ID: uc002tpg.1_intron_19_0_chr2_128526576_r.3p
GENE: (2)
chr2:128526526-128526775-


(1)
B-CELL 		(1)
BREAST 		(9)
CELL-LINE 		(2)
HEART 		(1)
HELA 		(5)
LIVER 		(7)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TCTAAGCAATGTTAGTAGGATCAGAAGGGAAAGCTCTCTAAGGCACCCACTATTTGTTTTAGAAAATAATATTTTTTAATTCTGTTTATCCATTTTTAATATAGCTTACATTTTGTTAATTTCAAATTGAGTATAATCAGACCATATAGTCATTAATTGATCTATTTATTTATTTATTTATTTATTTATTTATTTAACAGAACAGAATATGGCAAAGAGACCAGAGAGATATGCGGGCAATTCAGCCTGA
...............................................................................................................................((((((............(((((((.....))).)))).............))))))..................................................................
............................................................................................................109............................................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTAAAG.......................................................34131.000.0020.0050.0047.0014.00-----------------------
.....................................................................................................................................................................TTATTTATTTATTTATTTATTTATTTATTTAACAG..................................................356100.50100.5025.8339.3321.3314.00-----------------------
.........................................................................................................................................................................TTATTTATTTATTTATTTATTTATTTAACAG..................................................31766.7166.7119.8619.7116.0011.14-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTAACAG..............................................................2929.000.008.004.0010.007.00-----------------------
.......................................................................................................................................................................ATTTATTTATTTATTTATTTATTTATTTAACAG..................................................33626.8326.836.839.835.504.67-----------------------
......................................................................................................................................................................TATTTATTTATTTATTTATTTATTTATTTAACAG..................................................34620.1720.174.336.506.003.33-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTCTG............................................................3015.000.002.005.007.001.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATG................................................................2714.000.006.00--6.002.00----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTAAA........................................................3314.000.00-9.003.002.00-----------------------
...........................................................................................................................................................................ATTTATTTATTTATTTATTTATTTAACAG..................................................29813.2513.254.004.122.622.38-0.12---------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTAAG............................................................3111.000.005.004.001.001.00-----------------------
..........................................................................................................................................................................TATTTATTTATTTATTTATTTATTTAACAG..................................................30810.8810.883.003.122.382.38-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTTATG........................................................3510.000.003.001.00-6.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTAACAG..................................................................259.000.002.001.001.005.00-----------------------
...................................................................................................................................................................ATTTATTTATTTATTTATTTATCATG.............................................................266.000.003.00--3.00-----------------------
....................................................................................................................................................................TTTATTTATTTATTTATTTATTTATTTATTTAACAG..................................................3655.605.601.602.401.400.20-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATAG...............................................................285.000.002.00-1.00--2.00---------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATCAAG.............................................................305.000.003.00--2.00-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTAACAG..............................................................285.000.00--4.001.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTCTAG...........................................................305.000.004.00--1.00-----------------------
..................................................................................................................................................................TATTTATTTATTTATTTATTTATTTATTTATCAG......................................................344.000.002.001.00-1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTACT................................................................274.000.00----4.00----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTTAAC........................................................354.000.00-1.002.001.00-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTACG............................................................304.000.001.00--2.00-1.00---------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTTATA........................................................353.000.00-1.002.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTCTG....................................................................233.000.002.00--1.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTCTG............................................................293.000.001.001.001.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTCTTG............................................................313.000.001.00--2.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTAACAG......................................................353.000.00--2.001.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTCATG............................................................293.000.001.00--2.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATA............................................................313.000.001.00--2.00-----------------------
...................................................................................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCAG......................................................333.000.001.00-1.00--1.00---------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTCAG.........................................................323.000.003.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTTAAA........................................................353.000.00-1.002.00------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTCTTG............................................................293.000.002.00--1.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTACTTG..........................................................313.000.002.00-1.00------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATCTAG.............................................................283.000.002.00--1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTAACA...............................................................283.000.001.00-2.00------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTCATG............................................................303.000.00---2.00-1.00---------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTCAAG...........................................................323.000.00---3.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATCTAG.............................................................303.000.001.00--2.00-----------------------
.....................................................................................................................................................................TTATTTATTTATTTATTTATTTATTTATTTAACA...................................................3472.572.570.711.430.43------------------------
........................................................................................................................................................................TTTATTTATTTATTTATTTATTTATTTAACAG..................................................3262.332.330.171.830.33------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATAG...........................................................312.000.00---1.00-1.00---------------------
..TAAGCAATGTTAGTAGGAT.....................................................................................................................................................................................................................................1912.002.00--------2.00------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATCTTG.................................................................262.000.00---2.00-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATATAG.........................................................332.000.00--2.00------------------------
...................................................................................................................................................................ATTTATTTATTTATTTATTTATTTATCTCG.........................................................302.000.00--2.00------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTCTT........................................................342.000.00-2.00-------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTCATG........................................................342.000.001.00--1.00-----------------------
....................................................................................................................................................................TTTATTTATTTATTTATTTATTTATTTATCTCG.....................................................332.000.002.00--------------------------
..................................................................................................................................................................TATTTATTTATTTATTTATTTATTTATCTGC.........................................................312.000.00----2.00----------------------
................................................................................................................................................................................................................................AGAGATATGCGGGCAATTCA......2012.002.00------------2.00--------------
....................................................................................................................................................................TTTATTTATTTATTTATTTATTTATCTGC.........................................................292.000.00----2.00----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTAAG................................................................272.000.002.00--------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATCTTG.........................................................332.000.002.00--------------------------
.....................................................................................................................................................................TTATTTATTTATTTATTTATTTATCATG.........................................................282.000.002.00--------------------------
...............................................................................................................................................................................................................................GAGAGATATGCGGGCAATTCAGC....2312.002.00----------2.00----------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTAG..........................................................332.000.002.00--------------------------
...................................................................................................................................................................ATTTATTTATTTATTTATTTATTTATCTGC.........................................................302.000.00------2.00--------------------
........ATGTTAGTAGGATCAGAAG...............................................................................................................................................................................................................................1912.002.00-------------2.00-------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTCAG.........................................................332.000.002.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTCTAG.......................................................342.000.001.00--1.00-----------------------
...................................................................................................................................................................................................................GCAAAGAGACCAGAGAGATATG.................2212.002.00---------2.00-----------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTCT.............................................................292.000.00-1.001.00------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTCATG........................................................332.000.001.00-1.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTTTAG........................................................352.000.001.00--1.00-----------------------
.....................................................................................................................................................................TTATTTATTTATTTATTTATTTATCTCG.........................................................282.000.002.00--------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTAAAG...........................................................312.000.00-1.001.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTACG................................................................272.000.001.00--1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTCAG.............................................................302.000.00---2.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTCTG................................................................272.000.002.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTAACAG..............................................................272.000.002.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTAAG.............................................................302.000.00--2.00------------------------
....................................................................................................................................................................TTTATTTATTTATTTATTTATTTATTTATCCG......................................................322.000.00-2.00-------------------------
...........................................................................................................................................................ATTGATCTATTTATTTATTTATTTATTT...................................................................2812.002.00------2.00--------------------
...................................................................................................................................................................ATTTATTTATTTATTTATTTATTTATCGGT.........................................................302.000.00----2.00----------------------
.........................................................................................................................................................................TTATTTATTTATTTATTTATTTATTTAACA...................................................3081.881.880.380.620.620.25-----------------------
............................................................................................................................................................................TTTATTTATTTATTTATTTATTTAACAG..................................................2891.441.44-0.560.560.33-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTATTG............................................................301.000.00---1.00-----------------------
.....................................................................................................................................................................................................................AAAGAGACCAGAGAGATATGCG...............2211.001.00-------1.00-------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTCATG............................................................311.000.00---1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTAACAT..........................................................331.000.00--1.00------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATCG...........................................................301.000.001.00--------------------------
..............................................................................................................................................................................................................................AGAGAGATATGCGGGCAGTTG.......211.000.00-------1.00-------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTCTC............................................................301.000.00----1.00----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTCTTG...........................................................301.000.001.00--------------------------
.....................................................................................................................................................................................................................AAAGAGACCAGAGAGATATGCGG..............2311.001.00---------------1.00-----------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATCAG..........................................................331.000.001.00--------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTCTTG.......................................................351.000.00---1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATCG...........................................................321.000.001.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTAACAT..........................................................311.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTAA..........................................................331.000.00-1.00-------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTAAT.................................................................261.000.00--1.00------------------------
..............................................................................................................................................................GATCTATTTATTTATTTATTG.......................................................................211.000.00--1.00------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTAAAT.......................................................341.000.00--1.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTCG.............................................................301.000.00---1.00-----------------------
...........TTAGTAGGATCAGAAGGGAAAGCTCTCTA..................................................................................................................................................................................................................2911.001.00-------------------------1.00-
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTCT..........................................................311.000.00--1.00------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTAGG........................................................341.000.00--1.00------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTAAAG.......................................................351.000.00-1.00-------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATCTAG.................................................................261.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATAG...................................................................241.000.00---1.00-----------------------
...............................................................................................................................................................................ATTTATTTATTTATTTATTTAACTTTG................................................271.000.001.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATCTAG.................................................................241.000.00--1.00------------------------
........................................................................................................................................................................TTTATTTATTTATTTATTTATTTATTTAACTAC.................................................331.000.00--1.00------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTCCG............................................................301.000.00--1.00------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTTAG........................................................341.000.001.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTAAAA.......................................................341.000.00--1.00------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTAAAG............................................................291.000.00-----1.00---------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTAAG........................................................341.000.00---1.00-----------------------
..............................................................................................................................................................GATCTATTTATTTATTTATTTG......................................................................221.000.00---1.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTACAG.......................................................341.000.00-1.00-------------------------
...................................................................................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCCTG.....................................................341.000.001.00--------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATCCGC.........................................................331.000.00--1.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTCAG.........................................................341.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTAACA...................................................................241.000.001.00--------------------------
..............................................................................................................................................................................................................................AGAGAGATATGCGGGCAATTCA......2211.001.00--------------------1.00------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTAA..............................................................291.000.00--1.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTAATT...........................................................321.000.00-----1.00---------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTCTC........................................................331.000.001.00--------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTAACA.......................................................351.000.00-1.00-------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTACTTG......................................................351.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTCCTT........................................................................191.000.00---1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATAAA..........................................................331.000.00-1.00-------------------------
..................................................................................................................................................................................................................GGCAAAGAGACCAGAGAGATATGCGG..............2611.001.00------------------------1.00--
.....................................................................................................................................................................TTATTTATTTATTTATTTATTTATTTATTTAACGG..................................................351.000.00---1.00-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTGGGG...............................................................271.000.00----1.00----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTAACAA..................................................................251.000.00---1.00-----------------------
...........................................................................................................................................................................................................AGAATATGGCAAAGAATA.............................181.000.00---------------------1.00-----
................................................................................................................................................................TCTATTTATTTATTTATTTATTTACG................................................................261.000.00---1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTAATTA..........................................................331.000.001.00--------------------------
..............................................................................................................................................................GATCTATTTATTTATTTATTTATTTATTTATTTTG.........................................................351.000.00-1.00-------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTCCTG.......................................................351.000.00--1.00------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTCATG................................................................261.000.001.00--------------------------
...................................................................................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCCG......................................................331.000.00-1.00-------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTACG........................................................341.000.001.00--------------------------
...............................................................................................................................................................................................................TATGGCAAAGAGACCAGAGAGATATGCGGGC............3111.001.00------1.00--------------------
..............................................................................................................................................................GATCTATTTATTTATTTATTTATTTATTTATTG...........................................................331.000.00--1.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTTTTA........................................................351.000.00-1.00-------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTAATAG..............................................................291.000.00---1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTAACAA..............................................................291.000.00--1.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTAAA.............................................................301.000.00-1.00-------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTTATA.......................................................351.000.00-1.00-------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTAATAG..................................................................251.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTACTAG..............................................................291.000.001.00--------------------------
