ID: uc002twg.2_intron_10_0_chr2_148683731_f.3p
GENE: (11)
chr2:148684449-148684698+


(1)
BREAST
(8)
CELL-LINE
(2)
LIVER
(2)
OTHER
(7)
SKIN

Sense strand
TTGTGATAGTCTCATGCTTAAAAAAAAAGTTCTGTTTGTGCTTTTCTTTATGATTCTGCACATGGTAGTCAATAAAAGTGAATGTTGACAGAAACTTCTTTGACCCAGAAAAATAGCCATTTCTTCATGAAAATTTTATTGTTTCCTAATAGAAAACAAAAACTGCTGTGGCGTTTGAGTATATGTTTTTCTCCTTTTAGGGAATGGCAATGCTCTGTGAAACCATTGAAGAATGTTGGGATCACGACGC
.........................................................((...(((..(((((...((((...((....))...))))..)))))))).....(((((..((((.....))))......((((((.((...)).)))))).....))))).))..............................................................................
............................................45................................................................................................................................175.........................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR029128(GSM416757)
H520. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................TATGATTCTGCACATGGAATC.....................................................................................................................................................................................2138.000.0038.00-------------------
................................................TATGATTCTGCACATGGATC......................................................................................................................................................................................2021.000.0021.00-------------------
................................................TATGATTCTGCACATGGAACA.....................................................................................................................................................................................2110.000.00-10.00------------------
.......................................................................................................................................................................................................................................AATGTTGGGATCACGACGC1912.002.00------2.00-------------
................................................TATGATTCTGCACATGGAAC......................................................................................................................................................................................202.000.00-----2.00--------------
..................................................................................................................................................................CTGCTGTGGCGTTTGA........................................................................1612.002.00-------------1.001.00-----
..................................................................................................................................................................................................................................TGAAGAATGTTGGGATTAC.....191.000.00----1.00---------------
.................................................ATGATTCTGCACATGGAAC......................................................................................................................................................................................191.000.00---------1.00----------
..........................................................................................................................................................................................................AATGGCAATGCTCTGTGAAACCATT.......................2511.001.00--------1.00-----------
.......................................................................................................................................................GAAAACAAAAACTGCTGTGG...............................................................................2011.001.00-------1.00------------
...................................................................................GTTGACAGAAACTTCTTTGACCCAGAA............................................................................................................................................2711.001.00--------1.00-----------
...............................................................................................................................................................................................................................CATTGAAGAATGTTGGG..........1711.001.00---1.00----------------
................................................TATGATTCTGCACATGGA........................................................................................................................................................................................181.000.00--1.00-----------------
................CTTAAAAAAAAAGTTCTTGTG.....................................................................................................................................................................................................................211.000.00-----------1.00--------
................................TGTTTGTGCTTTTCTTTTTTA.....................................................................................................................................................................................................211.000.00----------------1.00---
................................................................................................................................................................................................................AATGCTCTGTGAAACCATTGAAGGATG...............271.000.00------------------1.00-
..............................................................................................................................................................................................................................CCATTGAAGAATGTTGGG..........1811.001.00---1.00----------------
................................................TATGATTCTGCACATGGAA.......................................................................................................................................................................................191.000.00--1.00-----------------
.....................................................................................................................................................................................................................................AGAATGTTGGGATCACGACGCAA231.000.00---------------1.00----
.................................................................................................................................................................................................................................TTGAAGAATGTTGGGATCACGAC..2311.001.00-----------------1.00--
..........................................................................................................................................................................................................AATGGCAATGCTCTGTGAAAC...........................2111.001.00-------1.00------------
......................................................................................................................................................................................ATGTTTTTCTCCTTTTGCA.................................................191.000.00----------1.00---------

Antisense strand
TTGTGATAGTCTCATGCTTAAAAAAAAAGTTCTGTTTGTGCTTTTCTTTATGATTCTGCACATGGTAGTCAATAAAAGTGAATGTTGACAGAAACTTCTTTGACCCAGAAAAATAGCCATTTCTTCATGAAAATTTTATTGTTTCCTAATAGAAAACAAAAACTGCTGTGGCGTTTGAGTATATGTTTTTCTCCTTTTAGGGAATGGCAATGCTCTGTGAAACCATTGAAGAATGTTGGGATCACGACGC
.........................................................((...(((..(((((...((((...((....))...))))..)))))))).....(((((..((((.....))))......((((((.((...)).)))))).....))))).))..............................................................................
............................................45................................................................................................................................175.........................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR029128(GSM416757)
H520. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................TATGATTCTGCACATGGT........................................................................................................................................................................................ 182.000.00--1.00---------1.00-------
................................................CCATGTGCAGAATCATA......................................................................................................................................................................................... 1711.001.00--1.00-----------------
...................................................................................................................................................AATAGAAAACAAAAACCGG.................................................................................... 191.000.00----1.00---------------
............................................................................................................................................................................GTTTGAGTATATGTTTATA........................................................... 191.000.00-------------------1.00
................................................TATGATTCTGCACATGTTTA...................................................................................................................................................................................... 200.200.00---------0.20----------
................................................CATGTGCAGAATCATA.......................................................................................................................................................................................... 1650.200.20--0.20-----------------