------------------
.....................................................................................................................................GAAAGAACTGAGAGAAGATG.................................................................................................201.000.00------------------------------1.00----------
......................................................................................................................................................................TGTTTGTTTGTTTGTTTGTTTGTTTGTCTTA.....................................................311.000.00-1.00---------------------------------------
..................................................................................................................................................................................................TTTAAGTACTCCAGGCTAGG....................................201.000.00--------------------------1.00--------------
...................................................................................................................................................................TGTTGTTTGTTTGTTTGTTTGTTTCGG............................................................271.000.001.00----------------------------------------
..................................................................................................................................................................................................TTTAAGTACTCCAGGTTCG.....................................191.000.00-------------------------1.00---------------
............................................TGAGGAAGGAGGAAGTATC...........................................................................................................................................................................................191.000.00---1.00-------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTA...............................................................251.000.001.00----------------------------------------
............................................TGAGGAAGGAGGAAGTGTGGA.........................................................................................................................................................................................211.000.00-----1.00-----------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTTTCG...........................................................291.000.00----1.00------------------------------------
.........................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTTTTCGGC..................................................311.000.001.00----------------------------------------
.................................................................................................................................................................TTTGTTGTTTGTTTGTTTGTTTGTTTGGAC...........................................................301.000.001.00----------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTGTTTCC.........................................................311.000.001.00----------------------------------------
........................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCTGG.....................................................291.000.001.00----------------------------------------
...................................................................................................................................................................TGTTGTTTGTTTGTTTGTTTGTTTCGGG...........................................................281.000.001.00----------------------------------------
.......................................................................................................................................................................GTTTGTTTGTTTGTTTGTTTGTTTGTCTGC.....................................................301.000.00-1.00---------------------------------------
.................................................................................................................................................................TTTGTTGTTTGTTTGTTTGTTTGTTCTTC............................................................291.000.001.00----------------------------------------
...............................................................................................................................................................TTTTTGTTGTTTGTTTGTTTGAA....................................................................231.000.001.00----------------------------------------
...................................................................................................................................................................TGTTGTTTGTTTGTTTGTTTGTTTGTCTC..........................................................291.000.001.00----------------------------------------
...........................................................................................................................................................................................................................AAGGAAGCTGCTGGAACC.............181.000.00-----------------1.00-----------------------
..............................................................................................................................................................GTTTTTGTTGTTTGTTTGTTTCTG....................................................................241.000.001.00----------------------------------------
...........................................................................................................................................................................................................................AAGGAAGCTGCTGGAAC..............171.000.00------------------1.00----------------------
..................................................................................................................................................................................................TTTAAGTACTCCAGGAGAG.....................................191.000.00---------------------------1.00-------------
...................................................................................................................................................................TGTTGTTTGTTTGTTTGTTTGTTTGTTTGTC........................................................311.000.001.00----------------------------------------
................................................................................................................................................................TTTTGTTGTTTGTTTGTTTGTTTGTTC...............................................................271.000.00-1.00---------------------------------------
........................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCTTA.....................................................291.000.00-1.00---------------------------------------
........................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCTCC.....................................................291.000.00-1.00---------------------------------------
...............................................................................................................................................................TTTTTGTTGTTTGTTTGTTTGTTGTTG................................................................271.000.001.00----------------------------------------
................................................................................................................................................................TTTTGTTGTTTGTTTGTTTGTTTGTCTG..............................................................281.000.00----1.00------------------------------------
...................................................................................................................................................................TGTTGTTTGTTTGTTTGTTTGTTTGTTTCGAG.......................................................321.000.00-1.00---------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTCGT............................................................281.000.00-1.00---------------------------------------
........................................................................................................................................AGAACTGAGAGAACTCCTG...............................................................................................191.000.00--------------------1.00--------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTCCGC............................................................281.000.00-1.00---------------------------------------
...............................................................................................................................................................TTTTTGTTGTTTGTTTGTTTGTTTGTTTCGGG...........................................................321.000.001.00----------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTCTTG............................................................281.000.00----1.00------------------------------------