.................................................................................................................TGTTAATTTCAAATTCACA......................................................................................................................191.000.00----------------1.00----------
...................................................................................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCCC......................................................331.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTCTTG........................................................351.000.00---1.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATAAG..............................................................271.000.00--1.00------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTGGAG...............................................................271.000.00----1.00----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTACG............................................................291.000.00---1.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATAATG.................................................................241.000.001.00--------------------------
..................................................................TAATATTTTTTAATTCTTTT....................................................................................................................................................................201.000.00-----1.00---------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATAG...........................................................321.000.00---1.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTAATG............................................................291.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTCTG.............................................................301.000.00---1.00-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTAACA...............................................................271.000.00--1.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATAT...........................................................321.000.00-1.00-------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTGAGG...........................................................321.000.00----1.00----------------------
.............................................................................................................................................................TGATCTATTTATTTATTTATTTTGCC...................................................................261.000.00----1.00----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTATAG.......................................................351.000.001.00--------------------------
...................................................................................................................................................................................ATTTATTTATTTATTTAACCCAG................................................231.000.00---1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTCAG.................................................................261.000.00----1.00----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTAAAA...........................................................311.000.00--1.00------------------------
......................................................................................................................................................................................................................AAGAGACCAGAGAGATATGC................2011.001.00--------------1.00------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTCTTG................................................................271.000.001.00--------------------------
................................................................................................................................................................TCTATTTATTTATTTATTCAAG....................................................................221.000.00-----1.00---------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTAATC...............................................................281.000.00----1.00----------------------
..............................................................................................................................................................................TATTTATTTATTTATTTATTTAACAGTGG...............................................291.000.00----1.00----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTCAAA............................................................291.000.00---1.00-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATCG...............................................................271.000.00---1.00-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTCTTG............................................................301.000.001.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATCTAC.............................................................281.000.00---1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTTCTG........................................................351.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATCAG..............................................................291.000.00--1.00------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTATCAG......................................................351.000.001.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATCTTG.........................................................321.000.00---1.00-----------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTCCAG...............................................................271.000.00---1.00-----------------------
..............................................................................................................................................................GATCTATTTATTTATTTATTTATG....................................................................241.000.00--1.00------------------------
..............................................................................................................................................................GATCTATTTATTTATTTATTTATC....................................................................241.000.00-----1.00---------------------
.........................................................................................................................................................................................................................AGACCAGAGAGATATGCGGGCAATCCAG.....281.000.00-----1.00---------------------
.................................................................................................................................................................CTATTTATTTATTTATTTCCA....................................................................211.000.001.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTAACG...............................................................261.000.00---1.00-----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTCTTG.......................................................341.000.001.00--------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTCACT................................................................261.000.00------1.00--------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTCAG.............................................................291.000.001.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTCTG.............................................................281.000.001.00--------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTATTTCCG........................................................341.000.00---1.00-----------------------
.......................................................................TTTTTTAATTCTGTTTCAGG...............................................................................................................................................................201.000.00----1.00----------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTATAG.......................................................341.000.001.00--------------------------
.............................................................................................................................................................................................................................CAGAGAGATATGCGGGCAATTCAG.....2411.001.00-----------------1.00---------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTATTTACGC...........................................................311.000.00----1.00----------------------
