ID: uc002tra.4
GENE: IMP4(5)
chr2:131103223-131103401+


(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(6)
B-CELL
(5)
BRAIN
(14)
BREAST
(42)
CELL-LINE
(5)
CERVIX
(2)
FIBROBLAST
(5)
HEART
(3)
HELA
(1)
KIDNEY
(3)
LIVER
(3)
OTHER
(1)
RRP40.ip
(43)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
CAACGGCGTCACCGATCTGCTGGTCGTTCACGAGCATCGGGGCACACCTGGTAAGGCCGGAGGGAGGGAGTCGGGGTGGGAGCCGTCTGAGGGCAGACGGGGTCTCTGACAGCCACCTTTCCCCGCCAGTGGGGCTCATCGTCAGCCACCTGCCCTTTGGTCCTACTGCCTACTTCACG
.................................................................(((((...((((((...(((((((....))))))).(((...)))..)))))))))))........................................................
.................................................................66.............................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189782SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359199(GSM359199)
hepg2_cip_tap_pasr_b. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038857(GSM458540)
D20. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577589(Rovira)
total RNA. (breast)
GSM359198(GSM359198)
hepg2_cip_tap_pasr_a. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191539(GSM715649)
61genomic small RNA (size selected RNA from t. (breast)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGT.................................................24168.0068.005.001.001.00--2.00-4.00--1.00-2.00-3.001.001.001.00---1.00-1.00--3.001.001.002.001.002.00--1.00--2.002.00-1.00--1.00-----2.00-------2.001.00-1.00-1.00-1.00-1.00--1.00-1.001.00---1.001.001.00--1.00-1.00-1.00----------1.00----1.00----1.00-1.00--1.00-1.00---1.00--1.00---------1.00--------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGA.................................................24143.0020.007.00-5.001.004.00--1.00--1.00-1.00---1.00-1.00---1.00--2.00-2.002.00--1.00---3.00--1.001.00--1.00----------1.00--------1.002.00------------------------------1.00--------------1.00----------------------1.00------
......................................................................TCGGGGTGGGAGCCGTCTGA.........................................................................................20122.0022.004.007.00------3.00--1.00-------1.00-----------------------1.001.00------------------------------1.00-----------------------------------------------1.00-----1.00-------1.00-
..........................................................................................................TGACAGCCACCTTTCCCCGCCAG..................................................23120.0020.00---1.00-----1.00-1.00-2.00-2.002.00--2.00-3.00-----------------1.00-1.00------------------1.001.00-----------------------------------------1.00--------------------------------1.00--
......................................................................TCGGGGTGGGAGCCGTCTGAG........................................................................................21114.0014.00-6.00--------2.00--------------1.00--------------1.00----------2.00----1.00------------------------------------------1.00---------------------------------------
....................................................................AGTCGGGGTGGGAGCCGTCTGA.........................................................................................22111.0011.00-----3.00----1.00----1.00-1.00---------------------------1.00---------1.00------------------------1.00-------1.00--1.00-----------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCA...................................................22110.0010.00--3.00-1.00--1.00---1.00--------------------1.00-1.00---------------1.00--------------------------------------------------------------------------------1.00-------
......................................................................TCGGGGTGGGAGCCGTCTGAGA.......................................................................................22110.0014.005.00------------1.00--------1.00----------------------------------------------------------------1.00-------------------1.00----------------1.00--------------
..........................................................................................................TGACAGCCACCTTTCCCCGCC....................................................21110.0010.00-------1.00------1.00----1.00--------------1.00------------1.001.00-------------------------1.00-------1.00---1.00-----------------------------1.00----------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGTT................................................2519.0068.00------8.00----------------------------------------------------------------------------------------------------------------------1.00-------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCTAAT................................................2519.0010.00--5.00-4.00--------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGC.....................................................2017.007.00---------1.001.00-------1.00----1.00-------------------------------------1.00------------------------------------------------1.00----------------1.00-----------
......................................................................TCGGGGTGGGAGCCGTCTGAGT.......................................................................................2216.0014.005.00----1.00-------------------------------------------------------------------------------------------------------------------------------------
......................................................................TCGGGGTGGGAGCCGTCTGAAA.......................................................................................2215.0022.005.00------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................GACAGCCACCTTTCCCCGCCAGT.................................................2315.005.004.00-------------------------------------------------------------------------------------------------------------------------------------1.00----
........................................................................................................TCTGACAGCCACCTTTCCCCGC.....................................................2214.004.00-----------1.00-----------1.00--------------------------1.00-----------------1.00----------------------------------------------------------------------
...................................................TAAGGCCGGAGGGAGGGAGTCGGGGTGGGAGCCGTCTGAGGGCAGACGGGGTCTCTGACAGCCACCTTTCCCCG......................................................7414.004.00--------------------4.00----------------------------------------------------------------------------------------------------------------------
.........................................................................................................CTGACAGCCACCTTTCCCCG......................................................2014.004.00---2.00------------------------------------------2.00--------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCT...................................................2213.0010.00-----------------------------------------------------------2.00--------------------------------------------1.00----------------------------------
......................................................................TCGGGGTGGGAGCCGTCT...........................................................................................1813.003.00--------3.00----------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCG......................................................1913.003.00---1.00--------------------1.00--------------------1.00---------------------------------------------------------------------------------------------
.................TGCTGGTCGTTCACGAGCATCGGGGCACA.....................................................................................................................................2913.003.00------------------------------------------------------2.00----------------------------------------------------------------1.00-------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCATT.................................................2413.0010.00-------------------------------------1.00-----------------------------------1.00-------------------------------1.00---------------------------------
.........................................................................................................CTGACAGCCACCTTTCCCCGCCA...................................................2312.002.00------------1.00--------------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAAA.................................................2412.0010.00-----------------------------------------1.00------------------------------------------------------------1.00------------------------------------
........................................................................................................TCTGACAGCCACCTTTCCCC.......................................................2012.002.00------------------------------2.00------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAT..................................................2312.0010.00-----------------1.00----------------------------------------------------------------------------------------------------1.00--------------------
