ID: uc002tsw.3_intron_1_0_chr2_132249598_r
GENE: (1)
chr2:132249548-132249829-


(5)
AGO2.ip
(1)
AGO3.ip
(10)
B-CELL
(4)
BRAIN
(15)
BREAST
(28)
CELL-LINE
(11)
CERVIX
(5)
HEART
(5)
HELA
(1)
KIDNEY
(7)
LIVER
(2)
OTHER
(41)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
TACGAGCTGGCTCAGGCGGCGGGCGGCGGTATCGACCCCGACGTGTTCAAGTGAGCGGGGCGGGTGGGGGCCGCATGCTCGCCAGACACCCCCGACCTCTGCTCTCCGGGTACGCCCGGCCCGCTGGTCGGGAGGAGCCCCCGCTGCCCCCGCCCCCGTCCTTGTCCGGTCTTCAGGGAGGTGGCCGCGCCGGGCGGAGAGGGCTCACCGGCCCCGCGTCTGTCCCCGCCAGGATCCTGGTGGACCTGCTGAAGCTGAACGTGGCCCCCCTCGCCGTCTTCC
................................................................................................................................................................................((.((.(((.((((.((((((.((....)).))).))).))))..))).)).))....................................................
............................................................................................................................................................................173........................................................232................................................
SizePerfect hitTotal NormPerfect NormSRR189786RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR343335SRR343337SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343336SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189787SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029129(GSM416758)
SW480. (cell line)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR029128(GSM416757)
H520. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR040039(GSM532924)
G531T. (cervix)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
GSM532871(GSM532871)
G652N. (cervix)
SRR191569(GSM715679)
54genomic small RNA (size selected RNA from t. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038856(GSM458539)
D11. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM532876(GSM532876)
G547T. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191483(GSM715593)
11genomic small RNA (size selected RNA from t. (breast)
TAX577742(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191479(GSM715589)
31genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191513(GSM715623)
164genomic small RNA (size selected RNA from . (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM956925PAZD5SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................................................................................................................................................CCCCCCTCGCCGTCTCC.1729.000.00--10.007.007.00-5.00--------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAGT................................................................................2528.001.001.00---------2.00--2.00---------1.00-----1.00------------------------------------------------1.00--------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAGC................................................................................2527.001.007.00--------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................GCTGAAGCTGAACGTGGCCCCCCTATC........275.000.00-------5.00-------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CACCGGCCCCGCGTCCTCC..........................................................1934.670.67--------3.33-------------------------------------0.67---------------------------------------------------------------------------------0.330.33-----------
...............................................................................................................................................................................................................................................GTGGACCTGCTGAAGCTGCTGG.....................224.000.00-------------------2.00------2.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CCCCCGCCCCCGTCCGC.......................................................................................................................174.000.00-----------------------------------1.00-------1.00-----1.00------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................TGGACCTGCTGAAGCTGA........................1823.503.50----------------------0.50---------------------1.000.50---------------------------------------------------0.50------0.50--------------0.50---------------------
..................................................................................................................................................................TGTCCGGTCTTCAGG.........................................................................................................1513.003.00------------1.00--1.00-------------------------1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................TGGTGGACCTGCTGAAGCTGA........................2123.003.00-0.50-------1.00--------------1.00--------------0.50-----------------------------------------------------------------------------------------------------
..................................................................................................................................................CCCCCGCCCCCGTCCGCCC.....................................................................................................................193.000.00-------------------------------1.00---------------------1.00---------------1.00-----------------------------------------------------------------------
..................................................................................................................................................CCCCCGCCCCCGTCCGCC......................................................................................................................183.000.00------------------------------------------------1.00--1.00-----1.00-----------------------------------------------------------------------------------
............................................................................................................................................................................................................................................CTGGTGGACCTGCTGAAGC...........................1922.502.50------------------------0.50------0.50------------------0.50--------------------------0.50-------------------------------0.50-------------------------------
.............................................................................................................................................................................................................................................TGGTGGACCTGCTGAAGC...........................1832.332.33-----------------0.33------------------------0.330.330.33-0.33--------------------------------------------------------------------------------0.33---0.33---------
............................................................................................................................................CCGCTGCCCCCGCCCCCGTCCTTGTCCGGTCTTCAGGGAGGTGGCCGCGCCGGGCGGAGAGG................................................................................6212.002.00----------------------------2.00----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ACCGGCCCCGCGTCTGTCCCCGCCAGTC................................................282.000.002.00--------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................GGTGGACCTGCTGAAGCTGA........................2022.002.00---------1.50-------------------------------------------------------------------------------------------0.50---------------------------------------
...............................TCGACCCCGACGTGTTCAAGA......................................................................................................................................................................................................................................212.000.00--------------------2.00------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGCTGAACGTGG..................3122.002.00-2.00-------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................TGGACCTGCTGAAGCTGAACGTGGC.................2521.501.50-0.50------------------------------------------------------------------------------------------------------------0.50-----------0.50------------------
...........................................................................................................................................................................................................................................CCTGGTGGACCTGCTGAAGCT..........................2121.501.50---------1.50-----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CCTGGTGGACCTGCTGAAGCTGA........................2321.501.50----------------------------------------1.50----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TCCTGGTGGACCTGCTGAAGCTGAAC......................2621.501.50--------------1.00--------------------------------------------------------------------0.50---------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAG...................................................................................2221.501.50-----------------------1.00------------------------------------------0.50--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................GTGGACCTGCTGAAGCTGAACG.....................2221.501.50---------------0.50-----------------------------------------------------------------1.00-----------------------------------------------------------
...................................................TGAGCGGGGCGGGTGGGAAA...................................................................................................................................................................................................................201.000.00------------1.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................GTGGACCTGCTGAAGGATC........................191.000.00------------------------------------------------------------------------1.00--------------------------------------------------------------------
...........................................................................................................................................................................................CGCCGGGCGGAGAGGGC..............................................................................1721.001.00---------------------------------------------0.50------------------------------------------------------------------------------0.50----------------
..................................................................................................................................................................................................................................................GACCTGCTGAAGCTGAACGTGGC.................2321.001.00----------------------------------------------------------------------------0.50----------------------------------0.50-----------------------------
...........................................................................................................................................................................................................................................................AAGCTGAACGTGGCCCCCCTCGCCGTCCCCC311.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGC...........................2221.001.00--------------------------------1.00------------------------------------------------------------------------------------------------------------
................CGGCGGGCGGCGGTACGGG.......................................................................................................................................................................................................................................................191.000.00-------------------------------------------------------------1.00-------------------------------------------------------------------------------
............................GTATCGACCCCGACGTGTTCAAGAT.....................................................................................................................................................................................................................................251.000.00-------------------------------------------------------------------1.00-------------------------------------------------------------------------
.....................................................AGCGGGGCGGGTGGGGGAGC.................................................................................................................................................................................................................201.000.00-------------------------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................CCCCCCTCGCCGTCTA..161.000.00--1.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................CCCCCCTCGCCGTCTC..161.000.00--1.00------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAGA................................................................................2521.001.00--------1.00------------------------------------------------------------------------------------------------------------------------------------
.............AGGCGGCGGGCGGCGGAA...........................................................................................................................................................................................................................................................181.000.00--------------------------------------1.00------------------------------------------------------------------------------------------------------
..CGAGCTGGCTCAGGCGGCGGGCGGCG..............................................................................................................................................................................................................................................................2611.001.00---------------------------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGATAGC................................................................................251.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAG.................................................................................2421.001.00----------------------------------------------------------------------------------------------0.50-----------------------0.50----------------------
.............................................................................................................................................................................................................CACCGGCCCCGCGTCCTC...........................................................1831.000.67--------0.33-----------------------------------------------------------------------------------------------------------------------------0.33-0.33----
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAGCTC..............................................................................2721.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAGTAA..............................................................................2721.001.00----------------------------------------------------------------1.00----------------------------------------------------------------------------
..........................................................................................CCCGACCTCTGCTCTGTCA.............................................................................................................................................................................191.000.00------------------------------1.00--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................GTGGACCTGCTGAAGCTGAAC......................2121.001.00-----------------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GCCCCGCGTCTGTCCCCGCCAGA.................................................231.000.00------------1.00--------------------------------------------------------------------------------------------------------------------------------
