ID: uc002tpv.1_intron_0_0_chr2_130001224_r
GENE: LOC151121(4)
chr2:130001174-130001765-


(1)
BRAIN
(1)
BREAST
(8)
CELL-LINE
(1)
CERVIX
(5)
HEART
(2)
LIVER
(1)
OTHER
(7)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
ACAAGGAGACTTCTCTTTATAATAACAGAACCCAGAAGACGACCTACAAGGTGAGCATGAGAACTGAAGGTTATTCAAATAAAGATGTTTCTGAGCAAAGGCTAAGTTAACCACTCAAAGACTGAAAGAACTAACAAAATATATGCTTCATGGTGAAATAAACTTAATCCTGAAGAAATAATTAAGACAAACATGAAAACAGAGAAAAAGAAAGTTGTCAGGATAGAGTATATCAAGCAAGAAAGAATTAAATATAGAAACAAGGTGAACTGAAACATCAGGTAGGAAGAAACATGCAAAATGAGGAGAGTGAGTAATTCGAGTTTCAAGAAACTGTATCAAAGTTCTTACACTTGTTGACCAAAAGTGGAAATTATGGATCAACTTTAGACATTTTGAAATAAAGAACATATCCTCAAAGCTTAAGTGTAACCACCAAAAAATGAAAAGGAGATTTATAACTAAATCTCCTGAACCAGTAGAAGTTATACTTATAGAAACCTTAATAAATCTAGCTCATGTGACTTTTCTCTTCTTCCTAGGTTCTGCCCACAGGGGAGATTGTGACCTATTGCTGGCCCCAACACCAAGT
..................................................................................................................................................................................................................................................................((((((.....((((....))))(((((((.....(((((...(((((.((((.....))))...)))))......))))).....))))))).))))))..........................................................................................................................................................................................................................................
..................................................................................................................................................................................................................................................................259....................................................................................................362....................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343336SRR343337SRR343334SRR343335SRR189782SRR189783SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532874(GSM532874)
G699T. (cervix)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
TAX577741(Rovira)
total RNA. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
.......................................................................................................................................................................................................................................................................GGTGAACTGAAACATC.........................................................................................................................................................................................................................................................................................................................16125.0025.009.0010.003.003.00--------------------------------
.......................................................................................................................................................................................................................................................................GGTGAACTGAAACATCTCAG.....................................................................................................................................................................................................................................................................................................................20112.0025.004.00-4.001.00--1.00----1.00--1.00---------------------
.......................................................................................................................................................................................................................................................................GGTGAACTGAAACATCTAAG.....................................................................................................................................................................................................................................................................................................................20110.0025.001.00--1.005.002.00--1.00---------------------------
........................................................................................................................................................................................................................................................................GTGAACTGAAACATCTC.......................................................................................................................................................................................................................................................................................................................1778.572.142.432.712.001.43--------------------------------
.......................................................................................................................................................................................................................................................................GGTGAACTGAAACATCTCA......................................................................................................................................................................................................................................................................................................................1917.0025.003.00-2.001.00------------1.00-------------------
.......................................................................................................................................................................................................................................................................GGTGAACTGAAACATCTC.......................................................................................................................................................................................................................................................................................................................1815.0025.002.00--3.00--------------------------------
.......................................................................................................................................................................................................................................................................GGTGAACTGAAACATCT........................................................................................................................................................................................................................................................................................................................1714.0025.002.00-1.001.00--------------------------------
........................................................................................................................................................................................................................................................................GTGAACTGAAACATCTAAG.....................................................................................................................................................................................................................................................................................................................1973.142.140.860.570.140.14-----1.43--------------------------
........................................................................................................................................................................................................................................................................GTGAACTGAAACATCTCAG.....................................................................................................................................................................................................................................................................................................................1972.292.141.001.000.140.14--------------------------------
........................................................................................................................................................................................................................................................................GTGAACTGAAACATC.........................................................................................................................................................................................................................................................................................................................1572.142.140.430.290.140.29------0.14-------------0.57--------0.14-0.14
........................................................................................................................................................................................................................................................................GTGAACTGAAACATCT........................................................................................................................................................................................................................................................................................................................1671.142.140.140.290.430.29--------------------------------
.......................................................................................................................................................................................................................................................................GGTGAACTGAAACAT..........................................................................................................................................................................................................................................................................................................................1581.121.12--0.500.50-------0.12------------------------
...................................................................................................................................................................................................................................................................................................................................................CAAAGTTCTTACACTTCAG..........................................................................................................................................................................................................................................191.000.00-------1.00----------------------------
....................................................................................................................................AACAAAATATATGCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00----1.00-------------------------------