.........................................................................................................CTGACAGCCACCTTTCCCCGCCAGT.................................................2512.002.00---------------------------------1.00-----------------------------------------------------------1.00---------------------------------------------
......................................................................TCGGGGTGGGAGCCGTCTGT.........................................................................................202.000.00------------------1.00-------------1.00----------------------------------------------------------------------------------------------------------
......................................................................TCGGGGTGGGAGCCGTCTGAA........................................................................................2112.0022.00-2.00-----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGGA................................................2512.0020.002.00------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GTCGGGGTGGGAGCCGTCTGAGT.......................................................................................232.000.00-----2.00-------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................TCTGACAGCCACCTTTCCCCG......................................................2111.001.00------------------------1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................CCGCCAGTGGGGCTCATCGTCAGC.................................2411.001.00--------------------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................GCCGTCTGAGGGCAGAGGGG..............................................................................201.000.00----------------------------------------------------------------------------------------------------1.00--------------------------------------
.....................................................................................................GTCTCTGACAGCCACCTTTCCCCGC.....................................................2511.001.00----------------------------------------------------------------------------------------------------------------1.00--------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGAA................................................2511.0020.00------------------1.00------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CTGACAGCCACCTTTCCCCGCCATT.................................................2511.002.00------------------------------------------------------------------------------------------------------------------------------1.00------------
....................................................................AGTCGGGGTGGGAGCCGTCTG..........................................................................................2111.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CTGACAGCCACCTTTCCCCGCA....................................................221.000.00-------------------------------------------------------------------1.00-----------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCTCAT................................................2511.0010.00--1.00----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGTAA...............................................2611.0068.00-------------------------------------------------------------------------------------------------------------------1.00-----------------------
........................................................................................................................................................CCCTTTGGTCCTACTGCCTACTTCACG2711.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGTAT...............................................2611.0068.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAAT.................................................2411.0010.00-------------------------------------------------------------------------------------------------------------------------------------1.00-----
......................................................................TCGGGGTGGGAGCCGTC............................................................................................1711.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCATAA................................................2511.0010.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................TCGGGGTGGGAGCCGTCTGAT........................................................................................2111.0022.00--------------------------------------------------------------------------------------------------------------------------------1.00----------
.........................................................................................................................................................CCTTTGGTCCTACTGCCTAC......2011.001.00-----------------------------------------------------------------------------------------1.00-------------------------------------------------
.........................................................................................................CTGACAGCCACCTTTCCCCGCC....................................................2211.001.00-----------------------------------------------------1.00-------------------------------------------------------------------------------------
.........................................................................................................CTGACAGCCACCTTTCCCCGCCATA.................................................2511.002.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CTGACAGCCACCTTTCCCCGCCAT..................................................2411.002.00---------------------------------1.00---------------------------------------------------------------------------------------------------------
..............................................................GGAGGGAGTCGGGGTGGGAGGT...............................................................................................221.000.00----------------------1.00--------------------------------------------------------------------------------------------------------------------
.............GATCTGCTGGTCGTTCACGAGCAT..............................................................................................................................................2411.001.00------------------------------------1.00------------------------------------------------------------------------------------------------------
...........................................................GAGGGAGGGAGTCGGGGTGGGAA.................................................................................................2311.001.00--------------------------------------------------------------------------------------------------------------------------1.00----------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGGT................................................2511.0020.00---------1.00---------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCTAGA.................................................2411.007.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................TCTGACAGCCACCTTTCCCCGCC....................................................2311.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------------
......................................................................................CTGAGGGCAGACGGGGCG...........................................................................181.000.00------------------------------------------1.00------------------------------------------------------------------------------------------------
......................................................................TCGGGGTGGGAGCCGTCTGAGG.......................................................................................2211.001.001.00------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAA..................................................2311.0010.00------------------------------------------------------------------------------------------1.00------------------------------------------------
....................................................................AGTCGGGGTGGGAGCCGTC............................................................................................1911.001.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCTAA.................................................2411.0010.00----------------------------------------------------1.00--------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCAAGA.................................................2411.007.00-------------------------------------------------------------------------------------------------------------------------1.00-----------------