.ACGAGCTGGCTCAGGCGGCGGGCGGCGGC............................................................................................................................................................................................................................................................291.000.00-------------------------1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................TGCTGAAGCTGAACGTGGCAA...............211.000.00----------------------1.00----------------------------------------------------------------------------------------------------------------------
.............AGGCGGCGGGCGGCGGAGG..........................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------1.00-----------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAGTCT..............................................................................2721.001.00----------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................GGTGGACCTGCTGAAGCTGAA.......................2121.001.00----------------------------------------------------0.50--------------------------------0.50-------------------------------------------------------
.............AGGCGGCGGGCGGCGGAGGG.........................................................................................................................................................................................................................................................201.000.00----------------------------------------------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGCTGAACGTGGCCC...............3421.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................TGCTGAAGCTGAACGTGGCCCCCC............2421.001.00----------------------------------------------------------------------------0.50----------------------------------------0.50-----------------------
........................................................................................................................CCGCTGGTCGGGAGGAGCCCC.............................................................................................................................................2121.001.00-------------------------------------0.50-----------------------------------------------------------------0.50-------------------------------------
...........................................................................................................................................................................................................................................CCTGGTGGACCTGCTGAAGCTGAACGTGGC.................3021.001.00-0.50---------------------------------0.50---------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CCCCGCGTCTGTCCCCGGC....................................................191.000.00------------------------------------------------------------1.00--------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................TGGTGGACCTGCTGACGC...........................181.000.00-------------------------------------------------------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................AAGCTGAACGTGGCCCCCCTCGCCGTCCTCC311.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................GGACCTGCTGAAGCTGAACGTGGCCA...............261.000.00-----------1.00---------------------------------------------------------------------------------------------------------------------------------
..............GGCGGCGGGCGGCGGTGGGG........................................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------------1.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................................GGACCTGCTGAAGCTGAACGTGGCCC...............2621.001.00-----------1.00---------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGA..................................................................................2321.001.00---------------0.50----------------------0.50------------------------------------------------------------------------------------------------------
................................................................................................................CGCCCGGCCCGCTGGGGC........................................................................................................................................................181.000.00--------------------------------------------------------------------------1.00------------------------------------------------------------------
.................................................................................................................................................................................................................................................GGACCTGCTGAAGCTGAACGTGGTCC...............261.000.00-----------1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GTGGCCGCGCCGGGCTG.....................................................................................171.000.00------------------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGCGT................................................................................2521.001.50-----------------------------1.00---------------------------------------------------------------------------------------------------------------
...................................................TGAGCGGGGCGGGTGGAA.....................................................................................................................................................................................................................181.000.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGCTGAAC......................2721.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................AAGCTGAACGTGGCCCTCG............191.000.00--------------------------------------------------------------------1.00------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAGCTT..............................................................................2721.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCGGGGCGGGTGGGGGCCGT................................................................................................................................................................................................................241.000.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
..CGAGCTGGCTCAGGCCG.......................................................................................................................................................................................................................................................................171.000.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................ACCCCGACGTGTTCAAGATC....................................................................................................................................................................................................................................201.000.00----------------------------------1.00----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ACCGGCCCCGCGTCTTCCC.........................................................191.000.00------------------------------------------------------------------------------------1.00--------------------------------------------------------
....AGCTGGCTCAGGCGGCGGGCGGCG..............................................................................................................................................................................................................................................................2411.001.00------------------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................TGAGCGGGGCGGGTGGGGGTTT.................................................................................................................................................................................................................221.000.00-------------------------------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................................................TGGTGGACCTGCTGAAGCTGAA.......................2221.001.00------------------------0.50-------------------------------------------------------------------------------------------0.50------------------------
