ID: uc002tpg.1_intron_17_0_chr2_128522844_r.3p
GENE: (4)
chr2:128522794-128523043-


(1)
AGO1.ip 		(7)
B-CELL 		(1)
BRAIN 		(3)
BREAST 		(15)
CELL-LINE 		(4)
HEART 		(1)
HELA 		(6)
LIVER 		(4)
OTHER 		(23)
SKIN 		(2)
UTERUS 		(2)
XRN.ip

Sense strand
AACCAAAGGACTAGAGCTTTCCTTGCACAGTGTTAAGTTGTTTTCTGACAAAGTACTTCTGATAAAGCTGAGCTACATTTAAGTGAAAGTCAGTATCATTATTTAATGTCAGTTATTGCATGTTTTACAAATACCTTTAATATGTTTTTCAAAATTAGTGAAGTTGGAGGATGTATAACCTGTCTTTTTTTCTCCCTTAGTGGACTCCAGAAGGAAGACGCTTGGTCACTGGAGCTTCTAGTGGGGAGTT
..................................................................((..(((((((((..(((((.........)))))....))))).))))...))..(((.((((....((((((((......((((.......)))))))))))).)))).))).......................................................................
..............................................................63.......................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189784SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029129(GSM416758)
SW480. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................................................................................TAACCTGTCTTTTTTTCTCCCTTAG..................................................25133.0033.004.00-2.003.00---2.003.001.00--2.00-2.002.001.001.00---2.001.00------------1.00----------1.00----1.00--1.001.00-1.00-1.00------
...............................................................................................................................................................................TAACCTGTCTTTTTTTCTCCCTTAGAA................................................27111.0033.006.00----------1.00-----------1.00--------------------------1.00-----1.00---1.00-----
...............................................................................................................................................................................TAACCTGTCTTTTTTTCTCCCTTAGA.................................................2618.0033.004.00-----------------------1.00-------1.00-----------1.00-------------1.00-------
..............................................................................................................................................................................ATAACCTGTCTTTTTTTCTCCCTTAG..................................................2615.005.00--1.00------1.00------1.001.00------------------------1.00-----------------------
..........................................................................................................................................................................................................................CGCTTGGTCACTGGAGC...............1714.004.00----3.00------------------------------------------1.00------------------
....................................................................................................................................................................TGGAGGATGTATAACCTGTCTTTTTTTCTC........................................................3014.004.00-----4.00------------------------------------------------------------
..............................................................................................................................................................................ATAACCTGTCTTTTTTTCTCCCTTA...................................................2513.003.002.00-1.00---------------------------------------------------------------
.......................................................................................................................................................................................................GTGGACTCCAGAAGGAAGACGCT............................2313.003.00-1.00-----------------2.00----------------------------------------------
...............................................................................................................................................................................TAACCTGTCTTTTTTTCTCCCTTAGAG................................................2713.0033.003.00-----------------------------------------------------------------
.......................................................................................................................................................................................................GTGGACTCCAGAAGGAAGACG..............................2112.002.00---1.00---------------------1.00----------------------------------------
..................................................................................................................................................................................................................AAGGAAGACGCTTGGTCACTGG..................2212.002.00------1.00-----------------------1.00-----------------------------------
.......................................................................................................................................................................AGGATGTATAACCTGTCTTTTTTTCTCCCTTAG..................................................3312.002.00-------------------------------------1.00--------------1.00-------------
...................................................................................................................................................................................................................AGGAAGACGCTTGGTCACTGG..................2112.002.00-------------2.00----------------------------------------------------
...............................................................................................................................................................................TAACCTGTCTTTTTTTCTCCCTTA...................................................2412.002.00------------------------1.00-----------------------1.00-----------------
..................................................................................................................................................................................................................AAGGAAGACGCTTGGTCACT....................2012.002.00----------2.00-------------------------------------------------------
..........................................................................................................................................................................................................................CGCTTGGTCACTGGAGCTTC............2012.002.00----2.00-------------------------------------------------------------
.............................................................................................................................................................................TATAACCTGTCTTTTTTTCTCCCTTAG..................................................2712.002.00---------1.00------------------1.00-------------------------------------
........................................................................................................................................................................................................TGGACTCCAGAAGGAAGACG..............................2012.002.00-------1.00----------------------------1.00-----------------------------
.......................................................................................................................................................................................................GTGGACTCCAGAAGGAAGACGCTT...........................2412.002.00------1.00------------------------------------------1.00----------------
........................................................................................................................................................................................................TGGACTCCAGAAGGAAGA................................1812.002.00---1.00------1.00-------------------------------------------------------
..............................................................................................................................................................TGAAGTTGGAGGATGTATAG........................................................................201.000.00------------------1.00-----------------------------------------------
......................................................................................................................................................................................................AGTGGACTCCAGAAGGAAGACGCT............................2411.001.00---------------------------------1.00--------------------------------
..........................................................................................................................................................................ATGTATAACCTGTCTTTTTTTCTCCCTTA...................................................2911.001.00-----------1.00------------------------------------------------------
...............................................................................................................................................................................TAACCTGTCTTTTTTTCTCCCTTAGG.................................................2611.0033.001.00-----------------------------------------------------------------
...................................................................CTGAGCTACATTTAAAATA....................................................................................................................................................................191.000.00-------------------------1.00----------------------------------------
................................................................................................................................................................................................................AGAAGGAAGACGCTTGGG........................181.000.00-----------------------------1.00------------------------------------
.....................................................................................................................................................................................................................................TGGAGCTTCTAGTGGGG....1711.001.00-----------------------------------------------------1.00------------
................................................................................................................................................................................................................AGAAGGAAGACGCTTGGTCACT....................2211.001.00-1.00----------------------------------------------------------------
........................................................................................................................................................................................................TGGACTCCAGAAGGAAGACGCT............................2211.001.00-----------------------1.00------------------------------------------
.........................................................................................................................................................................................................GGACTCCAGAAGGAAGACGCT............................2111.001.00-1.00----------------------------------------------------------------
..................................................................................................................................................................................................................................CACTGGAGCTTCTAGTGGGGAG..2211.001.00-------------------------------------------------------------1.00----
......................................................................................................................................................................................................................AAGACGCTTGGTCACTGGAGCTTC............2411.001.00--------------------1.00---------------------------------------------
...................................................................................................................................................................................................................AGGAAGACGCTTGGTCACTGGAGCCTC............271.000.00--------------------1.00---------------------------------------------
.........................................................TCTGATAAAGCTGAGGTC...............................................................................................................................................................................181.000.00----------------------1.00-------------------------------------------
.......................................................................................................................................................................................CTTTTTTTCTCCCTTAGA.................................................181.000.00----------------------------------1.00-------------------------------
............................................................................................................................................................................GTATAACCTGTCTTTTTTTCTCCCTTAGAAA...............................................311.000.00-----------1.00------------------------------------------------------
.........................................................................................................................................................................................................................ACGCTTGGTCACTGGAGCTTCTAGTGGGGAGC.321.000.00-------------------------------------------1.00----------------------
.......................................................................................................................................................................................................GTGGACTCCAGAAGGAAGA................................1911.001.00------1.00-----------------------------------------------------------
.................................................................................................................................................................................................CCCTTAGTGGACTCCAGAAGGAAGACG..............................2711.001.00-1.00----------------------------------------------------------------
..............................................................................................................................................................TGAAGTTGGAGGATGTATTGT.......................................................................211.000.00------------------1.00-----------------------------------------------
........................................................................................................................................................................................................TGGACTCCAGAAGGAAGACGCTAGG.........................2511.001.00-------1.00----------------------------------------------------------
...............................................................................................................................................................................................................CAGAAGGAAGACGCTTGGTCA......................2111.001.00---------------------------------------------1.00--------------------
...................................................................................................................................................................................................................AGGAAGACGCTTGGTCACTGGA.................2211.001.00------1.00-----------------------------------------------------------
......................................................................................................................................................................................................AGTGGACTCCAGAAGGAAGA................................2011.001.00----------------------------------------1.00-------------------------
.......................................................................................................................................................................................................GTGGACTCCAGAAGGAAGACGCTTGG.........................2611.001.00-1.00----------------------------------------------------------------
...............................................................................................................................................................................TAACCTGTCTTTTTTTCTCCCTTAGAAA...............................................2811.0033.001.00-----------------------------------------------------------------
...................................................................................................................................................................................................................AGGAAGACGCTTGGTCACTGGAG................2311.001.00-1.00----------------------------------------------------------------
........................................................................................................................................................AATTAGTGAAGTTGGAGGAT..............................................................................2011.001.00---------------------------------------1.00--------------------------
..............................................................................................................................................................................ATAACCTGTCTTTTTTTCTCCCTTATAA................................................2811.003.00--1.00---------------------------------------------------------------
..................................................................................................................................................................GTTGGAGGATGTATAACCTGTC..................................................................2211.001.00--------------------------------------1.00---------------------------
.................................................................................................................................................................................................................GAAGGAAGACGCTTGGTC.......................1811.001.00---------------------------1.00--------------------------------------
...................TCCTTGCACAGTGTTAAG.....................................................................................................................................................................................................................1820.500.50---------------------------------------------------------------0.50--
...............................................................AAAGCTGAGCTACATTT..........................................................................................................................................................................1730.330.33--------------------------0.33---------------------------------------
..........CTAGAGCTTTCCTTGC................................................................................................................................................................................................................................1630.330.33----------------------------------------------------------------0.33-
......AGGACTAGAGCTTTC.....................................................................................................................................................................................................................................1560.170.17-----------------------------------------------------------------0.17