..........................................................................................................TGACAGCCACCTTTCCCCGTCAG..................................................2311.003.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGAT................................................2511.0020.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAAGA................................................2511.0010.00-------------------------------------------------------------------------------1.00-----------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCAGTA................................................2511.0068.00----------------------------------------------------1.00--------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCG.......................................................181.000.00------------------------1.00------------------------------------------------------------------------------------------------------------------
............................CACGAGCATCGGGGCACACCTG.................................................................................................................................2211.001.00----------------------------------------------------------1.00--------------------------------------------------------------------------------
............................................................................................................................................................TTGGTCCTACTGCCTACTTCACG2311.001.00------------------------------------1.00------------------------------------------------------------------------------------------------------
....................TGGTCGTTCACGAGCATCGGGGCACACCTG.................................................................................................................................3011.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------------
.................TGCTGGTCGTTCACGAGCAT..............................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------1.00----------------------------------------
....................TGGTCGTTCACGAGCATCGGGGCACACATG.................................................................................................................................301.000.00---------1.00---------------------------------------------------------------------------------------------------------------------------------
...........................................................GAGGGAGGGAGTCGGGGTGGGA..................................................................................................2211.001.00--------------------------------1.00----------------------------------------------------------------------------------------------------------
................................AGCATCGGGGCACACCGTGG...............................................................................................................................201.000.00------------------------------------------------------------------------------------1.00------------------------------------------------------
...........................TCACGAGCATCGGGGCACACCTGT................................................................................................................................241.000.00------------------------------------------------------------------------------------------------------------------1.00------------------------
....................................................................AGTCGGGGTGGGAGCCGTCTTA.........................................................................................221.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCCGT.................................................2411.0010.00--------------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................AGTCGGGGTGGGAGCCGCCTG..........................................................................................211.000.00-------------------------------------------------------------------------------------------------1.00-----------------------------------------
..............................................................................................................AGCCACCTTTCCCCGT.....................................................161.000.00---------------------------------------------------------------------------------------------------------------------------------------1.00---
.....................................................................................TCTGAGGGCAGACGGGT.............................................................................171.000.00----------------------------------------------------------------------1.00--------------------------------------------------------------------
..........................................................................................................TGACAGCCACCTTTCCCCGCCACG.................................................2411.0010.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
......................................................................TCGGGGTGGGAGCCGTCTGAAAG......................................................................................2311.0022.00----------------------------------------------------------------1.00--------------------------------------------------------------------------
........................................................................................GAGGGCAGACGGGGTCTCT........................................................................1911.001.00------------------------------------1.00------------------------------------------------------------------------------------------------------
......CGTCACCGATCTGCTG.............................................................................................................................................................1611.001.00-------------------------------------------------------1.00-----------------------------------------------------------------------------------
.AACGGCGTCACCGATCTG................................................................................................................................................................1811.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------
.........................................................................................................CTGACAGCCACCTTTCCCCGCCTAT.................................................2511.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................GGAGGGAGTCGGGGTGATA..................................................................................................191.000.00-----------------------------------------------------------------------------------------------1.00-------------------------------------------
........................................................................................................TCTGACAGCCACCTTT...........................................................1690.110.11-------------0.11-----------------------------------------------------------------------------------------------------------------------------

Antisense strand
CAACGGCGTCACCGATCTGCTGGTCGTTCACGAGCATCGGGGCACACCTGGTAAGGCCGGAGGGAGGGAGTCGGGGTGGGAGCCGTCTGAGGGCAGACGGGGTCTCTGACAGCCACCTTTCCCCGCCAGTGGGGCTCATCGTCAGCCACCTGCCCTTTGGTCCTACTGCCTACTTCACG
.................................................................(((((...((((((...(((((((....))))))).(((...)))..)))))))))))........................................................
.................................................................66.............................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189782SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359199(GSM359199)
hepg2_cip_tap_pasr_b. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038857(GSM458540)
D20. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577589(Rovira)
total RNA. (breast)
GSM359198(GSM359198)
hepg2_cip_tap_pasr_a. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191539(GSM715649)
61genomic small RNA (size selected RNA from t. (breast)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................GGCCGGAGGGAGGGAGG............................................................................................................ 171.000.00------------------------------------------------1.00------------------------------------------------------------------------------------------
...........................................................CAGACGGCTCCCACCCCGACTCCCTCCCTC.......................................................................................... 3011.001.00------------1.00------------------------------------------------------------------------------------------------------------------------------
..............................................................................................AGACGGGGTCTCTGAACA................................................................... 181.000.00--------------------------------------------------------------------------------------------1.00----------------------------------------------
.................................................................CTCCCACCCCGACTCCC................................................................................................. 1770.140.14------------------------------------------------------------------------------------------------------------------------------------------0.14