| (2) BRAIN | (1) BREAST | (22) CELL-LINE | (2) CERVIX | (1) HEART | (1) LIVER | (2) OTHER | (1) SKIN |
| TCCAAATCCCATTCAGATTCAGTTCTTCACTGACAATGAGGCTCTGGGAGGAGAGCCCGATGGCCAGGCAGGCAGCGTGCAGGGCTCCTCCTGGTGCTTCAGCCAGTCCTGGGGCTGCCACTTCCCAGAGCACTGCCGGGTGTGCAGGCCGTGGGTGCAGCACCAGCTGCCTCAGGCTCATGCCCACTGTTCTGTTGCAGGCACCAACCCCTTCCTCAGGTCGGTGCACCACTGCGTGACCTCCAGGCAG ......................................................................((((((...(((((((....((((....))))..)))))))..))))))....((((..((.((((.......))))))..))))............................................................................................... ....................................................................69.............................................................................................164.................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037937(GSM510475) 293cand2. (cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR029125(GSM416754) U2OS. (cell line) | SRR029127(GSM416756) A549. (cell line) | SRR029131(GSM416760) MCF7. (cell line) | SRR029129(GSM416758) SW480. (cell line) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR029128(GSM416757) H520. (cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR189782 | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR189787 | SRR037938(GSM510476) 293Red. (cell line) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR037936(GSM510474) 293cand1. (cell line) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR191624(GSM715734) 31genomic small RNA (size selected RNA from t. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR040029(GSM532914) G026T. (cervix) | GSM450597(GSM450597) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040035(GSM532920) G001T. (cervix) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................AGCGTGCAGGGCTCCAAA............................................................................................................................................................... | 18 | 233.00 | 0.00 | 162.00 | 10.00 | 5.00 | 8.00 | 4.00 | 7.00 | 5.00 | 2.00 | 5.00 | 5.00 | - | 4.00 | 4.00 | 2.00 | - | 2.00 | 3.00 | 1.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCACA............................................................................................................................................................... | 18 | 18.00 | 0.00 | 14.00 | 1.00 | - | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCAAC............................................................................................................................................................... | 18 | 14.00 | 0.00 | 8.00 | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCCAA............................................................................................................................................................... | 18 | 13.00 | 0.00 | 7.00 | - | 1.00 | - | 3.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCAAT............................................................................................................................................................... | 18 | 10.00 | 0.00 | 7.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCCCA............................................................................................................................................................... | 18 | 5.00 | 0.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCGAA............................................................................................................................................................... | 18 | 5.00 | 0.00 | 1.00 | - | - | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCAAG............................................................................................................................................................... | 18 | 4.00 | 0.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCTAA............................................................................................................................................................... | 18 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCAGA............................................................................................................................................................... | 18 | 3.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCCCC............................................................................................................................................................... | 18 | 2.00 | 0.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCCAC............................................................................................................................................................... | 18 | 2.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCTAT............................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCGAC............................................................................................................................................................... | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCACT............................................................................................................................................................... | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCTCA............................................................................................................................................................... | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................CAGCGTGCAGGGCTCCAAT............................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ........................................................................CAGCGTGCAGGGCTCCAAA............................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................GTGCAGGCCGTGGGTATGA.......................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCCAT............................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................AGCGTGCAGGGCTCCCCG............................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................ATGAGGCTCTGGGAGGAGAGC.................................................................................................................................................................................................. | 21 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - |
| .............................................................................................................................................GTGCAGGCCGTGGGTG............................................................................................. | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |
| TCCAAATCCCATTCAGATTCAGTTCTTCACTGACAATGAGGCTCTGGGAGGAGAGCCCGATGGCCAGGCAGGCAGCGTGCAGGGCTCCTCCTGGTGCTTCAGCCAGTCCTGGGGCTGCCACTTCCCAGAGCACTGCCGGGTGTGCAGGCCGTGGGTGCAGCACCAGCTGCCTCAGGCTCATGCCCACTGTTCTGTTGCAGGCACCAACCCCTTCCTCAGGTCGGTGCACCACTGCGTGACCTCCAGGCAG ......................................................................((((((...(((((((....((((....))))..)))))))..))))))....((((..((.((((.......))))))..))))............................................................................................... ....................................................................69.............................................................................................164.................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037937(GSM510475) 293cand2. (cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR029125(GSM416754) U2OS. (cell line) | SRR029127(GSM416756) A549. (cell line) | SRR029131(GSM416760) MCF7. (cell line) | SRR029129(GSM416758) SW480. (cell line) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR029128(GSM416757) H520. (cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR189782 | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR189787 | SRR037938(GSM510476) 293Red. (cell line) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR037936(GSM510474) 293cand1. (cell line) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR191624(GSM715734) 31genomic small RNA (size selected RNA from t. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR040029(GSM532914) G026T. (cervix) | GSM450597(GSM450597) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040035(GSM532920) G001T. (cervix) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................GTGCAGGGCTCCTCCTCCCT.......................................................................................................................................................... | 20 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................GCACCAGCTGCCTCAAGAT........................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................CAGCACCAGCTGCCTCATA.......................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................ATGGCCAGGCAGGCAGCTTCG.......................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................AATGAGGCTCTGGGAAGTG..................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................GCAGGCACCAACCCCTTC.................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................ACCAACCCCTTCCTCAACAG............................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................GCACCAACCCCTTCCTCAGGG............................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................CCAGAGCACTGCCGGCTA............................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................GCCTGCAACAGAACAGTGGGC................................................ | 21 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| .....................................................................................................................................................................................GCAACAGAACAGTGGGC.................................................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - |
| ......................................................................................................................................................................................................TGAGGAAGGGGTTGGTGCCT................................ | 20 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - |
| .........................................................................................................................................................................................................TGAGGAAGGGGTTGGTG................................ | 17 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - |
| ......................................................................................................................................................................................................AGGAAGGGGTTGGTGCCT.................................. | 18 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - |