ID: uc002ugc.1_intron_4_0_chr2_171504577_r.5p
GENE: AK127400(5)
chr2:171506232-171506481-


(2)
AGO2.ip 		(2)
B-CELL 		(4)
BRAIN 		(3)
BREAST 		(23)
CELL-LINE 		(3)
CERVIX 		(1)
HEART 		(1)
HELA 		(5)
LIVER 		(1)
OTHER 		(5)
SKIN 		(1)
XRN.ip

Sense strand
GAAACTGAGGCCCATAAAATTGAATGGCTCATCTCAGATCAAGTGGCCAGGTGGGTACCCAACCCTAGATTTCTTACTTCTTGTTCCAATAGGTGTTTTGTTTTTTTTTTTTTTTACACTATAGCATATGGTCCTTTTTTTTTTTTTTTGAGATAGTCTCACTGTTGCCCAGGCTGGAGTGTAGTGGTGTGATCTTGGCTCACTGCAATTTCTACCTCCCAGGTTCAAGCTATTCTCCTGCCTCAGCCTC
....................................................................................................................((((.((((...(((....................(((((.....)))))..))).)))).)))).....................................................................
........................................................................................89..........................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR189786SRR189787SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532930(GSM532930)
G702T. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR343334SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532929(GSM532929)
G702N. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029127(GSM416756)
A549. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCCGT.........................................................................235.000.00---3.002.00-------------------------------------------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCTATAT.......................................................................253.000.00--3.00---------------------------------------------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCTGTAA.......................................................................253.000.00--3.00---------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTCTTG....................................................................................................................................253.000.00-3.00----------------------------------------------------
............................................................................................................................................................................GCTGGAGTGTAGTGGTGT............................................................1802.002.00---------1.00--------------1.00-----------------------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCAT..........................................................................222.000.00-----2.00------------------------------------------------
....................................................................................................................................................................TTGCCCAGGCTGGAGTGTAGGAGG..............................................................242.000.002.00-----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTCTTG.....................................................................................................................................242.000.00-2.00----------------------------------------------------
................................................................................................................................................................ACTGTTGCCCAGGCTGGACTCA....................................................................2202.001.00-2.00----------------------------------------------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCTGTAT.......................................................................252.000.00--2.00---------------------------------------------------
............................................................................................................................................................TCTCACTGTTGCCCAGGCCGGT........................................................................2202.001.00----2.00-------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTCGGC......................................................................................................................................232.000.001.001.00----------------------------------------------------
................................................................................................................................TGGTCCTTTTTTTTTTGGTT......................................................................................................201.000.00----------------------------------------1.00-------------
....................................................................................................TTTTTTTTTTTTTTTACACTAATTT.............................................................................................................................251.000.00-----------1.00------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTCGAT.......................................................................................................................................251.000.001.00-----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTGAT.....................................................................................................................................271.000.00-1.00----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTGAT......................................................................................................................................261.000.00-1.00----------------------------------------------------
.....................................................................................................TTTTTTTTTTTTTTACACTATCAA.............................................................................................................................241.000.00-----------1.00------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTTCGAA...................................................................................................................................261.000.00-1.00----------------------------------------------------
.....................................................................................................................................................................TGCCCAGGCTGGAGTGTAGTGGATA............................................................251.000.00-----------------------1.00------------------------------
...............................................................................................................................ATGGTCCTTTTTTTTTACT........................................................................................................191.000.001.00-----------------------------------------------------
............................................................................................................................................................TCTCACTGTTGCCCAGGCTGCAC.......................................................................231.000.00-1.00----------------------------------------------------
..........................................................................................................................................................................AGGCTGGAGTGTAGTGGTGATTG.........................................................231.000.001.00-----------------------------------------------------
...............................................................................................................................ATGGTCCTTTTTTTTTTTTGAG.....................................................................................................221.000.00-1.00----------------------------------------------------
............................................................................................................................................................................GCTGGAGTGTAGTGGTGTGTCG........................................................221.000.00----------------1.00-------------------------------------
...........................................................................................................................................................................GGCTGGAGTGTAGTGGTTATC..........................................................211.000.00-------------------------------------------1.00----------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCTGTAGA......................................................................261.000.00--------------------------------------1.00---------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCCGA.........................................................................231.000.00------------------------------1.00-----------------------
........................................................................................................................................................................CCAGGCTGGAGTGTAGTGGTTTC...........................................................231.000.00-------------1.00----------------------------------------
......................................................................TTCTTACTTCTTGTTTCT..................................................................................................................................................................181.000.00------------------------------------------1.00-----------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTCTGT....................................................................................................................................251.000.00-1.00----------------------------------------------------
............................TCATCTCAGATCAAGCAA............................................................................................................................................................................................................181.000.00-----------------------------1.00------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTCTCC.....................................................................................................................................241.000.001.00-----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTTACGG...................................................................................................................................261.000.001.00-----------------------------------------------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCTATAC.......................................................................251.000.00--1.00---------------------------------------------------