............................................TGAGGAAGGAGGAAGTGTG...........................................................................................................................................................................................191.000.00------------------------1.00----------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTGTTCG..........................................................301.000.001.00----------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTTGTC...........................................................291.000.001.00----------------------------------------
............................................TGAGGAAGGAGGAAGTACTG..........................................................................................................................................................................................201.000.00--1.00--------------------------------------
............................................TGAGGAAGGAGGAAGTATAA..........................................................................................................................................................................................201.000.00---1.00-------------------------------------
............................................TGAGGAAGGAGGAAGTAAAG..........................................................................................................................................................................................201.000.00------1.00----------------------------------
................................................................................................................................................................TTTTGTTGTTTGTTTGTTCTTG....................................................................221.000.001.00----------------------------------------
.....................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTTTGTTAGC.....................................................321.000.001.00----------------------------------------
..................................................................................................................................................................TTGTTGTTTGTTTGTTTGTTTGTTTCGGC...........................................................291.000.001.00----------------------------------------
................................................................................................................................................................TTTTGTTGTTTGTTTGTTTGTTTCGG................................................................261.000.001.00----------------------------------------
............................................TGAGGAAGGAGGAAGTTTA...........................................................................................................................................................................................191.000.00--1.00--------------------------------------
.......................................................................................................................................................................GTTTGTTTGTTTGTTTGTTTGTTTGTCC.......................................................281.000.00----1.00------------------------------------
....................................................................................................................................................................GTTGTTTGTTTGTTTGTTTGTTTGCA............................................................261.000.001.00----------------------------------------
...............................................................................................................................................................TTTTTGTTGTTTGTTTGTTTCCAG...................................................................241.000.001.00----------------------------------------
...................................................................................................................................................................TGTTGTTTGTTTGTTTGTTTGTTTCATC...........................................................281.000.001.00----------------------------------------
...............................................................................................................................................................TTTTTGTTGTTTGTTTGTTTGTTCTGG................................................................271.000.001.00----------------------------------------
............................................................................................................................................................TGGTTTTTGTTGTTTGTTTGTTT.......................................................................2340.250.250.25----------------------------------------
...................................................................................................................................CTGAAAGAACTGAGAGA......................................................................................................1740.250.25---------------------------------0.25-------
............................................TGAGGAAGGAGGAAGTGA............................................................................................................................................................................................1850.200.20---------------------------------------0.20-
.............................................................................................................................................................GGTTTTTGTTGTTTGTTTGTTTGT.....................................................................2490.110.11-0.11---------------------------------------

Antisense strand
AAATGGGTCAGATACTATTAAATCCTATGGGGGGAAAAATACAGTGAGGAAGGAGGAAGTGAAATGGTTAAGTAATGGTGCAATGTTATATAAGTGAGCAAGGAAGGATTAGCAGATAACTGTGTAAAGACCTGAAAGAACTGAGAGAACTAACTGTGGTTTTTGTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTAAGTACTCCAGGCAGATTTATAAAGGAAGCTGCTGGAAGGAATTCATTCCCTT
...............................................................................................................................((((..(((.((((...((((((((....))))))))...)))).))))))).......................................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040042(GSM532927)
G428N. (cervix)		TAX577746(Rovira)
total RNA. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040025(GSM532910)
G613T. (cervix)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................AATCCTATGGGGGGACT..................................................................................................................................................................................................................... 171.000.00----1.00------------------------------------
...................................................................................................................................................AACTAACTGTGGTTTTTTTTT.................................................................................. 211.000.00-------------1.00---------------------------
....................................................................................................................................................ACTAACTGTGGTTTTATTG................................................................................... 191.000.00--1.00--------------------------------------
...................................................................................................................................................AACTAACTGTGGTTTTTTTG................................................................................... 201.000.00--1.00--------------------------------------
..........................................................................ATGGTGCAATGTTATACG.............................................................................................................................................................. 181.000.00-------1.00---------------------------------
..........AGGATTTAATAGTATC................................................................................................................................................................................................................................ 1611.001.00----------------------1.00------------------
............ATAGGATTTAATAGTA.............................................................................................................................................................................................................................. 1620.500.50-------0.50---------------------------------
..................................TTCCTCACTGTATTTTT....................................................................................................................................................................................................... 1770.140.14----------------------------------------0.14