ID: uc002tts.1_intron_0_0_chr2_133683779_r.5p
GENE: NCKAP5(6)
chr2:133721093-133721342-


(1)
B-CELL 		(1)
BRAIN 		(3)
BREAST 		(9)
CELL-LINE 		(1)
HELA 		(1)
LIVER 		(2)
OTHER 		(3)
SKIN

Sense strand
AGGGAAAAGAAAAGACCAAATTGCTATTAGAGAGATTGAAAGCTCTAGAGGTAAGAAATGAAGCAATTTTTACACTCTTCAAGAAAAATAACAGTATTCTGCTTCTTTTATTGGCACTGGTTTTGAGTGAGTATAAATCTTCCCTTTTGAGTTCTCCCAGACTAATATGATCTACGATTTCCTGCTGAGATTTGTCTACAATGAGCAAAAAGTTAGCACTGAAAGGGTCTTGACCTAATGTTGTTTTAAA
......................................................................................................................................................((((....((((......(((((.((......))...))))).)))).....))))............................................
...............................................................................................................................128.............................................................................208........................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR343335SRR029130(GSM416759)
DLD2. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM359177(GSM359177)
hela_nucl_a. (hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.........................................................................................................................................................................................TGAGATTTGTCTACAAGCG..............................................1966.000.0042.0010.0011.00-3.00------------------
.........................................................................................................................................................................................TGAGATTTGTCTACAAGCGC.............................................2017.000.0014.00-2.00-1.00------------------
.........................................................................................................................................................................................TGAGATTTGTCTACAAGCA..............................................199.000.003.00-5.00-1.00------------------
..........................................................................................................................................................................................GAGATTTGTCTACAAGCG..............................................185.000.004.00-1.00--------------------
.........................................................................................................................................................................................TGAGATTTGTCTACAAGC...............................................182.000.001.00----------------1.00-----
..............................................................................................................................................................................CGATTTCCTGCTGAGATT..........................................................1811.001.00------------1.00----------
....................................................................................................................................ATAAATCTTCCCTTTGTGG...................................................................................................191.000.00---------1.00-------------
.............................GAGAGATTGAAAGCTCTAGAGGGAG....................................................................................................................................................................................................251.000.00-----------1.00-----------
..........................................................................................................................................................................................GAGATTTGTCTACAAGCA..............................................181.000.001.00----------------------
....................................................................................................................................................................ATATGATCTACGATTTCC....................................................................1811.001.00---------------1.00-------
.........................................................................................................................................................................................TGAGATTTGTCTACAAGCAC.............................................201.000.001.00----------------------
.........................................................................................................................................................................................TGAGATTTGTCTACACGCA..............................................191.000.001.00----------------------
..............................................AGAGGTAAGAAATGAAGCA.........................................................................................................................................................................................1911.001.00-------------------1.00---
.....................................GAAAGCTCTAGAGGTAAGAAATGAAG...........................................................................................................................................................................................2611.001.00--------------------1.00--
..............................................................................................................................................................................................................................AAGGGTCTTGACCTATACT.........191.000.00--------------1.00--------
.........................................................................................................................................................................................TGAGATTTGTCTACACGAG..............................................191.000.00--1.00--------------------
.....................................................................TTACACTCTTCAAGAAAAATAACAGT...........................................................................................................................................................2611.001.00----------1.00------------
.........................ATTAGAGAGATTGAAAG................................................................................................................................................................................................................1720.500.50---------------------0.50-
...............................................................CAATTTTTACACTCTT...........................................................................................................................................................................1650.200.20----------------------0.20

Antisense strand
AGGGAAAAGAAAAGACCAAATTGCTATTAGAGAGATTGAAAGCTCTAGAGGTAAGAAATGAAGCAATTTTTACACTCTTCAAGAAAAATAACAGTATTCTGCTTCTTTTATTGGCACTGGTTTTGAGTGAGTATAAATCTTCCCTTTTGAGTTCTCCCAGACTAATATGATCTACGATTTCCTGCTGAGATTTGTCTACAATGAGCAAAAAGTTAGCACTGAAAGGGTCTTGACCTAATGTTGTTTTAAA
......................................................................................................................................................((((....((((......(((((.((......))...))))).)))).....))))............................................
...............................................................................................................................128.............................................................................208........................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR343335SRR029130(GSM416759)
DLD2. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM359177(GSM359177)
hela_nucl_a. (hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.........................................................................................................................................................................................TGAGATTTGTCTACAAAGCA............................................. 2044.000.005.0020.002.008.002.00-4.003.00---------------
.........................................................................................................................................................................................TGAGATTTGTCTACAAAGC.............................................. 199.000.00-4.003.00-1.00--1.00---------------
.........................................................................................................................................................................................TGAGATTTGTCTACAAGCA.............................................. 197.000.00-5.00----1.001.00---------------
.........................................................................................................................................................................................TGAGATTTGTCTACAATAGCA............................................ 216.000.00-----6.00-----------------
...................................................................................................TGCTTCTTTTATTGGCTC..................................................................................................................................... 183.000.00--------3.00--------------
....................................................................................................................................................................................CCTGCTGAGATTTGTTG..................................................... 171.000.00----------------1.00------
........................................................................................................................................................................................CTGAGATTTGTCTACAAGCA.............................................. 201.000.00-----1.00-----------------
.........................................................................................................................................................................................TGAGATTTGTCTACAAAG............................................... 181.000.00------1.00----------------
..............................................................................................................................................................................CGATTTCCTGCTGAGAT........................................................... 171.000.00-------------1.00---------
...................................................TAAGAAATGAAGCAATAC..................................................................................................................................................................................... 181.000.00---------1.00-------------
...................................................................................................................................................TGAGTTCTCCCAGACTG...................................................................................... 171.000.00------------------1.00----