ID: uc002uea.2_intron_13_0_chr2_169018353_r.5p
GENE: (4)
chr2:169020049-169020298-


(1)
AGO2.ip
(2)
B-CELL
(1)
BRAIN
(3)
BREAST
(13)
CELL-LINE
(1)
CERVIX
(3)
HEART
(1)
HELA
(1)
LIVER
(1)
OTHER
(3)
SKIN
(1)
XRN.ip

Sense strand
GAGGTTTTGGAAGGCTTAGACTATCTACACAGAAACGGTCAGATTCACAGGTATGACCTCTGCAGAGATGTTTAAATTCAGATGTTCATATCTTAAAGAGGTTTTGGAAGGCTTAGACTGTCTACACAGAAACGGTCAGATTCACAGGTGTGACCTCTGCAGAGATGTTTAAATTCAGATGTTCATATCTTCAGCCCTAGTTTGTAAAGAATGTTAAGGAAACACATGTTGCAGGCAGGTATTGACATTA
.........................................................((((((((((..((((......))))..((((((((.....((((((....)))))).((((((((....)))..)))))........)))))))).))))))))))......................................................................................
.........................................................58...........................................................................................................................183.................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR038861(GSM458544)
MM466. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040008(GSM532893)
G727N. (cervix)
TAX577742(Rovira)
total RNA. (breast)
..............................................................CAGAGATGTTTAAATTAGA.........................................................................................................................................................................1984.000.0030.004.0010.004.008.006.00-4.004.002.004.002.00---2.002.00--2.00---------
...............................................................................................................................................................CAGAGATGTTTAAATTAGAA.......................................................................2014.000.00-6.00----6.00------2.00---------------
..................................................................................................................................AACGGTCAGATTCACAGGGAT...................................................................................................216.000.00---6.00-------------------------
.......TGGAAGGCTTAGACTATCTACACAGAAACGGT...................................................................................................................................................................................................................3212.002.00------------2.00----------------
...............................................................AGAGATGTTTAAATTAGAA........................................................................................................................................................................192.000.00------------------2.00----------
................................................................................................................................GAAACGGTCAGATTCACAGGGAT...................................................................................................232.000.00---------2.00-------------------
.........GAAGGCTTAGACTATCT................................................................................................................................................................................................................................1711.001.00--------------------1.00--------
..........AAGGCTTAGACTATCTACACAGAAACG.....................................................................................................................................................................................................................2711.001.00------------------------1.00----
...GTTTTGGAAGGCTTAGA......................................................................................................................................................................................................................................1721.001.00--------------------------1.00--
.AGGTTTTGGAAGGCTTAGAC.....................................................................................................................................................................................................................................2021.001.00-----------------------1.00-----
..................................ACGGTCAGATTCACAG........................................................................................................................................................................................................1621.001.00-------------------------1.00---
...GTTTTGGAAGGCTTAGACTATCTACACA...........................................................................................................................................................................................................................2811.001.00----------------------1.00------
................................................................................................AGAGGTTTTGGAAGGCTTA.......................................................................................................................................1920.500.50-----------0.50-----------------
................................................................................................AGAGGTTTTGGAAGGCTTAGACT...................................................................................................................................2320.500.50----------------------------0.50
...............................................................................................AAGAGGTTTTGGAAGGCTTAG......................................................................................................................................2120.500.50--------------------0.50--------
............................................................................................TTAAAGAGGTTTTGGAAGGCT.........................................................................................................................................2120.500.50---------------------------0.50-

Antisense strand
GAGGTTTTGGAAGGCTTAGACTATCTACACAGAAACGGTCAGATTCACAGGTATGACCTCTGCAGAGATGTTTAAATTCAGATGTTCATATCTTAAAGAGGTTTTGGAAGGCTTAGACTGTCTACACAGAAACGGTCAGATTCACAGGTGTGACCTCTGCAGAGATGTTTAAATTCAGATGTTCATATCTTCAGCCCTAGTTTGTAAAGAATGTTAAGGAAACACATGTTGCAGGCAGGTATTGACATTA
.........................................................((((((((((..((((......))))..((((((((.....((((((....)))))).((((((((....)))..)))))........)))))))).))))))))))......................................................................................
.........................................................58...........................................................................................................................183.................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR038861(GSM458544)
MM466. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040008(GSM532893)
G727N. (cervix)
TAX577742(Rovira)
total RNA. (breast)
.......................................................................................................................................................................TTTAAATTCAGATGTTAAAA............................................................... 202.000.00---------------------2.00-------
................................................................................................................................GAAACGGTCAGATTCCAG........................................................................................................ 182.000.00--------------2.00--------------
.......................................................................................................................................................................TTTAAATTCAGATGTAAAA................................................................ 192.000.00-----------------2.00-----------
..............TGTGTAGATAGTCTAAG........................................................................................................................................................................................................................... 1720.500.50--------------------0.50--------