...........................................................................................................................................................GTCTCACTGTTGCCCAGGCTGTAA.......................................................................2401.001.00--1.00---------------------------------------------------
.................................................................................................................................................................CTGTTGCCCAGGCTGGAGTGTAGTGGAGGG...........................................................301.000.00--------------------------------1.00---------------------
........................................................................................ATAGGTGTTTTGTTTTTTTTTTCTC.........................................................................................................................................251.000.00-1.00----------------------------------------------------
.....................................................................................................................................................................TGCCCAGGCTGGAGTGTAGTGGTGTAT..........................................................271.000.00-1.00----------------------------------------------------
...............................................................................................TTTTGTTTTTTTTTTTTTTTATTGG..................................................................................................................................251.000.00-----------1.00------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTGAT..........................................................................................................................................221.000.001.00-----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTCGAG....................................................................................................................................251.000.001.00-----------------------------------------------------
.....................................................................................................................................................................TGCCCAGGCTGGAGTGTAGCGCG..............................................................231.000.001.00-----------------------------------------------------
..............................................................................................GTTTTGTTTTTTTTTTTTTTCTTG....................................................................................................................................241.000.001.00-----------------------------------------------------
..................................................................................................................................................................................................TTGGCTCACTGCAATTCAC.....................................191.000.00----------1.00-------------------------------------------
................................................................................................................................................................................................TCTTGGCTCACTGCAATTTCCGAC..................................241.000.00-1.00----------------------------------------------------
...........................................................................................................................................................................................TGTGATCTTGGCTCAAGA.............................................181.000.00---------------1.00--------------------------------------
..............................................................................................GTTTTGTTTTTTTTTTTTTTCGG.....................................................................................................................................231.000.001.00-----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTTAAGGG..................................................................................................................................271.000.001.00-----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTCT.......................................................................................................................................251.000.001.00-----------------------------------------------------
....................................................................................................TTTTTTTTTTTTTTTACACTATAAAG............................................................................................................................261.000.00--------1.00---------------------------------------------
......................................................................................................................................................................GCCCAGGCTGGAGTGTAGTGGAAAG...........................................................251.000.001.00-----------------------------------------------------
..............................................................................................................................................................................................................................GTTCAAGCTATTCTCCTGCCTAAAT...251.000.00-----------------------------------------------1.00------
...........................................................................................................................................................GTCTCACTGTTGCCCAGGCTGTAAT......................................................................2501.001.00-------1.00----------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTGA.......................................................................................................................................251.000.001.00-----------------------------------------------------
..............................................................................................GTTTTGTTTTTTTTTTTTTCGCG.....................................................................................................................................231.000.001.00-----------------------------------------------------
............................................................................................GTGTTTTGTTTTTTTTTTTTTCC.......................................................................................................................................231.000.00------------1.00-----------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTCG......................................................................................................................................261.000.001.00-----------------------------------------------------
....................................................................................................................................................................TTGCCCAGGCTGGAGTGTAGCGCT..............................................................241.000.00-1.00----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTGGAT.......................................................................................................................................251.000.00-1.00----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTCGA.....................................................................................................................................271.000.001.00-----------------------------------------------------
................................................................................................................................TGGTCCTTTTTTTTTTTTTTCGG...................................................................................................231.000.00-1.00----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTCGAG......................................................................................................................................231.000.00-1.00----------------------------------------------------
....................................................................................................................................................................TTGCCCAGGCTGGAGTGTAGTGGATCG...........................................................271.000.00-1.00----------------------------------------------------
.......................................................................................................TTTTTTTTTTTTACACTATCAGC............................................................................................................................231.000.00--1.00---------------------------------------------------
............................................................................................................................................................TCTCACTGTTGCCCAGGCTAGA........................................................................221.000.00---------------------1.00--------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTCGTA......................................................................................................................................231.000.001.00-----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTCCCC......................................................................................................................................261.000.001.00-----------------------------------------------------
...............................................................................................................................ATGGTCCTTTTTTTTTTAC........................................................................................................191.000.00-1.00----------------------------------------------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCTACA........................................................................241.000.00----------------------------------1.00-------------------
..................................................................................................................................................................TGTTGCCCAGGCTGGAGTGTAGTGGGAAG...........................................................291.000.00-----------------1.00------------------------------------