...........................................................................................................................................................................................................................................CCTGGTGGACCTGCTGAAG............................1921.001.00--------------------------------------------------------------------------------------------0.500.50-----------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAGCT...............................................................................2621.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................GAGGTGGCCGCGCCGGGCGGAGAGTTCT.............................................................................2821.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................GGTGGACCTGCTGAAGC...........................1730.670.67--------------------------------------------------------------------------------------0.33----------------------------------------------0.33-------
.............................................................................................................................................................................................................CACCGGCCCCGCGTC..............................................................1530.670.67-----------------------------------------0.33----------------------------------------------------------------------------------------0.33----------
.............................................................................................................................................................................................................CACCGGCCCCGCGTCC.............................................................1630.670.67-------------------------------0.33-------------------------------------------------------------------------------------------------------0.33-----
...........................................................................................................................................................................................................................................CCTGGTGGACCTGCTGAAGCTG.........................2220.500.50-------------------------------------------------------------------------------0.50-------------------------------------------------------------
............................................................................................................................................................................................................................................CTGGTGGACCTGCTGAAGCTGAACGTGGC.................2920.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CCTGGTGGACCTGCTGAAGCTGAACGT....................2720.500.50--------------0.50------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................TGGACCTGCTGAAGCTGAACG.....................2120.500.50-----------------0.50---------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................TGCTGAAGCTGAACGTGGCCCCC.............2320.500.50------------------------------------------------------------------------------------------------------------------------------0.50--------------
.............................................................................................................................................CGCTGCCCCCGCCCCCGTC..........................................................................................................................1920.500.50-----------------------------------------------------------------------------------------0.50---------------------------------------------------
......................................................................................................................................................................................................................................................TGCTGAAGCTGAACGTGGCCCCCCTCGCCG......3020.500.50---------------------------------------------------------------------------------------------------0.50-----------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGCTGAACGTGGC.................3220.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................CGCTGGTCGGGAGGAGCCCCCGC..........................................................................................................................................2320.500.50----------------0.50----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................CTGCTGAAGCTGAACGTGGC.................2020.500.50------------------------------------------------------------------------------------------------------0.50--------------------------------------
.....................................................................................................................................................................................................................................................CTGCTGAAGCTGAACGTGGCCCC..............2320.500.50------------------------------------------------------------------------------------------------0.50--------------------------------------------
...........................................................................................................................................................................................................................................................AAGCTGAACGTGGCCCCCCTCGCCG......2520.500.50-------------------------------------------------------------------------------------------------------------------0.50-------------------------
......................................................................................................................................................................................................................................................TGCTGAAGCTGAACGTGGCCCCCCTC..........2620.500.50--------------0.50------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................GGCCCCCCTCGCCGTCTT..1820.500.50--------------------------------------------------------------------------------------0.50------------------------------------------------------
.......................................................................................................................................................................................................................................................GCTGAAGCTGAACGTGGCCCCCC............2320.500.50---------------------------------0.50-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................AGGTGGCCGCGCCGGGCGGAGAGGGCTC............................................................................2820.500.50-----0.50---------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................ACCTGCTGAAGCTGAACGTGGCCC...............2420.500.50------------------------------------0.50--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGCTGAACG.....................2820.500.50-----------------------------------------------------------------------------0.50---------------------------------------------------------------
..................................................................................................................................................................................................................................................GACCTGCTGAAGCTGAACGTGGCCCCCCTCGCC.......3320.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................AGGATCCTGGTGGACCTGCTGAAGCTGA........................2820.500.50----------------------------------------------------------------------------------------------------------------0.50----------------------------
...............................................................................................................................................................................................................................................GTGGACCTGCTGAAGCTGAACGTGGCCCCC.............3020.500.50--------------------------------------------------0.50------------------------------------------------------------------------------------------
..................................................................................................................................................................................................CGGAGAGGGCTCACCGGC......................................................................1820.500.50---------------------------------------------------------------------------------------0.50-----------------------------------------------------