..............................................................................................................................................................GATCTATTTATTTATTTATTTATTTATTTTG.............................................................311.000.001.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATAAAG.........................................................321.000.00-1.00-------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTAG..................................................................251.000.00---1.00-----------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTATTTC..........................................................331.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTCG.................................................................261.000.001.00--------------------------
.......AATGTTAGTAGGATCAGA.................................................................................................................................................................................................................................1811.001.00------------------1.00--------
................................................................................................................................................................TCTATTTATTTATTTATTTATCAAG.................................................................251.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATAAG..............................................................291.000.001.00--------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATAAAA.................................................................241.000.00--1.00------------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTCCG............................................................291.000.00---1.00-----------------------
.............................................................................................................................................................................TTATTTATTTATTTATTTATTTAACAGGGCC..............................................311.000.00-1.00-------------------------
..............GTAGGATCAGAAGGGAAAGCTCTC....................................................................................................................................................................................................................2411.001.00-------------------1.00-------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTTCAG........................................................331.000.00--1.00------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTCGAG...................................................................241.000.00------1.00--------------------
.................................................................................................................................................................CTATTTATTTATTTACCTG......................................................................191.000.001.00--------------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTGATG...............................................................271.000.00----1.00----------------------
..............................................................................................................................................................................................................................AGAGAGATATGCGGGCAATTC.......2111.001.00-------1.00-------------------
................................................................................................................................................................TCTATTTATTTATTTATTTATTTCTAG...............................................................271.000.00-----1.00---------------------
.................................................................................................................................................................CTATTTATTTATTTATTTATTTATTTATTCTTG........................................................331.000.001.00--------------------------
...............................................................................................................................................................ATCTATTTATTTATTTATTTATTTATTTCTAG...........................................................321.000.001.00--------------------------
......................................................................................................................................................................TATTTATTTATTTATTTATTTATTTATTTAACA...................................................3370.860.860.140.71-------------------------
.....................................................................................................................................................................TTATTTATTTATTTATTTATTTATTTATTTAACAA..................................................3570.572.57-0.290.140.14-----------------------
................................................................................................................................................................................................................................AGAGATATGCGGGCA...........1520.500.50--------------------------0.50
.........................................................................................................................................................................TTATTTATTTATTTATTTATTTATTTAACAA..................................................3180.501.880.120.120.120.12-----------------------
.......................................................................................................................................................................ATTTATTTATTTATTTATTTATTTATTTAACA...................................................3270.430.430.140.14-0.14-----------------------
..............................................................................................................................................................GATCTATTTATTTATTTATTTATTTATT................................................................2850.400.40----0.40----------------------
..........................................................................................................................................................................TATTTATTTATTTATTTATTTATTTAACAA..................................................3090.330.11-0.110.110.11-----------------------
...........................................................................................................................................................................ATTTATTTATTTATTTATTTATTTAACA...................................................2890.330.330.110.11-0.11-----------------------
...........................................................................................................................................................................ATTTATTTATTTATTTATTTATTTAACAA..................................................2990.220.33-0.110.11------------------------
....................................................................................................................................................................TTTATTTATTTATTTATTTATTTATTTATTTAACA...................................................3560.170.17---0.17-----------------------
........................................................................................................................................................................TTTATTTATTTATTTATTTATTTATTTAACA...................................................3170.140.14-0.14-------------------------
..........................................................................................................................................................................TATTTATTTATTTATTTATTTATTTAACA...................................................2990.110.110.11--------------------------

Antisense strand
TCTAAGCAATGTTAGTAGGATCAGAAGGGAAAGCTCTCTAAGGCACCCACTATTTGTTTTAGAAAATAATATTTTTTAATTCTGTTTATCCATTTTTAATATAGCTTACATTTTGTTAATTTCAAATTGAGTATAATCAGACCATATAGTCATTAATTGATCTATTTATTTATTTATTTATTTATTTATTTATTTAACAGAACAGAATATGGCAAAGAGACCAGAGAGATATGCGGGCAATTCAGCCTGA
...............................................................................................................................((((((............(((((((.....))).)))).............))))))..................................................................
............................................................................................................109............................................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................................................................................................................................GAGAGATATGCGGGCAG.......... 172.000.00-----------2.00---------------
......................................................................ATTTTTTAATTCTGTGCT.................................................................................................................................................................. 181.000.00-----1.00---------------------
.............................................................................................................................................................................................................................CCCGCATATCTCTCTG............. 1611.001.00----------------------1.00----
...............................................................................................................................................................................................................................GAGAGATATGCGGGCCCA......... 181.000.00-----------------------1.00---