...........................................................................................................................................................GTCTCACTGTTGCCCAGGCTGTAAG......................................................................2501.001.00------------------1.00-----------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTCCCC.......................................................................................................................................251.000.001.00-----------------------------------------------------
..................................................................................................................................................................TGTTGCCCAGGCTGGAGTGTAGCGCT..............................................................261.000.001.00-----------------------------------------------------
....................................................................................................TTTTTTTTTTTTTTTACACTCTTT..............................................................................................................................241.000.00--------1.00---------------------------------------------
...............................................................................................................................................................................................................................TTCAAGCTATTCTCCTGCCTCAGCCCTG281.000.00------------1.00-----------------------------------------
................................................................................................................................................................ACTGTTGCCCAGGCTGGAGTGTGC..................................................................241.000.001.00-----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTCC........................................................................................................................................241.000.001.00-----------------------------------------------------
.......................................................................................................................................................................CCCAGGCTGGAGTGTAGTGGTTTTT..........................................................251.000.00---------------------------------------------------1.00--
...........................................................................................................................................................GTCTCACTGTTGCCCAGGCTG..........................................................................2101.001.00------1.00-----------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTCTTC.....................................................................................................................................241.000.001.00-----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTTCTCC...................................................................................................................................261.000.001.00-----------------------------------------------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCCTTT........................................................................241.000.00-----1.00------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTTCGC....................................................................................................................................281.000.001.00-----------------------------------------------------
...............................................................................................TTTTGTTTTTTTTTTTTTTTACGGTT.................................................................................................................................261.000.001.00-----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTTCAGC...................................................................................................................................261.000.00-1.00----------------------------------------------------
..................................................................................................................................................................TGTTGCCCAGGCTGGAGTGTAGTCGTC.............................................................271.000.001.00-----------------------------------------------------
..................................................................................................................................GTCCTTTTTTTTTTTTTTCTTA..................................................................................................221.000.00-1.00----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTCCAT.......................................................................................................................................251.000.001.00-----------------------------------------------------
........................................................................................ATAGGTGTTTTGTTTTTTTTTTTTTCTGC.....................................................................................................................................291.000.001.00-----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTTTTC....................................................................................................................................281.000.001.00-----------------------------------------------------
................................................................................................................................TGGTCCTTTTTTTTTTTTCGAG....................................................................................................221.000.001.00-----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTCAGC....................................................................................................................................281.000.00-1.00----------------------------------------------------
................................................................................................................................TGGTCCTTTTTTTTTTTTTCTGG...................................................................................................231.000.001.00-----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTGAT.......................................................................................................................................251.000.001.00-----------------------------------------------------
.....................................................................................................................................................................TGCCCAGGCTGGAGTGTAGCGGG..............................................................231.000.00-1.00----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTTTCG....................................................................................................................................281.000.001.00-----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTGGAG........................................................................................................................................241.000.00-1.00----------------------------------------------------
......................................................................................................................................................................GCCCAGGCTGGAGTGTAGTGGTCTG...........................................................251.000.00--------------------------1.00---------------------------
............................................................................................................................................................................GCTGGAGTGTAGTGGTTAAA..........................................................201.000.00----------------------1.00-------------------------------
......................................................................................................................................................................GCCCAGGCTGGAGTGTATTTG...............................................................211.000.00---------------------------1.00--------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTGA...........................................................................................................................................211.000.00-1.00----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTTCGCT...................................................................................................................................261.000.001.00-----------------------------------------------------
................................................................................................................................................................ACTGTTGCCCAGGCTGGA........................................................................1801.001.00-------1.00----------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTTGCAG...................................................................................................................................291.000.00-1.00----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTGA.........................................................................................................................................231.000.00-1.00----------------------------------------------------
...............................................................................................................................................................................................................................TTCAAGCTATTCTCCTGCCATC.....221.000.00----1.00-------------------------------------------------
...............................................................................................................................ATGGTCCTTTTTTTTTTGAG.......................................................................................................201.000.00-1.00----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTTCTTG...................................................................................................................................261.000.001.00-----------------------------------------------------
