| (1) B-CELL | (3) BREAST | (6) CELL-LINE | (1) CERVIX | (2) HEART | (2) HELA | (2) LIVER | (2) OTHER | (5) SKIN |
| ACTTCACTCCAGCATGGGTAACAGAGTGAGACCCTGTCTCAAAATTTTTTTAAAATTAAAAATTTAAAAAAAGGAAATAGAGTATAAATTGTGCAGTGTGCTGGACAGAAATAATTGGACAAATACTCATCCTCTGAGATGTTGTAGATGAAGGCAGTTTTTTTCTTATTTGCTACATGTGCTTTTCTTTTGTGTTTTAGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTG ..........................................................................................((.(((....))).)).((((.(((((..((..(((.((((......))))..)))..))....)))))..))))..................................................................................... ..........................................................................................91..............................................................................171............................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | TAX577580(Rovira) total RNA. (breast) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR040037(GSM532922) G243T. (cervix) | TAX577740(Rovira) total RNA. (breast) | SRR189785 | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | TAX577741(Rovira) total RNA. (breast) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................TGAGATGTTGTAGATC.................................................................................................... | 16 | 136.00 | 0.00 | 136.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................GTGTGCTGGACAGAAATAATTGGAC.................................................................................................................................. | 25 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................................................................................................................GTCTATGGCCACTCCATC..... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................TCTGAGATGTTGTAGATGAAGGCAGTTTTT........................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TGAAGGCAGTTTTTTTTTA................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................GATGTTGTAGATGAAGGCA.............................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TTTTTTTAAAATTAAAAGAT.......................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................TTTTAGTGCCAAACCACG...................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................AGATGTTGTAGATGAAGGCAG............................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................................................................CACGTGTCTATGGCCACTCCG....... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GTGCCAAACCCAAGTC................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - |
| .............................................................................................................................................TTGTAGATGAAGGCAG............................................................................................. | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |
| ACTTCACTCCAGCATGGGTAACAGAGTGAGACCCTGTCTCAAAATTTTTTTAAAATTAAAAATTTAAAAAAAGGAAATAGAGTATAAATTGTGCAGTGTGCTGGACAGAAATAATTGGACAAATACTCATCCTCTGAGATGTTGTAGATGAAGGCAGTTTTTTTCTTATTTGCTACATGTGCTTTTCTTTTGTGTTTTAGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTG ..........................................................................................((.(((....))).)).((((.(((((..((..(((.((((......))))..)))..))....)))))..))))..................................................................................... ..........................................................................................91..............................................................................171............................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | TAX577580(Rovira) total RNA. (breast) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR040037(GSM532922) G243T. (cervix) | TAX577740(Rovira) total RNA. (breast) | SRR189785 | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | TAX577741(Rovira) total RNA. (breast) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................GTAACAGAGTGAGACGC........................................................................................................................................................................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................ATTGTGCAGTGTGCTGGTT................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................AAAATTTAAAAAAAGGAAACTCA......................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................ACCCTGTCTCAAAATGGTG......................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .........................................................AAAAATTTAAAAAAAGGAAATTTTG........................................................................................................................................................................ | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................AAAAGGAAATAGAGTATCTCT................................................................................................................................................................. | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................ATTTAAAAAAAGGAAATCGCG........................................................................................................................................................................ | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................GAGTGAGACCCTGTCTCAAAATAGGC......................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................AATTTAAAAAAAGGAAACTTT......................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................GTTTTAGTGCCAAACTCTG...................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .......................................................................................ATTGTGCAGTGTGCTGGGC................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................TAAAAAAAGGAAATACTTG....................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................GAAATAGAGTATAAATTTTA............................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................ATGAGTATTTGTCCAATT........................................................................................................................ | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ..................................................................................................................ATGAGTATTTGTCCAA........................................................................................................................ | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |