ID: uc002ubb.3_intron_11_0_chr2_160688298_r.3p
GENE: (27)
chr2:160688248-160688497-


(4)
B-CELL
(1)
BREAST
(4)
CELL-LINE
(1)
CERVIX
(2)
OTHER
(4)
SKIN

Sense strand
ACATCAAAACATTTGAAAACTCCTTAACCTATTAATTTTAGTACAATGGGATAATTTTATTTTACATATGTTTCTAATTGTCCAATATTGTTTATATTTTGAAGTATATTAAACTGAGAACTAAAATGTTTTAAACTTATCAAATAGAAGTGTACTAGATAAGTAATTGTTAAAATTATTGATTATTTTTTATTCAACAGATCCAAAATCACATATTCTGAGTATTCGAGATGAAAAGGAGAATAACTTT
..................................................................................................((((((((((((......(((((......)))))...((........)).)))))))..(((.(((((((.....))))))).)))........))))).....................................................
.................................................................................................98....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532876(GSM532876)
G547T. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
...............................................................................................................................................................................TTATTGATTATTTTTTTTTT.......................................................2039.000.0039.00----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATATTT.....................................................22731.710.2930.71------0.86--------0.14
...............................................................................................................................................................................TTATTGATTATTTTTTTGTT.......................................................207.000.007.00----------------
...............................................................................................................................................................................TTATTGATTATTTTTTACATT......................................................216.000.006.00----------------
..................................................................................................................................................................................................................................CGAGATGAAAAGGAGAATAA....2013.003.00--3.00--------------
...............................................................................................................................................................................TTATTGATTATTTTTTTTTA.......................................................202.000.002.00----------------
...............................................................................................................................................................................TTATTGATTATTTTTTGTTT.......................................................202.000.002.00----------------
...............................................................................................................................................................................TTATTGATTATTTTTTTTAT.......................................................202.000.002.00----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATAGTT.....................................................2271.290.291.29----------------
...............................................................................................................................................................................TTATTGATTATTTTTTTA.........................................................181.000.001.00----------------
......................................................................................................AGTATATTAAACTGATTT..................................................................................................................................181.000.00----------1.00------
........................................................................................................................................................................................................................TCTGAGTATTCGAGATGT................181.000.00---1.00-------------
...................................................................................................................................................................................................................................GAGATGAAAAGGAGAATAA....1911.001.00----1.00------------
.................................................................................................................................................................................................................................TCGAGATGAAAAGGAGAAT......1911.001.00--------1.00--------
................................................................................................................................................................................................................................TTCGAGATGAAAAGGAGAA.......1911.001.00----1.00------------
.....................................................ATTTTATTTTACATATGTTTATAT.............................................................................................................................................................................241.000.00---------------1.00-
..................................................................................................................................................................................................................................CGAGATGAAAAGGAGAATA.....1911.001.00---------1.00-------
............................................................................................................................................................................................TTTATTCAACAGATCGTA............................................181.000.00--------------1.00--
...............................................................................................................................................................................TTATTGATTATTTTTTAAAA.......................................................201.000.001.00----------------
...............................................................................................................................................................................TTATTGATTATTTTTTGTGT.......................................................201.000.001.00----------------
..................................................................................................................................................................................................................ACATATTCTGAGTATTCG......................1811.001.00------------1.00----
...............................................................................................................................................................................TTATTGATTATTTTTTACATA......................................................211.000.001.00----------------
..........................ACCTATTAATTTTAGGTAA.............................................................................................................................................................................................................191.000.00-----1.00-----------
..................................................................................................................................................................................................................................CGAGATGAAAAGGAGA........1611.001.00-----------1.00-----
...............................................................................................................................................................................TTATTGATTATTTTTTACATG......................................................211.000.001.00----------------
................................................................................................................................................................................TATTGATTATTTTTTATATTT.....................................................211.000.001.00----------------
..................................................................................................................................................................................................................................CGAGATGAAAAGGAGAA.......1711.001.00---1.00-------------
...............................................................................................................................................................................TTATTGATTATTTTTTATTCTT.....................................................221.000.001.00----------------
...............................................................................................................................................................................TTATTGATTATTTTTTGGTT.......................................................201.000.001.00----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATATGT.....................................................2270.860.290.86----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATTTTTA....................................................2350.800.400.80----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATATTA.....................................................2270.570.290.57----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATT........................................................1950.400.400.40----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATTTGT.....................................................2250.400.400.40----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATATG......................................................2170.290.290.29----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATAG.......................................................2070.290.290.29----------------
...............................................................................................................................................................................TTATTGATTATTTTTTAT.........................................................1870.290.290.14---------------0.14
...............................................................................................................................................................................TTATTGATTATTTTTTATAGT......................................................2170.290.290.29----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATTTG......................................................2150.200.400.20----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATTGTA.....................................................2250.200.400.20----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATTTA......................................................2150.200.40-------0.20---------
...............................................................................................................................................................................TTATTGATTATTTTTTATTTTA.....................................................2250.200.400.20----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATATAA.....................................................2270.140.290.14----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATATA......................................................2170.140.290.14----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATAGCT.....................................................2270.140.290.14----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATATAT.....................................................2270.140.290.14----------------
...............................................................................................................................................................................TTATTGATTATTTTTTATGTTT.....................................................2270.140.290.14----------------

Antisense strand
ACATCAAAACATTTGAAAACTCCTTAACCTATTAATTTTAGTACAATGGGATAATTTTATTTTACATATGTTTCTAATTGTCCAATATTGTTTATATTTTGAAGTATATTAAACTGAGAACTAAAATGTTTTAAACTTATCAAATAGAAGTGTACTAGATAAGTAATTGTTAAAATTATTGATTATTTTTTATTCAACAGATCCAAAATCACATATTCTGAGTATTCGAGATGAAAAGGAGAATAACTTT
..................................................................................................((((((((((((......(((((......)))))...((........)).)))))))..(((.(((((((.....))))))).)))........))))).....................................................
.................................................................................................98....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532876(GSM532876)
G547T. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
............................................................................................................................................................................AAATTATTGATTATTTTCGG.......................................................... 202.000.00-2.00---------------
............................................................................................................................................................................AAATTATTGATTATTTCGG........................................................... 192.000.00------2.00----------
.......................................................................................................................................................................................................................TTCTGAGTATTCGAGAG.................. 171.000.00-------------1.00---
..........................................................................................................................................................................................................................................AAAGGAGAATAACTTGAC 181.000.00-----1.00-----------
............................................................................................................................................................................AAATTATTGATTATTTTCG........................................................... 191.000.00-1.00---------------