ID: uc002ton.2_intron_9_0_chr2_128260449_r.3p
GENE: IWS1(4)
chr2:128260399-128260648-


(1)
AGO2.ip 		(1)
B-CELL 		(3)
BRAIN 		(1)
BREAST 		(16)
CELL-LINE 		(1)
FIBROBLAST 		(2)
HEART 		(1)
HELA 		(3)
LIVER 		(1)
OTHER 		(8)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GCCATGAGAGGACTTTCTGGGGAGGCTACATGAGTGTATAGGGTGCTGGTTACATGAGTGTATATATTTGTTAAAACTCATTGAACTGAACACTGAAGATCTGCACATTTTACTGTACATAAATTCTATTTTTTAAAAAATGGTTCCTATGCAAATGAGGATAAAGCAAATGAATGTTTTTACATTTGTCTACTTTCTAGAAATCTTATTGCAGACATATTTGGAGAATCTGGTGATGAAGAGGAAGAAG
......................................................................................................................................................(((((((.....((((((......))))))..))))))).............................................................
.................................................................................................................................................146...................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037943(GSM510481)
293DcrTN. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)
......................................................................................................................................................GCAAATGAGGATAAACTGG.................................................................................19127.000.0036.0023.0018.008.0012.0012.008.007.00--------------1.001.00-----1.00--------
................................................................................................................................................................................TTTTTACATTTGTCTACTTTCTAGA.................................................2517.007.00--------4.003.00----------------------------
......................................................................................................................................................GCAAATGAGGATAAACGGG.................................................................................193.000.00-1.00-1.001.00---------------------------------
......................................................................................................................................................GCAAATGAGGATAAACAGG.................................................................................192.000.001.00----1.00--------------------------------
......................................................................................................................................................GCAAATGAGGATAAACTAG.................................................................................192.000.00---2.00----------------------------------
......................................................................................................................................................GCAAATGAGGATAAACTGT.................................................................................192.000.00---2.00----------------------------------
................................................................................................................................................................................TTTTTACATTTGTCTACTTTCTAG..................................................2412.002.00---------1.00-----------------1.00----------
......................................................................................................................................................GCAAATGAGGATAAACAAG.................................................................................192.000.00---2.00----------------------------------
......................................................................................................................................................GCAAATGAGGATAAACTGC.................................................................................192.000.001.001.00------------------------------------
......................................................................................................................................................GCAAATGAGGATAAACCGG.................................................................................192.000.00-1.00--1.00---------------------------------
.............................................................................................................................................................................................................................TGGAGAATCTGGTGATGAAGAGGAAG...2611.001.00--------------------------1.00-----------
..........................................................................................CACTGAAGATCTGCACATTTT...........................................................................................................................................2111.001.00--------------1.00-----------------------
...........................................................................................................................................................................................................................TTTGGAGAATCTGGTGATGAAGAGG......2511.001.00----------1.00---------------------------
................................................................................TTGAACTGAACACTGAAGATC.....................................................................................................................................................2111.001.00----------1.00---------------------------
.........................................................................................................................................................................................................................TATTTGGAGAATCTGGTGAT.............2011.001.00-------------------1.00------------------
......................................................................................................................................................GCAAATGAGGATAAATACA.................................................................................191.000.00---1.00----------------------------------
......................................................................................................................................................GCAAATGAGGATAAACGGC.................................................................................191.000.00-1.00------------------------------------
............................................................................CTCATTGAACTGAACACTGAAGATC.....................................................................................................................................................2511.001.00----------------------------------1.00---
..................................................................................GAACTGAACACTGAAGTGG.....................................................................................................................................................191.000.00----------------1.00---------------------
....................................................................................ACTGAACACTGAAGATC.....................................................................................................................................................1711.001.00--------------------1.00-----------------
......................................................................................................................................................GCAAATGAGGATAAACCCG.................................................................................191.000.00------1.00-------------------------------
....................................................................................................................................................................................................................AGACATATTTGGAGAATCTGGTGATGAAGAGG......3211.001.00-------------1.00------------------------
..............................................................................................GAAGATCTGCACATTTTACTGTACA...................................................................................................................................2511.001.00-----------1.00--------------------------
......................................................................................................................................................GCAAATGAGGATAAACTG..................................................................................181.000.00-----1.00--------------------------------
......................................................................................................................................................................................................................................TGGTGATGAAGAGGAAGAA.1911.001.00---------------------1.00----------------
.....................................................................................CTGAACACTGAAGATCTGCA.................................................................................................................................................2011.001.00------------1.00-------------------------
..............................................................................................................................................................................................................................GGAGAATCTGGTGATGAAGAGGA.....2311.001.00--------1.00-----------------------------
..........................................................................................................................................................................................................................ATTTGGAGAATCTGGTGATGAAGAGGAA....2811.001.00----------------------------1.00---------
....................................................................................ACTGAACACTGAAGATCTGCA.................................................................................................................................................2111.001.00-------------------------------1.00------
......................................................................................................................................................................................................................ACATATTTGGAGAATCTG..................1811.001.00-----------1.00--------------------------
...........................................................................................................TTTTACTGTACATAAAATTG...........................................................................................................................201.000.00---------------1.00----------------------
........................................................................AAAACTCATTGAACTCTG................................................................................................................................................................181.000.00------------------1.00-------------------
......................................................................................................................................................GCAAATGAGGATAAACTCC.................................................................................191.000.00---1.00----------------------------------
.......................................................................................GAACACTGAAGATCTGCACATTTTACT........................................................................................................................................2711.001.00------------1.00-------------------------
.........................................................................................................................AATTCTATTTTTTAACG................................................................................................................171.000.00------------------------------1.00-------
......AGAGGACTTTCTGGGGAGGCCAC.............................................................................................................................................................................................................................231.000.00-------------------------1.00------------
...................................................................................AACTGAACACTGAAGATCTGC..................................................................................................................................................2111.001.00--------------------------------1.00-----
......................................................................................................................................................................................CATTTGTCTACTTTCTAG..................................................1811.001.00------------------------1.00-------------
...............................................................................ATTGAACTGAACACTGAAGATCTGCA.................................................................................................................................................2611.001.00----------1.00---------------------------
................................................................................TTGAACTGAACACTGAAGATCTGCACA...............................................................................................................................................2711.001.00----------1.00---------------------------
.......GAGGACTTTCTGGGGAGGCTA..............................................................................................................................................................................................................................2111.001.00-----------------1.00--------------------
..........................................................................................................................................................................................................................ATTTGGAGAATCTGGTGATG............2011.001.00-----------1.00--------------------------
......................................................................................................................................................................................................................................TGGTGATGAAGAGGAAGAAGTA221.000.00---------------------------------1.00----
...................................................................................AACTGAACACTGAAGAT......................................................................................................................................................1720.500.50-----------0.50--------------------------
......................................................................................................................................................................................................................................TGGTGATGAAGAGGAAGA..1820.500.50-----------------------------------0.50--
......................................................................................TGAACACTGAAGATCT....................................................................................................................................................1680.250.25-----------0.12-------------------------0.12
....................................................................................................................................................................................................................................TCTGGTGATGAAGAGG......1650.200.20------------------------------------0.20-

Antisense strand
GCCATGAGAGGACTTTCTGGGGAGGCTACATGAGTGTATAGGGTGCTGGTTACATGAGTGTATATATTTGTTAAAACTCATTGAACTGAACACTGAAGATCTGCACATTTTACTGTACATAAATTCTATTTTTTAAAAAATGGTTCCTATGCAAATGAGGATAAAGCAAATGAATGTTTTTACATTTGTCTACTTTCTAGAAATCTTATTGCAGACATATTTGGAGAATCTGGTGATGAAGAGGAAGAAG
......................................................................................................................................................(((((((.....((((((......))))))..))))))).............................................................
.................................................................................................................................................146...................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037943(GSM510481)
293DcrTN. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)