..........................................................................................................................................................................................................................................TCCTGGTGGACCTGCTGAAGCT..........................2220.500.50----------------0.50----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................CTGGTGGACCTGCTGAAGCTGAACGTGGCCC...............3120.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................CTGGTGGACCTGCTGAAGCTGA........................2220.500.50-------------------------------------------------------------------------------------------------------------------------0.50-------------------
...............................................................................................................................................................................................................................................GTGGACCTGCTGAAGCTGAACGTGGC.................2620.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................CTGGTGGACCTGCTGAAGCTGAACGTGG..................2820.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................AAGCTGAACGTGGCCCCCCTCGCC.......2420.500.50---------0.50-----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................TGGACCTGCTGAAGCTG.........................1720.500.50-------------------------------------------------------------------------------------------0.50-------------------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGCTGAACGTG...................3020.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................TGAAGCTGAACGTGGCCCCCCTCGCCGT.....2820.500.50--------------0.50------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................GACCTGCTGAAGCTGAACGTGGCC................2420.500.50------------------0.50--------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GCCGCGCCGGGCGGAGAGGGCT.............................................................................2220.500.50-----------------------------------------------------------------------------------------------------------------0.50---------------------------
......................................................................................................................GCCCGCTGGTCGGGAGGAGCCC..............................................................................................................................................2220.500.50-----------------------------------------------------------------------------------------------------------0.50---------------------------------
...........................................................................................................................................................................................................................................CCTGGTGGACCTGCTGAAGCTGAACG.....................2620.500.50------------------0.50--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................CTGCTGAAGCTGAACGTG...................1820.500.50------------------------------------------------------0.50--------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................TGGTGGACCTGCTGAAGCTGAAC......................2320.500.50-----------------------------------------------------------------------------------0.50---------------------------------------------------------
.....................................................................................................................................................................................................................................................CTGCTGAAGCTGAACGTGGCCCCCCTCGCCGT.....3220.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................TGCTGAAGCTGAACGT....................1620.500.50---------------------------------0.50-----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GATCCTGGTGGACCTGCTGAAGCTGAACGTGGC.................3320.500.50------------------------------------------0.50--------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGCTGA........................2520.500.50----------------------------------------------------------------------------------------------------0.50----------------------------------------
................................................................................................................................................................................................................................................TGGACCTGCTGAAGCTGAACGTGG..................2420.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CCTGGTGGACCTGCTGAAGC...........................2020.500.50----------------0.50----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................GGACCTGCTGAAGCTGAACGT....................2120.500.50---------------------------------------------------------------------------------------------------------0.50-----------------------------------
......................................................................................................................................................................................................................................................TGCTGAAGCTGAACGTGGCCCCCCTCGC........2820.500.50--------------0.50------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................TGGACCTGCTGAAGCTGAA.......................1920.500.50----------------------0.50----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................TGGACCTGCTGAAGCTGAACGTGGCC................2620.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................TGCTGAAGCTGAACGTGGCC................2020.500.50--------------------------------0.50------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................TGAAGCTGAACGTGGCCCC..............1920.500.50------------------------------------------------------------------------------------------------------------------------0.50--------------------
.......................................................................................................................................................................................................................................................GCTGAAGCTGAACGTGGCCCCC.............2220.500.50-----------0.50---------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................GTGGACCTGCTGAAGCTGAACGT....................2320.500.50---------------------------------0.50-----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................GGACCTGCTGAAGCTGAACGTGGCCCCCCT...........3020.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................TGAAGCTGAACGTGGCCC...............1820.500.50-----------------------------------------------------------------------------------------------0.50---------------------------------------------
...................................................TGAGCGGGGCGGGTGGGGGCCGC................................................................................................................................................................................................................2320.500.50-----0.50---------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................TGGTGGACCTGCTGAAGCTGAACGTGGCC................2920.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................GCGGAGAGGGCTCACCGGC......................................................................1920.500.50----------------------------------------------------------------------------------------------------------0.50----------------------------------
................................................................................................................................................................................................................................................TGGACCTGCTGAAGCTGAACGTGGCCC...............2720.500.50------------------------------------------------------------------------------------------------------------------0.50--------------------------