...................................................................................................................................................................................................................................................................................................................................................CAAAGTTCTTACACTGAA...........................................................................................................................................................................................................................................181.000.00-------1.00----------------------------
...........................................................................................................................................................................................................................AGGATAGAGTATATCAAG...................................................................................................................................................................................................................................................................................................................................................................1821.001.00-------------1.00----------------------
.....................................................................................................................................................................AATCCTGAAGAAATAAGTC........................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------1.00---------------
.......................................................................................................................................................................................................................................................................GGTGAACTGAAACATCTAA......................................................................................................................................................................................................................................................................................................................1911.0025.00--------1.00---------------------------
........................................................................................................................................................................................................................................................................GTGAACTGAAACATCTCA......................................................................................................................................................................................................................................................................................................................1870.712.140.290.140.140.14--------------------------------
........................................................................................................................................................................................................................................................................GTGAACTGAAACATCTAA......................................................................................................................................................................................................................................................................................................................1870.432.140.140.29----------------------------------
........................................................................................................................................................................................................................................................................GTGAACTGAAACATCA........................................................................................................................................................................................................................................................................................................................1630.330.330.33-----------------------------------
.............................ACCCAGAAGACGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1540.250.25-------------------------------0.25----
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTGTAACCACCA..........................................................................................................................................................1540.250.25------------------------------0.25-----

Antisense strand
ACAAGGAGACTTCTCTTTATAATAACAGAACCCAGAAGACGACCTACAAGGTGAGCATGAGAACTGAAGGTTATTCAAATAAAGATGTTTCTGAGCAAAGGCTAAGTTAACCACTCAAAGACTGAAAGAACTAACAAAATATATGCTTCATGGTGAAATAAACTTAATCCTGAAGAAATAATTAAGACAAACATGAAAACAGAGAAAAAGAAAGTTGTCAGGATAGAGTATATCAAGCAAGAAAGAATTAAATATAGAAACAAGGTGAACTGAAACATCAGGTAGGAAGAAACATGCAAAATGAGGAGAGTGAGTAATTCGAGTTTCAAGAAACTGTATCAAAGTTCTTACACTTGTTGACCAAAAGTGGAAATTATGGATCAACTTTAGACATTTTGAAATAAAGAACATATCCTCAAAGCTTAAGTGTAACCACCAAAAAATGAAAAGGAGATTTATAACTAAATCTCCTGAACCAGTAGAAGTTATACTTATAGAAACCTTAATAAATCTAGCTCATGTGACTTTTCTCTTCTTCCTAGGTTCTGCCCACAGGGGAGATTGTGACCTATTGCTGGCCCCAACACCAAGT
..................................................................................................................................................................................................................................................................((((((.....((((....))))(((((((.....(((((...(((((.((((.....))))...)))))......))))).....))))))).))))))..........................................................................................................................................................................................................................................
..................................................................................................................................................................................................................................................................259....................................................................................................362....................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343336SRR343337SRR343334SRR343335SRR189782SRR189783SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532874(GSM532874)
G699T. (cervix)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
TAX577741(Rovira)
total RNA. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTCTTCTTCCTAGTAGT.............................................. 211.000.00-----------------1.00------------------
..........................................................................................................................................................................................................AGAAAAAGAAAGTTGTAAT................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00----------------------1.00-------------
................................................................................................................................................................................................................................................................................................................GGAGAGTGAGTAATTGCCG............................................................................................................................................................................................................................................................................. 191.000.00------------1.00-----------------------
........................................................................................................................................................................................................AGAGAAAAAGAAAGTTGTTG.................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00---------------------1.00--------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGACTTTTCTCTTAGA....................................................... 191.000.00------------------1.00-----------------
........................................................................................................................................................................................................AGAGAAAAAGAAAGTTGTTCA................................................................................................................................................................................................................................................................................................................................................................................... 211.000.00---------------1.00--------------------
....................................................ATTTGAATAACCTTCAGTTCTCATGCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 2811.001.00-------------------1.00----------------
....................................................TTTGAATAACCTTCAGTTCTCATGCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 2711.001.00----------1.00-------------------------
....................................................TATTTGAATAACCTTCAGTTCTCATGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2911.001.00------1.00-----------------------------
.................................AGAAGACGACCTACAACCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00----1.00-------------------------------
.....................TCTTCTGGGTTCTGTTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1820.500.50-----------------------0.50------------
....................................................CCTTCAGTTCTCATGCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1820.500.50-------------------------0.50----------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTCACAATCTCC..................... 1560.330.33----------------------------0.33-------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGAGAAAAGTCACAT........................................................ 1830.330.33--------------------------0.33---------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTGTGGGCAGAACCTAGGAAGAAGAGAA.................................. 3130.330.33---------------------------0.33--------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCAGAACCTAGGAAGAAGA....................................... 2340.250.25-----------------------------0.25------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCTGTGGGCAGAACC................................. 1840.250.25-----------------------0.25------------
....................................................TTCAGTTCTCATGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 1650.200.20--------------------------------0.20---
....................TCTGGGTTCTGTTATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 1670.140.14----------------------------------0.14-