Antisense strand
AACCAAAGGACTAGAGCTTTCCTTGCACAGTGTTAAGTTGTTTTCTGACAAAGTACTTCTGATAAAGCTGAGCTACATTTAAGTGAAAGTCAGTATCATTATTTAATGTCAGTTATTGCATGTTTTACAAATACCTTTAATATGTTTTTCAAAATTAGTGAAGTTGGAGGATGTATAACCTGTCTTTTTTTCTCCCTTAGTGGACTCCAGAAGGAAGACGCTTGGTCACTGGAGCTTCTAGTGGGGAGTT
..................................................................((..(((((((((..(((((.........)))))....))))).))))...))..(((.((((....((((((((......((((.......)))))))))))).)))).))).......................................................................
..............................................................63.......................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189784SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029129(GSM416758)
SW480. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................................................................................................................................................................................................GGAGCTTCTAGTGGGGAAG. 191.000.00-----------------------------------------1.00------------------------
...............................................................................................................................................................GAAGTTGGAGGATGTGG.......................................................................... 171.000.00--------------------------1.00---------------------------------------
....................................................................................................................................................................................................................................CTGGAGCTTCTAGTGGGCTT.. 201.000.00-------------------------------1.00----------------------------------
...............................................................................................................................................GTTTTTCAAAATTAGTGCTA....................................................................................... 201.000.00--------------------------------------------------------------1.00---