..............................................................................................................................................................................................................................................GGTGGACCTGCTGAAGCTGAACGTGGCC................2820.500.50------------------------------------------------------------------------------------------0.50--------------------------------------------------
........................................................................................................................................................................................................................................GATCCTGGTGGACCTGCTGAAGC...........................2320.500.50------------------------------------------0.50--------------------------------------------------------------------------------------------------
...................................................TGAGCGGGGCGGGTGGGGGC...................................................................................................................................................................................................................2020.500.50------------------------------------------------------------------------------------------------------------0.50--------------------------------
..............................................................................................................................................................................................................................................GGTGGACCTGCTGAAGCTGAACGTGGC.................2720.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGCTG.........................2420.500.50-------------------------------------------------------------------------------0.50-------------------------------------------------------------
..................................................................................................................................................................................................................................................GACCTGCTGAAGCTGAACGTGGCCC...............2520.500.50------------------------------------------------------0.50--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CCTGCTGAAGCTGAACGTGGCCCCCCTCGC........3020.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................AACGTGGCCCCCCTCGCCGTCTT..2320.500.50----------------------------------------------------0.50----------------------------------------------------------------------------------------
................................CGACCCCGACGTGTTC..........................................................................................................................................................................................................................................1620.500.50----------------------------------0.50----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................GCTGAAGCTGAACGTGGC.................1820.500.50---------------------------------------------------------------------------------------------------------------------------0.50-----------------
.............................................................................................................................................................................................................................................TGGTGGACCTGCTGAAGCTGAACGT....................2520.500.50-----------------0.50---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ATCCTGGTGGACCTGCTGAAGCT..........................2320.500.50--------------------------------------------------------------------------------------------------0.50------------------------------------------
.............................................................................................................................................................................................................CACCGGCCCCGCGTCATCC..........................................................1930.330.67------------------------------------------------------------------------------------------------------------------------------------0.33--------
.............................................................................................................................................................................................CCGGGCGGAGAGGGC..............................................................................1590.330.33----------------------------------------------------------------------------------------0.11--------------------------------------0.11------------0.11
......................................................................................................................................................................................................................................AGGATCCTGGTGGACC....................................1640.250.25---------------------------------------------0.25-----------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................TGGTGGACCTGCTGAA.............................1640.250.25-----------------------------------------------------------------------------------------------------------------------------------------0.25---
...............GCGGCGGGCGGCGGTCGGG........................................................................................................................................................................................................................................................1950.200.20-------------------------------------------------------------------------------------0.20-------------------------------------------------------
...............GCGGCGGGCGGCGGTCGG.........................................................................................................................................................................................................................................................1850.200.20-0.20-------------------------------------------------------------------------------------------------------------------------------------------
...............GCGGCGGGCGGCGGTCGCC........................................................................................................................................................................................................................................................1950.200.20-------------------------------------------------------------------------------------0.20-------------------------------------------------------
...............GCGGCGGGCGGCGGT............................................................................................................................................................................................................................................................1550.200.20------------------------------------------------------------------------------------------------------------------------------------------0.20--
.......................................................................................................................................AGCCCCCGCTGCCCCC...................................................................................................................................1690.110.11----------------0.11----------------------------------------------------------------------------------------------------------------------------

Antisense strand
TACGAGCTGGCTCAGGCGGCGGGCGGCGGTATCGACCCCGACGTGTTCAAGTGAGCGGGGCGGGTGGGGGCCGCATGCTCGCCAGACACCCCCGACCTCTGCTCTCCGGGTACGCCCGGCCCGCTGGTCGGGAGGAGCCCCCGCTGCCCCCGCCCCCGTCCTTGTCCGGTCTTCAGGGAGGTGGCCGCGCCGGGCGGAGAGGGCTCACCGGCCCCGCGTCTGTCCCCGCCAGGATCCTGGTGGACCTGCTGAAGCTGAACGTGGCCCCCCTCGCCGTCTTCC
................................................................................................................................................................................((.((.(((.((((.((((((.((....)).))).))).))))..))).)).))....................................................
