uc002tyu.1_intron_0_0_chr2_155294363

TCTCTAATATGGTTTGCCTAAGCTTAACTACATCAATTCTTCTGAAAATATCCAAGAAATGTCACGGTGGATTATGGACTCTTTGTTAGATAATTCAATTGAACTATAATAATCTTTATTATTTTGTTCCTGGTGTGAATAATTTATTTACAACATTGATTATTAAGGTTTCATGAGGGTTTTTTTTTTTTTTTTTTTAGATGGAGTCTTGCTCTGTCGTCAGGCTGGAGTGCACTGGCGTAATCTGGGC .........................................................................................................................................(((((((.............)))))))...................................................................................... ........................................................................................................................................137............................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR037937(GSM510475) 293cand2. (cell line)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR189784	SRR324841(SRX087285) "Total RNA, no rRNA depletion". (cell line)	SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin)	SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line)	SRR189785	SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin)	SRR189786	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR040035(GSM532920) G001T. (cervix)	TAX577745(Rovira) total RNA. (breast)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCCC..................................................	25		19.00	0.00	18.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTC..................................................	25		14.00	0.00	13.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTAC.................................................	26		9.00	0.00	2.00	7.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTACC..................................................	25		8.00	0.00	5.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTATC.................................................	26		7.00	0.00	6.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTGC.................................................	26		6.00	0.00	2.00	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCATC.................................................	26		4.00	0.00	3.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGC.................................................	26		4.00	0.00	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCTAC................................................	27		4.00	0.00	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................TTTTTTTTTTTTAGATGGAGTGG.........................................	23		3.00	0.00	-	-	-	3.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCCCC................................................	27		3.00	0.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................................GATGGAGTCTTGCTCTGTCGAAA............................	23		3.00	0.00	-	-	3.00	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCAGG.................................................	26		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCGG..................................................	25		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTGCC.................................................	28		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCTTC................................................	27		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTACAGC...............................................	28		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGAG................................................	27		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCATT................................................	27		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCCCC.................................................	26		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTAAAG.................................................	26		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGCC................................................	27		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAT..................................................	25		2.00	0.00	1.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCGC..................................................	25		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCCAC................................................	27		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCAGG................................................	27		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGAC................................................	27		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTCCC........................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTCCGC......................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTAGT.......................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTA..................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTACT....................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................TTTTTTTTTTTTTTTAGATGCCAA...........................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTCTAC.......................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................ATTTATTTACAACATATG...........................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGGTC................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTGCCC...................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTGCT.................................................	28		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCATC................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTAGGA.................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTCCCC...................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTAGCT.....................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCAG..................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTAGTT..........................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTGCTG.................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................................CTTGCTCTGTCGTCAGGCTAAA.....................	22		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAACTT...............................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTATCT....................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCCAC.................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................GGTTTTTTTTTTTTTTTTTTTATCC................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTCCC...................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................................................ATGGAGTCTTGCTCTGTCGAAGA...........................	23		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTACTG.................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTCCTT...................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTGGGG...................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGCTC................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTGTG..........................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTAGT....................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................GGGTTTTTTTTTTTTTTTTTTTAGGCTG..............................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTACTTC...............................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTCTGC.....................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTCCCT.................................................	28		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTTTCC..................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTCTTG.....................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTTTTCT.................................................	29		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCGT..................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTCCTT.....................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTTTTTC.................................................	29		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTCAC....................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................................................GTCAGGCTGGAGTGCACCGG............	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................GGGTTTTTTTTTTTTTTTTTTTCATC................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCG...................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTCC..................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTGTTT......................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGGGG................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGGG................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCCTT.................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCAGA.................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................GAGGGTTTTTTTTTTTTACT........................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTCT......................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTAGTT................................................	29		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................GAGGGTTTTTTTTTTTTTTCCC......................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTCTTT......................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTCTC........................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTAGTC.................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................................................GCTCTGTCGTCAGGCTGGCGTG..................	22		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTTTTTTC................................................	30		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTAGGA..................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGTT.................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTCTT....................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGATT................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTATAA................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTAG.......................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTGAG......................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTAC.......................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGGGC................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTGC..................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................AGGCTGGAGTGCACTGCGCG.........	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTGAGG......................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTCTG......................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAAAGC...............................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................TTTATTATTTTGTTCCTTGA....................................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................GTTTTTTTTTTTTTTTTTTTAGACTG..............................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................TTTTTTTTTTTTAGATGCTGC...........................................	21		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTAATT.................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTGCTC.................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................................................TGCTCTGTCGTCAGGCTGGAGTGCCGTG.............	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTCC.................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................GGTTTTTTTTTTTTTTTTTTTAGATAAC.............................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTATT.................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................TTTTTTTTTTTTTTTTTTAGATGGAGGCC.........................................	29		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTACGG.....................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAGGAC...............................................	28	8	0.25	0.12	0.12	0.12	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................TTCATGAGGGTTTTTTTT...............................................................	18	4	0.25	0.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.25
...........................................................................................................................................................................CATGAGGGTTTTTTTTTTTTTTTT.......................................................	24	6	0.17	0.17	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAGTTG...............................................	28	8	0.12	0.12	0.12	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAG..................................................	25	8	0.12	0.12	0.12	-	-	-	-	-	-	-	-	-	-	-	-	-	-

