ID: uc002uru.2_intron_2_0_chr2_191077802_r.3p
GENE: (11)
chr2:191077752-191078001-


(2)
B-CELL
(2)
BRAIN
(1)
BREAST
(4)
CELL-LINE
(1)
CERVIX
(1)
HEART
(4)
LIVER
(4)
OTHER
(3)
SKIN
(1)
UTERUS

Sense strand
ATTCCACTTGTGGAATGATGTTTTGTTTTTGTAGCAGATTAGAAAAGTTTTGTTTGGTGCTTTGGCAGGATTAAGCTAGGGTATAATCTTTTATGAGATTTTGGCATATTTTAATATTATTTACATAGACACTCTGCCCATTTATTATAGACAATAAAGGAACTATTGGACTAACAGTAGTAAATTTTTTCCTCCAAAAGGTAATTAATAAAATGTCTCCAACATCTCTAAAGATCACACTAAGGCAACT
......................................................................................................((((........(((.......))).......)))).........(((.(((((.......)))))..))).............................................................................
...................................................................................................100..........................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR040010(GSM532895)
G529N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR189785SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343335SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR343336SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................................................................................................................................................AAAGGAACTATTGGATC..............................................................................1771.000.0071.00----------------------
......................................................................................................................................................................TGGACTAACAGTAGTAAATTTTTT............................................................2414.004.00----2.00-2.00----------------
......................................................................................................................................................................TGGACTAACAGTAGTAAATTT...............................................................2112.002.00----------1.001.00-----------
.............................................AGTTTTGTTTGGTGCTTTGGCAGG.....................................................................................................................................................................................2412.002.00-----2.00-----------------
.............................................................................................................................................................................................................TAATAAAATGTCTCCAACATC........................2111.001.00------------1.00----------
................................................................................................................................................................................................................................TCTCTAAAGATCACACTAAGGCAAC.2511.001.00--------1.00--------------
............................................................................................................................................................................................................................AACATCTCTAAAGATCACACTAAGGCA...2711.001.00-1.00---------------------
......................................................................................................................................................................................................................................AAGATCACACTAAGGCAACT2011.001.00-1.00---------------------
.......................TGTTTTTGTAGCAGATTAGAAAAGT..........................................................................................................................................................................................................2511.001.00--1.00--------------------
..............................................GTTTTGTTTGGTGCTTTGGCAGGA....................................................................................................................................................................................2411.001.00-------------1.00---------
.....................................................................................................................................................................................................................................AAAGATCACACTAAGGCAAC.2011.001.00-1.00---------------------
...CCACTTGTGGAATGATGTTTTGTTT..............................................................................................................................................................................................................................2511.001.00---1.00-------------------
........................................................................................................CATATTTTAATATTATTTACATAG..........................................................................................................................2411.001.00----------------1.00------
...................................................................................................................................................................................................................................CTAAAGATCACACTAAGGCAACT2311.001.00-------------------1.00---
.....................................................................................................................................................................................................................................AAAGATCACACTAAGGCA...1811.001.00--1.00--------------------
...........................................................................................................................................................................................................................CAACATCTCTAAAGATCACACTAAGGCA...2811.001.00---1.00-------------------
......................................................................................................................................................................TGGACTAACAGTAGTAAA..................................................................1811.001.00---1.00-------------------
.......................................................................................................................................................CAATAAAGGAACTATTGG.................................................................................1811.001.00-1.00---------------------
.........................................................................................................................................................................................................................................ATCACACTAAGGCAACTTTTG211.000.00--------------------1.00--
............................................................................................................................................................................................................................AACATCTCTAAAGATCACACTAAGGCAAC.2911.001.00--1.00--------------------
......CTTGTGGAATGATGTTTT..................................................................................................................................................................................................................................1811.001.00---------1.00-------------
........................................................................................................................................................................................................................CTCCAACATCTCTAAAG.................1730.330.33---------------------0.33-
.......................................................................................................................................................................................................................TCTCCAACATCTCTAAAG.................1830.330.33---------------------0.33-

Antisense strand
ATTCCACTTGTGGAATGATGTTTTGTTTTTGTAGCAGATTAGAAAAGTTTTGTTTGGTGCTTTGGCAGGATTAAGCTAGGGTATAATCTTTTATGAGATTTTGGCATATTTTAATATTATTTACATAGACACTCTGCCCATTTATTATAGACAATAAAGGAACTATTGGACTAACAGTAGTAAATTTTTTCCTCCAAAAGGTAATTAATAAAATGTCTCCAACATCTCTAAAGATCACACTAAGGCAACT
......................................................................................................((((........(((.......))).......)))).........(((.(((((.......)))))..))).............................................................................
...................................................................................................100..........................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR040010(GSM532895)
G529N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR189785SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343335SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR343336SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.................................................................................................................................CACTCTGCCCATTTAAG........................................................................................................ 171.000.00---------------1.00-------
...................................................................................................................................................................................GTAAATTTTTTCCTCCAG..................................................... 181.000.00-------1.00---------------
.......................TGTTTTTGTAGCAGACCCA................................................................................................................................................................................................................ 191.000.00-----------------1.00-----
............GAATGATGTTTTGTTAAG............................................................................................................................................................................................................................ 181.000.00------------------1.00----
..................................................................................................................................................................................................................AGAGATGTTGGAGACATTT..................... 1911.001.00--------------1.00--------
...................................CAAAACTTTTCTAATCT...................................................................................................................................................................................................... 1740.500.50----------------------0.50