............................................................................................................................................................................173........................................................232................................................
SizePerfect hitTotal NormPerfect NormSRR189786RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR343335SRR343337SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343336SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189787SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029129(GSM416758)
SW480. (cell line)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR029128(GSM416757)
H520. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR040039(GSM532924)
G531T. (cervix)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
GSM532871(GSM532871)
G652N. (cervix)
SRR191569(GSM715679)
54genomic small RNA (size selected RNA from t. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038856(GSM458539)
D11. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM532876(GSM532876)
G547T. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191483(GSM715593)
11genomic small RNA (size selected RNA from t. (breast)
TAX577742(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191479(GSM715589)
31genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191513(GSM715623)
164genomic small RNA (size selected RNA from . (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM956925PAZD5SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
.................................GACCCCGACGTGTTCACCA...................................................................................................................................................................................................................................... 193.000.00------------------------------1.00----------------------------------------1.00----------1.00----------------------------------------------------------
...................................................................................................................................GAGGAGCCCCCGCTGCTTTT................................................................................................................................... 202.000.00--------------------------------------------------------------1.00-----------------1.00------------------------------------------------------------
............................................................................GCTCGCCAGACACCCGA............................................................................................................................................................................................. 172.000.00---------------------2.00-----------------------------------------------------------------------------------------------------------------------
................CGGCGGGCGGCGGTAAAC........................................................................................................................................................................................................................................................ 181.000.00----------1.00----------------------------------------------------------------------------------------------------------------------------------
.....................................................................GAGGTCGGGGGTGTCTGGCGAGCATGCGGC....................................................................................................................................................................................... 3011.001.00---------------------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................AGACCGGACAAGGACGGGGGCGGGGG.............................................................................................................. 2611.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CCCCGCGTCTGTCCCCGTACG.................................................. 211.000.00-----------------------------------------------1.00---------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................CGTGGCCCCCCTCGCGC...... 171.000.00-----------------------------------------------------------1.00---------------------------------------------------------------------------------
.................................................................................CCAGACACCCCCGACCTCTGGAG.................................................................................................................................................................................. 231.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------
.................................GACCCCGACGTGTTCACC....................................................................................................................................................................................................................................... 181.000.00----------------1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GGCGGGGGCAGCGGG................................................................................................................................ 1501.001.00----------------------------------------------------------------------1.00----------------------------------------------------------------------
...................................................................................................................................GAGGAGCCCCCGCTGCTTT.................................................................................................................................... 191.000.00---------------------------------------------------------------------------1.00-----------------------------------------------------------------
........................................................................................................................................AGGACGGGGGCGGGGGCAGCGGGGGC........................................................................................................................ 2611.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................CCCTCGCCGTCTTCCAAA 181.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------------------
.....................................................................................................................................GGAGCCCCCGCTGCCCCCGCCTC.............................................................................................................................. 231.000.00---------------------------------------1.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................GGGGCCACGTTCAGCTT.............. 1720.500.50----------------------------------------------------------------------------------------0.50----------------------------------------------------
.................................CTTGAACACGTCGGGGTC....................................................................................................................................................................................................................................... 1820.500.50-----------------------------------------------------------------------------------------------------------------------------0.50---------------
....................................GCTCACTTGAACACGTCGGG.................................................................................................................................................................................................................................. 2020.500.50------------------------------------------------------------------0.50--------------------------------------------------------------------------
...........................................................................................................................................................................................................................................TCAGCAGGTCCACCAGG.............................. 1730.330.33---------------------------------------------------------------------------------------0.33-----------------------------------------------------
.......................................................................................GCAGAGGTCGGGGGT.................................................................................................................................................................................... 1580.120.12-------------------------------------------------------------------------------------------------------------------------------------------0.12-