TCTCTAATATGGTTTGCCTAAGCTTAACTACATCAATTCTTCTGAAAATATCCAAGAAATGTCACGGTGGATTATGGACTCTTTGTTAGATAATTCAATTGAACTATAATAATCTTTATTATTTTGTTCCTGGTGTGAATAATTTATTTACAACATTGATTATTAAGGTTTCATGAGGGTTTTTTTTTTTTTTTTTTTAGATGGAGTCTTGCTCTGTCGTCAGGCTGGAGTGCACTGGCGTAATCTGGGC
.........................................................................................................................................(((((((.............)))))))......................................................................................
........................................................................................................................................137............................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR037937(GSM510475)
293cand2. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR189784

SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR189785

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR189786

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR040035(GSM532920)
G001T. (cervix)

TAX577745(Rovira)
total RNA. (breast)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCCC..................................................

19.00

0.00

18.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTC..................................................

14.00

0.00

13.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTAC.................................................

9.00

0.00

2.00

7.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTACC..................................................

8.00

0.00

5.00

3.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTATC.................................................

7.00

0.00

6.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTGC.................................................

6.00

0.00

2.00

4.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCATC.................................................

4.00

0.00

3.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGC.................................................

4.00

0.00

4.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCTAC................................................

4.00

0.00

4.00

..........................................................................................................................................................................................TTTTTTTTTTTTAGATGGAGTGG.........................................

3.00

0.00

3.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCCCC................................................

3.00

0.00

3.00

.......................................................................................................................................................................................................GATGGAGTCTTGCTCTGTCGAAA............................

3.00

0.00

3.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCAGG.................................................

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCGG..................................................

2.00

0.00

2.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTGCC.................................................

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCTTC................................................

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTACAGC...............................................

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGAG................................................

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCATT................................................

2.00

0.00

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTAAAG.................................................

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGCC................................................

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAT..................................................

2.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCGC..................................................

2.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCCAC................................................

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCAGG................................................

2.00

0.00

2.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGAC................................................

2.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTCCC........................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTCCGC......................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTAGT.......................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTA..................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTACT....................................................

1.00

0.00

1.00

.......................................................................................................................................................................................TTTTTTTTTTTTTTTAGATGCCAA...........................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTCTAC.......................................................

1.00

0.00

1.00

.............................................................................................................................................ATTTATTTACAACATATG...........................................................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGGTC................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTGCCC...................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTGCT.................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCATC................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTAGGA.................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTCCCC...................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTAGCT.....................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCAG..................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTAGTT..........................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTGCTG.................................................

1.00

0.00

1.00

...............................................................................................................................................................................................................CTTGCTCTGTCGTCAGGCTAAA.....................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAACTT...............................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTATCT....................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCCAC.................................................

1.00

0.00

1.00

.................................................................................................................................................................................GGTTTTTTTTTTTTTTTTTTTATCC................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTCCC...................................................

1.00

0.00

1.00

........................................................................................................................................................................................................ATGGAGTCTTGCTCTGTCGAAGA...........................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTACTG.................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTCCTT...................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTGGGG...................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGCTC................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTGTG..........................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTAGT....................................................

1.00

0.00

1.00

................................................................................................................................................................................GGGTTTTTTTTTTTTTTTTTTTAGGCTG..............................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTACTTC...............................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTCTGC.....................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTCCCT.................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTTTCC..................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTCTTG.....................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTTTTCT.................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCGT..................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTCCTT.....................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTTTTTC.................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTCAC....................................................

1.00

0.00

1.00

..........................................................................................................................................................................................................................GTCAGGCTGGAGTGCACCGG............

1.00

0.00

1.00

................................................................................................................................................................................GGGTTTTTTTTTTTTTTTTTTTCATC................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCG...................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTCC..................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTGTTT......................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGGGG................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTCGGG................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCCTT.................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCAGA.................................................

1.00

0.00

1.00

..............................................................................................................................................................................GAGGGTTTTTTTTTTTTACT........................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTCT......................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTAGTT................................................

1.00

0.00

1.00

..............................................................................................................................................................................GAGGGTTTTTTTTTTTTTTCCC......................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTCTTT......................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTCTC........................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTAGTC.................................................