...................................................................................................................................TCCTTTTTTTTTTTTTTTGAAAGG...............................................................................................241.000.00---------------------------------------------1.00--------
............................................................................................................................................................TCTCACTGTTGCCCAGGC............................................................................1801.001.00-------1.00----------------------------------------------
.........................................................................................................................................................................CAGGCTGGAGTGTAGTGGTTGAC..........................................................231.000.00-----------------1.00------------------------------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCTAC.........................................................................231.000.00--1.00---------------------------------------------------
.........................................................................................TAGGTGTTTTGTTTTTTTTTTTTTTTGTGG...................................................................................................................................301.000.001.00-----------------------------------------------------
............................................................................................................................................................TCTCACTGTTGCCCAGGCTGGGAA......................................................................241.000.00---1.00--------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTAATA.......................................................................................................................................251.000.001.00-----------------------------------------------------
.................................................................................................................................................................CTGTTGCCCAGGCTGGAGTGTATTGA...............................................................261.000.00---------------1.00--------------------------------------
...............................................................................................................................................................................................................................TTCAAGCTATTCTCCTGCCTCAGCCTCACTA311.000.00------------1.00-----------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTTTGAT...................................................................................................................................291.000.001.00-----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTCCC........................................................................................................................................241.000.001.00-----------------------------------------------------
...........................................................................................................................................................................GGCTGGAGTGTAGTGGTGAAGT.........................................................221.000.00-------------1.00----------------------------------------
..............................................................................................GTTTTGTTTTTTTTTTTTTCGGG.....................................................................................................................................231.000.00-1.00----------------------------------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTTGAC....................................................................................................................................281.000.00-1.00----------------------------------------------------
..............................................................................................GTTTTGTTTTTTTTTTTTTCCCG.....................................................................................................................................231.000.001.00-----------------------------------------------------
.............................................................................................................................................................................CTGGAGTGTAGTGGTTATC..........................................................191.000.00------------------------------------1.00-----------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTCTGC......................................................................................................................................261.000.00-1.00----------------------------------------------------
................................................................................................................................................................................................................................TCAAGCTATTCTCCTTATG.......191.000.00-------------------1.00----------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTTCCCG....................................................................................................................................251.000.001.00-----------------------------------------------------
....................................................................................................................................................................TTGCCCAGGCTGGAGTGTAGCGTT..............................................................241.000.001.00-----------------------------------------------------
.............................................................................................................................ATATGGTCCTTTTTTTTTTAAC.......................................................................................................221.000.00-1.00----------------------------------------------------
.............................................................................................................................................................................CTGGAGTGTAGTGGTGTG...........................................................1801.001.00-------------------------------------1.00----------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTCC.........................................................................................................................................231.000.001.00-----------------------------------------------------
.............................................................................................TGTTTTGTTTTTTTTTTTTTCGTA.....................................................................................................................................241.000.001.00-----------------------------------------------------
..........................................................................................................................................................AGTCTCACTGTTGCCCAGGCTTT.........................................................................231.000.00--------------------------------------------------1.00---
..........................................................................................................................................................................AGGCTGGAGTGTAGTGGTGTGAAA........................................................241.000.00-------------------------------1.00----------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTTTTTGC......................................................................................................................................261.000.001.00-----------------------------------------------------
..........................................................................................................................................................................AGGCTGGAGTGTAGTGGTGTGGTAA.......................................................251.000.00--------------------------------------------1.00---------
.............................................................................................TGTTTTGTTTTTTTTTTTTTCGGC.....................................................................................................................................241.000.00-1.00----------------------------------------------------
....................................................................................................................................................................TTGCCCAGGCTGGAGTGTAGGCAT..............................................................241.000.001.00-----------------------------------------------------
..........................................................................................................................................................................AGGCTGGAGTGTAGTGGTGTCATA........................................................241.000.00----------------------------1.00-------------------------
..........................................................................................AGGTGTTTTGTTTTTTTTTTCTCC........................................................................................................................................241.000.00-1.00----------------------------------------------------
................................................................................................TTTGTTTTTTTTTTTTTTTACAC...................................................................................................................................2330.330.330.33-----------------------------------------------------

Antisense strand
GAAACTGAGGCCCATAAAATTGAATGGCTCATCTCAGATCAAGTGGCCAGGTGGGTACCCAACCCTAGATTTCTTACTTCTTGTTCCAATAGGTGTTTTGTTTTTTTTTTTTTTTACACTATAGCATATGGTCCTTTTTTTTTTTTTTTGAGATAGTCTCACTGTTGCCCAGGCTGGAGTGTAGTGGTGTGATCTTGGCTCACTGCAATTTCTACCTCCCAGGTTCAAGCTATTCTCCTGCCTCAGCCTC
....................................................................................................................((((.((((...(((....................(((((.....)))))..))).)))).)))).....................................................................
