| (2) AGO2.ip | (4) B-CELL | (5) BREAST | (24) CELL-LINE | (1) CERVIX | (1) FIBROBLAST | (1) HELA | (2) LIVER | (1) OTHER | (4) SKIN | (1) TESTES | (1) XRN.ip |
| CAGATATCACTGGAAAAAAAATTCCTGAACCAGTGATCATTTGTCTTCAGAGTATATTAAAAGATACGAAGACACTTTTTGTAGCTTTAAATGAGTTTATTTCTCTAGTACGGTAGCAAAAACAAAAGTGTTAATTATATTTTTCTTTCTCTTTTTTCCTCAAAACACCATCCTTTTAATTTCCTTGAATGGATATGAAGGCACCAGTCTGCTGAGTGGCGGTCGTGAATCTGTACTTGTAGAGTGGCGC .....................................................................................................................................................................((..((((.(((((.....))))).)))).))..................................................... ......................................................................................................................................135..............................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR553576(SRX182782) source: Testis. (testes) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR037931(GSM510469) 293GFP. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR040018(GSM532903) G701N. (cervix) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR029124(GSM416753) HeLa. (hela) | SRR037936(GSM510474) 293cand1. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191586(GSM715696) 197genomic small RNA (size selected RNA from . (breast) | SRR343336 | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189782 | SRR191621(GSM715731) 16genomic small RNA (size selected RNA from t. (breast) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR033711(GSM497056) GCB DLBCL (GCB110). (B cell) | SRR191394(GSM715504) 23genomic small RNA (size selected RNA from t. (breast) | SRR191622(GSM715732) 175genomic small RNA (size selected RNA from . (breast) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR343335 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................TTTCCTTGAATGGATATGAAGC................................................. | 22 | 1 | 13.00 | 1.00 | 13.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTCCTTGAATGGATATGAAGT................................................. | 21 | 1 | 11.00 | 3.00 | 1.00 | - | - | - | - | - | 4.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTCCTTGAATGGATATGAAGA................................................. | 21 | 1 | 9.00 | 3.00 | - | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - |
| ....................................................................................................................................................................................TTCCTTGAATGGATATGAAGTAT............................................... | 23 | 1 | 6.00 | 3.00 | - | - | 2.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTCCTTGAATGGATATGAAG.................................................. | 20 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTCCTTGAATGGATATGAAGTTTT.............................................. | 24 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TTTTTCTTTCTCTTTTTTCG........................................................................................... | 20 | 3.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................GTGAATCTGTACTTGTAGA....... | 19 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TTTTTCTTTCTCTTTTTTCCCTAG....................................................................................... | 24 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................TGAATCTGTACTTGTAGAGTGGCGC | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................TTTTTGTAGCTTTAAGTAA............................................................................................................................................................ | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TCCTTGAATGGATATGAAGA................................................. | 20 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................CCTTGAATGGATATGAAG.................................................. | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................................CGGTCGTGAATCTGTACTTGTAGAGTGGC.. | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TTTTTCTTTCTCTTTTTTCCTGTTT...................................................................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................TTTTTCTTTCTCTTTTTTCCAAG........................................................................................ | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................................................CTGTACTTGTAGAGTGGCGC | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTCCTTGAATGGATATGAAGAA................................................ | 22 | 1 | 1.00 | 3.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTTCCTTGAATGGATATGAAGAA................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................................................................................TGGCGGTCGTGAATCTGTACTTGTAGA....... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTCCTTGAATGGATATGAAGTAGA.............................................. | 24 | 1 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................CAAAACACCATCCTTTTTTC...................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................TTCTTTCTCTTTTTTCCG.......................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTTAATTTCCTTGACTCT.......................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................CGTGAATCTGTACTTGTAGAGTGGCGC | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TTTTCTTTCTCTTTTTTCACAG........................................................................................ | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................TTTTTCTTTCTCTTTTTTCCTGCTT...................................................................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................CGTGAATCTGTACTTGTAGA....... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TGAATCTGTACTTGTAGAGTGGCGCGATA | 29 | 1 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TTTCTTTCTCTTTTTTCCTTTG....................................................................................... | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TTTCCTTGAATGGATATGAAG.................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................CTGTACTTGTAGAGTGGC.. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TATATTTTTCTTTCTCTTTTAAG............................................................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................ATTTTTCTTTCTCTTTTTAC............................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................TTTTTCTTTCTCTTTTTTCCTTGCC...................................................................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................CGTGAATCTGTACTTGTAGAGTGG... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................GTGAATCTGTACTTGTAGAG...... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTCCTTGAATGGATATGAAGTATA.............................................. | 24 | 1 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TTTTCTTTCTCTTTTTTCCGTGG....................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................TGAACCAGTGATCATTTGTG............................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................CGGTCGTGAATCTGTACTTGTAGAGTGG... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................AATCTGTACTTGTAGAGTGGCGCATA | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................TATTTTTCTTTCTCTTACAT............................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................TGAATCTGTACTTGTAGAG...... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................CCTTGAATGGATATGAAGTAG............................................... | 21 | 1 | 1.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GGCGGTCGTGAATCTGTACTTGTAGAGT..... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................GTCGTGAATCTGTACTTGTAGAGT..... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TATTTTTCTTTCTCTTTATC............................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................ATCTGTACTTGTAGAG...... | 16 | 3 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.67 | - | - |
| ...........................................................................TTTTTGTAGCTTTAAATG............................................................................................................................................................. | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| .............................................................................................................ACGGTAGCAAAAACA.............................................................................................................................. | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CAGATATCACTGGAAAAAAAATTCCTGAACCAGTGATCATTTGTCTTCAGAGTATATTAAAAGATACGAAGACACTTTTTGTAGCTTTAAATGAGTTTATTTCTCTAGTACGGTAGCAAAAACAAAAGTGTTAATTATATTTTTCTTTCTCTTTTTTCCTCAAAACACCATCCTTTTAATTTCCTTGAATGGATATGAAGGCACCAGTCTGCTGAGTGGCGGTCGTGAATCTGTACTTGTAGAGTGGCGC .....................................................................................................................................................................((..((((.(((((.....))))).)))).))..................................................... ......................................................................................................................................135..............................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR553576(SRX182782) source: Testis. (testes) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR037931(GSM510469) 293GFP. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR040018(GSM532903) G701N. (cervix) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR029124(GSM416753) HeLa. (hela) | SRR037936(GSM510474) 293cand1. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191586(GSM715696) 197genomic small RNA (size selected RNA from . (breast) | SRR343336 | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189782 | SRR191621(GSM715731) 16genomic small RNA (size selected RNA from t. (breast) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR033711(GSM497056) GCB DLBCL (GCB110). (B cell) | SRR191394(GSM715504) 23genomic small RNA (size selected RNA from t. (breast) | SRR191622(GSM715732) 175genomic small RNA (size selected RNA from . (breast) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR343335 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................TGAGTGGCGGTCGTGAAT.................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................TTTAAATGAGTTTATATGA.................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................TCATATCCATTCAAG.................................................... | 15 | 7 | 0.29 | 0.29 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.29 |