1.00

0.00

1.00

..................................................................................................................................................................................................................GCTCTGTCGTCAGGCTGGCGTG..................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTTTTTTTTTC................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTAGGA..................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGTT.................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTCTT....................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGATT................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTATAA................................................

1.00

0.00

1.00

............................................................................................................................................................................ATGAGGGTTTTTTTTTTTTTTAG.......................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTGAG......................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTAC.......................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTGGGC................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTTTTTTGC..................................................

1.00

0.00

1.00

.............................................................................................................................................................................................................................AGGCTGGAGTGCACTGCGCG.........

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTGAGG......................................................

1.00

0.00

1.00

.............................................................................................................................................................................TGAGGGTTTTTTTTTTTTTTCTG......................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAAAGC...............................................

1.00

0.00

1.00

..................................................................................................................TTTATTATTTTGTTCCTTGA....................................................................................................................

1.00

0.00

1.00

..................................................................................................................................................................................GTTTTTTTTTTTTTTTTTTTAGACTG..............................................

1.00

0.00

1.00

..........................................................................................................................................................................................TTTTTTTTTTTTAGATGCTGC...........................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTAATT.................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTGCTC.................................................

1.00

0.00

1.00

.................................................................................................................................................................................................................TGCTCTGTCGTCAGGCTGGAGTGCCGTG.............

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTCTCC.................................................

1.00

0.00

1.00

.................................................................................................................................................................................GGTTTTTTTTTTTTTTTTTTTAGATAAC.............................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTATT.................................................

1.00

0.00

1.00

....................................................................................................................................................................................TTTTTTTTTTTTTTTTTTAGATGGAGGCC.........................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTACGG.....................................................

1.00

0.00

1.00

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAGGAC...............................................

0.25

0.12

.........................................................................................................................................................................TTCATGAGGGTTTTTTTT...............................................................

0.25

...........................................................................................................................................................................CATGAGGGTTTTTTTTTTTTTTTT.......................................................

0.17

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAGTTG...............................................

0.12

...............................................................................................................................................................................AGGGTTTTTTTTTTTTTTTTTTTAG..................................................

0.12

TCTCTAATATGGTTTGCCTAAGCTTAACTACATCAATTCTTCTGAAAATATCCAAGAAATGTCACGGTGGATTATGGACTCTTTGTTAGATAATTCAATTGAACTATAATAATCTTTATTATTTTGTTCCTGGTGTGAATAATTTATTTACAACATTGATTATTAAGGTTTCATGAGGGTTTTTTTTTTTTTTTTTTTAGATGGAGTCTTGCTCTGTCGTCAGGCTGGAGTGCACTGGCGTAATCTGGGC .........................................................................................................................................(((((((.............)))))))...................................................................................... ........................................................................................................................................137............................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR037937(GSM510475) 293cand2. (cell line)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR189784	SRR324841(SRX087285) "Total RNA, no rRNA depletion". (cell line)	SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin)	SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line)	SRR189785	SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin)	SRR189786	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR040035(GSM532920) G001T. (cervix)	TAX577745(Rovira) total RNA. (breast)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................................................................................................GGGTTTTTTTTTTTTTTTTTTTGTTC................................................	26		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................................TCTGTCGTCAGGCTGAAA....................	18		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.........................................................................................................................................................................................................................................ACTGGCGTAATCTGGACCC	19		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................AGGCTGGAGTGCACTGGCGTCGGC.....	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................GGGTTTTTTTTTTTTTTTTTTGTTC.................................................	25		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................................TCTGTCGTCAGGCTGGAGTGCCG...............	23		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................................................ACTCCAGCCTGACGACAGAGCAAGACTCCA...................	30	9	0.11	0.11	0.11	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR037937(GSM510475)
293cand2. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR189784

SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR189785

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR189786

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR040035(GSM532920)
G001T. (cervix)

TAX577745(Rovira)
total RNA. (breast)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

................................................................................................................................................................................GGGTTTTTTTTTTTTTTTTTTTGTTC................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................TCTGTCGTCAGGCTGAAA....................

1.00

0.00

1.00

.........................................................................................................................................................................................................................................ACTGGCGTAATCTGGACCC

1.00

0.00

1.00

.............................................................................................................................................................................................................................AGGCTGGAGTGCACTGGCGTCGGC.....

1.00

0.00

1.00

................................................................................................................................................................................GGGTTTTTTTTTTTTTTTTTTGTTC.................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................TCTGTCGTCAGGCTGGAGTGCCG...............

1.00

0.00

1.00

.........................................................................................................................................................................................................ACTCCAGCCTGACGACAGAGCAAGACTCCA...................

0.11