........................................................................................89..........................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR189786SRR189787SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532930(GSM532930)
G702T. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR343334SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532929(GSM532929)
G702N. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029127(GSM416756)
A549. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
...........................CTCATCTCAGATCAAGG.............................................................................................................................................................................................................. 172.000.00---------------------------------1.00-----1.00--------------
...........................CTCATCTCAGATCAAGGT............................................................................................................................................................................................................. 182.000.00----------2.00-------------------------------------------
...........................................................................................GGTGTTTTGTTTTTTTTTTTTTTACCA.................................................................................................................................... 271.000.00-------------------------1.00----------------------------
.........................................................................................................................................................TAGTCTCACTGTTGCCCACATT........................................................................... 221.000.00---1.00--------------------------------------------------
...........................................................................................................................................................................................................................AGGAGAATAGCTTGAACCTG........... 2001.001.00-----------------------------------1.00------------------
...............................................................................................................................................................................................................................TTCAAGCTATTCTCCTGCAACG..... 221.000.00----------------1.00-------------------------------------
...................................................................................................................................................................................................................................AGCTATTCTCCTGCCTCAGAAA. 221.000.00--------------------1.00---------------------------------
...................................................................................................................................................................................................................CTACCTCCCAGGTTCAAGCTCGG................ 231.000.00------------------1.00-----------------------------------
........................................................................................................................................................................................................CACTGCAATTTCTACTG................................. 171.000.00-----1.00------------------------------------------------
............................................................................................................................................................TCTCACTGTTGCCCAGGCTATG........................................................................ 221.000.00---1.00--------------------------------------------------
...........................................................................................GGTGTTTTGTTTTTTTTTTTTTTACA..................................................................................................................................... 261.000.00--------------1.00---------------------------------------
...........................CTCATCTCAGATCAAGGTG............................................................................................................................................................................................................ 191.000.00----------------------------------------------1.00-------
......................................................................................................................................................................................................................AGAATAGCTTGAACCTGGGAGG.............. 2201.001.00------1.00-----------------------------------------------
.......................................................................................................................................................................................................................GAATAGCTTGAACCTGGGAG............... 2001.001.00---------1.00--------------------------------------------
...............................................................................................................................................................................................................................TTCAAGCTATTCTCCTAAT........ 191.000.00-------------------------------------------------1.00----
...........................................................................................................................................................................GGCTGGAGTGTAGTGGTGTGATCTTCATG.................................................. 291.000.00-1.00----------------------------------------------------
.................................................................................................................................................................................................................TTCTACCTCCCAGGTTCAGACG................... 221.000.00-1.00----------------------------------------------------
................................................................................................................................................................................................................................TCAAGCTATTCTCCTCGGC....... 191.000.00------------------------------------------------1.00-----
.............................................................................................................................................................................................................................GGTTCAAGCTATTCTCCTGCCTCAGCCTCAGGG 331.000.00------1.00-----------------------------------------------
....................................................................................................TTTTTTTTTTTTTTTACACTAAGT.............................................................................................................................. 241.000.00-----------------------------------------1.00------------
..............................................................................................................................................................................................................................GTTCAAGCTATTCTCCTA.......... 181.000.00------1.00-----------------------------------------------
........................................................................................................................................................................................................................AGAATAGCTTGAACCTGGGA.............. 2001.001.00---------1.00--------------------------------------------
...........................................................................................GGTGTTTTGTTTTTTTTTTTTTTTACA.................................................................................................................................... 271.000.00--------------1.00---------------------------------------
.............................................................................................................................................................CTCACTGTTGCCCAGGCTGGCCT...................................................................... 231.000.00-1.00----------------------------------------------------
.......................................................................................................................................TTTTTTTTTTTTTTGAGATAGTCTAG......................................................................................... 261.000.00--------1.00---------------------------------------------
...........................CTTGATCTGAGATGAG............................................................................................................................................................................................................... 1620.500.50----------------------------------------------------0.50-
.............................ACTTGATCTGAGATG.............................................................................................................................................................................................................. 1570.140.14-----------------------------------------------------0.14