| (1) B-CELL | (2) BRAIN | (1) BREAST | (10) CELL-LINE | (1) HEART | (1) HELA | (3) LIVER | (1) OTHER | (4) UTERUS |
| TCCTCTGTAAGTTTGTAATATTTCCAAGTAAGTTCATACACACATGCACATGCAAACACATTGGGGCTTATTTCTTTTATACTTATTTTACTTCTTATTGCTCTAGATTGCTAATTTACCTTTAACACTTCCCTGGTTTTAGGATATTAACATTCATTGCTAATATATGTACATACTGATTTTTAATTTCTTTTAAATAGTGCTGGGCCTAAAGGAGATAACATTTATGAATGGAGATCAACTATACTTG ...............................................................................................((((((....((.((.((((...(((..(((.........)))..)))..)))).)).))...)).))))..................................................................................... ............................................................................77..........................................................................................169............................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037937(GSM510475) 293cand2. (cell line) | SRR015361(GSM380326) Memory B cells (MM55). (B cell) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR029128(GSM416757) H520. (cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | TAX577453(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................CTTATTTCTTTTATACTTATTTTACT.............................................................................................................................................................. | 26 | 1 | 19.00 | 19.00 | 8.00 | - | 7.00 | 3.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AACATTCATTGCTAAGA..................................................................................... | 17 | 11.00 | 0.00 | - | - | - | - | 4.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ....................................................................................................................................................AACATTCATTGCTAAGT..................................................................................... | 17 | 3.00 | 0.00 | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................CTTATTTCTTTTATACTTATTTTACC.............................................................................................................................................................. | 26 | 3.00 | 0.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................GGGCTTATTTCTTTTATACTTATTTTACC.............................................................................................................................................................. | 29 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................................................ATGGAGATCAACTATACTTGGACC | 24 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................CTTATTTTACTTCTTATTG...................................................................................................................................................... | 19 | 2 | 2.00 | 2.00 | 1.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AACATTCATTGCTAAGAA.................................................................................... | 18 | 2.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ...........................................................................................................................................................................................................TGGGCCTAAAGGAGATAACATTTATGA.................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TACATACTGATTTTTAAT............................................................... | 18 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AACATTCATTGCTAACAGC................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AAACACATTGGGGCTTATTTCTTTTATACTTATT................................................................................................................................................................... | 34 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AACATTCATTGCTAACGGT................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .........................................................................................................................................................................TACATACTGATTTTTATTCT............................................................. | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................ATATGTACATACTGATTGT................................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................CTTATTTCTTTTATACTTATTTTACTTCTTACTG...................................................................................................................................................... | 34 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................AACATTCATTGCTAAGGA.................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................CTTATTTTACTTCTTCAG....................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................AACATTCATTGCTAACCG.................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................GGCTTATTTCTTTTATACTTATTTTATT.............................................................................................................................................................. | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................AACATTCATTGCTAAGTC.................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................CTTATTTCTTTTATACTTATTTTACTTCTTAT........................................................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AACATTCATTGCTAACG..................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................TTTATGAATGGAGATCAAC........ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AACATTCATTGCTAAATA.................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................GGCTTATTTCTTTTATACTTATTTTACC.............................................................................................................................................................. | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................CAAACACATTGGGGCTTATT.................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CATACTGATTTTTAATTTCTTTTAAATAGAA................................................ | 31 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ....................................................................................................................................................................................................................AGGAGATAACATTTATGAATGGAGATC........... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................TTTTTAATTTCTTTTAAATAGAA................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..................................................................CTTATTTCTTTTATACTTATTTTACTTCTCAT........................................................................................................................................................ | 32 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................AACATTCATTGCTAAAAG.................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................TGGGCCTAAAGGAGATAACATT......................... | 22 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ......................................................................................................................................................................................................AGTGCTGGGCCTAAAGGAGATAACA........................... | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ................................................................................................................................................TATTAACATTCATTGCT......................................................................................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TTTATACTTATTTTACT.............................................................................................................................................................. | 17 | 6 | 0.17 | 0.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TCCTCTGTAAGTTTGTAATATTTCCAAGTAAGTTCATACACACATGCACATGCAAACACATTGGGGCTTATTTCTTTTATACTTATTTTACTTCTTATTGCTCTAGATTGCTAATTTACCTTTAACACTTCCCTGGTTTTAGGATATTAACATTCATTGCTAATATATGTACATACTGATTTTTAATTTCTTTTAAATAGTGCTGGGCCTAAAGGAGATAACATTTATGAATGGAGATCAACTATACTTG ...............................................................................................((((((....((.((.((((...(((..(((.........)))..)))..)))).)).))...)).))))..................................................................................... ............................................................................77..........................................................................................169............................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037937(GSM510475) 293cand2. (cell line) | SRR015361(GSM380326) Memory B cells (MM55). (B cell) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR029128(GSM416757) H520. (cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | TAX577453(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) |
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