ID: uc002swv.2_intron_7_0_chr2_97403805_r.3p
GENE: (1)
chr2:97403755-97404004-


(1)
AGO2.ip 		(1)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(10)
CELL-LINE 		(2)
CERVIX 		(1)
HEART 		(7)
HELA 		(4)
LIVER 		(2)
OTHER 		(17)
SKIN 		(1)
TESTES

Sense strand
ATGTGCTTTGGGGTCCTTACCTGATAAAGGCCTTGTGAAAGCTGTAGAGATGGTAAGATTCATGACTGAGAGAAGATAGGAGATTGAGTGACATTAAAGGGGGAAAAAGATGATGGCTCAGCTTTCAGAGGCTCTGTGGTGGCTGCTTTCTGAATGGATTGGTGTTGAAAAGTATGAACTGATCTACTTCCTTCCTGTAGGTGTGGGCACAGGCAGTTCCTCACTGTGGAATCTGATGGGCAATGCCATG
..........................................................((((....)))).....((((((..((((......)))).(((((........((.(((..((((.(((.((...)).))).))))))).))....(((((..((..............))..)))))))))).))))))....................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM532874(GSM532874)
G699T. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040008(GSM532893)
G727N. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..................................................................................................................................GCTCTGTGGTGGCTGCTTTCTGAATGGATTGGTGTTGAAAAGTATGAACTGATCTACTTCCTTCCTGTAG..................................................7016.006.006.00---------------------------------------------------
.............................................................................................................................................................................ATGAACTGATCTACTTCCTTCCTGTAG..................................................2716.006.00-----1.00--1.00------1.001.00------------------1.00---1.00------------
.............................................................................................................................................................................ATGAACTGATCTACTTCCTT.........................................................2014.004.00----3.00--------------------------------------------1.00--
............................................................................................................................................................................TATGAACTGATCTACTTCCTTCCTGTAG..................................................2814.004.00-----1.00---1.00-------------------------------------1.001.00---
.............................................................................................................................................................................ATGAACTGATCTACTTCCTTCCTGTAGA.................................................2813.006.00--2.00---------------------------------1.00---------------
.......................................................................................................................................GTGGTGGCTGCTTTCTGAATGGATTGGTGTTGAAAAGTATGAACTGATCTACTTCCTTCCTGT....................................................6312.002.00-2.00--------------------------------------------------
...........................................................................................................................................................................GTATGAACTGATCTACTTCCTTC........................................................2312.002.00-------2.00--------------------------------------------
...................................................................................................................................................TTCTGAATGGATTGGTGTTGAAAAGTATGAACTGATCTACTTCCTTCCTGTAG..................................................5312.002.00-2.00--------------------------------------------------
..............................................................................................................................................................................................................................ACTGTGGAATCTGATGACA.........192.000.00--------------------1.00----------1.00--------------------
..................................................TGGTAAGATTCATGACTGAGAGAAGA..............................................................................................................................................................................2612.002.00--2.00-------------------------------------------------
......................................................................................................................................................................................TCTACTTCCTTCCTGTAGA.................................................192.000.00-----------------------1.00--1.00-------------------------
..................................................TGGTAAGATTCATGACTGAGA...................................................................................................................................................................................2112.002.00-----------1.00----------1.00-----------------------------
...........................................................................................................................................................................GTATGAACTGATCTACTTCCTTCCTGTAG..................................................2912.002.00------1.00-1.00-------------------------------------------
............................................................................................................................................GGCTGCTTTCTGAATGGATTGGTGTTGAAAAGTATGAACTGATCTACTTCCTTCCTGTAG..................................................6011.001.00------------1.00---------------------------------------
.................................................................................................................................................................................................................................GTGGAATCTGATGGGCAA.......1811.001.00----------------------------------1.00-----------------
...............................................................GACTGAGAGAAGATAGGAGAT......................................................................................................................................................................2111.001.00----------------------------------------1.00-----------
...........................................GTAGAGATGGTAAGATTCATGACTGAGAGAAGATAGGAGATTGAGTGACATTAAAGG......................................................................................................................................................5711.001.001.00---------------------------------------------------
.......................................................................GAAGATAGGAGATTGAGTGAC..............................................................................................................................................................2111.001.00---------------------------------------------1.00------
..............................................................................................................................................................................................................................ACTGTGGAATCTGATGAC..........181.000.00------------------------------------------1.00---------
...............................................................................................................................................................................................................................CTGTGGAATCTGATGACA.........181.000.00-------------------1.00--------------------------------
.......................ATAAAGGCCTTGTGAAAGCTGTAGAGACGG.....................................................................................................................................................................................................301.000.00---------------------------------1.00------------------
.............................................................ATGACTGAGAGAAGATAGGAGATTGAG..................................................................................................................................................................2711.001.00-----------------------------------------1.00----------
......................................................AAGATTCATGACTGAGAGAAGATA............................................................................................................................................................................2411.001.00---1.00------------------------------------------------
.......................................................................................................................................................GAATGGATTGGTGTTGAAAAGT.............................................................................2211.001.00--------------------------------------------1.00-------
.............................................................................................................................................................................................................................CACTGTGGAATCTGAAGAC..........191.000.00----------1.00-----------------------------------------
..............................................................TGACTGAGAGAAGATAGGAGATTG....................................................................................................................................................................2411.001.00----------1.00-----------------------------------------
.............................................................................................................................................................................................................................CACTGTGGAATCTGATGGGCAATGCCATG2911.001.00----------------------------------------------1.00-----
.............................................................................................................................................................................................................................CACTGTGGAATCTGAGGC...........181.000.00------------------------1.00---------------------------
............................................................................................................................................................................................................................TCACTGTGGAATCTGATGGGCAATG.....2511.001.00-------------------------1.00--------------------------
..............................................................TGACTGAGAGAAGATAGGAGATTGAGT.................................................................................................................................................................2711.001.00---1.00------------------------------------------------
...............................................................................................................................................................................................TTCCTGTAGGTGTGGGCACAG......................................2111.001.00-----------------------------1.00----------------------
...........................................................................................................................................TGGCTGCTTTCTGAATGGATTGGTGTTGAAAAGTATGAACTGATCTACTTCCTTCCTGTAG..................................................6111.001.00--------------------------------------1.00-------------
................................................................................................................................................................................................................................TGTGGAATCTGATGGGCAATGCC...2311.001.00-----------------1.00----------------------------------
.........................................................................................................................................GGTGGCTGCTTTCTGAATGG.............................................................................................2011.001.00------1.00---------------------------------------------
........................................................................................................................................................................................................................TTCCTCACTGTGGAATCTGATGGGC.........2511.001.00---1.00------------------------------------------------
....................................................................AGAGAAGATAGGAGAAACA...................................................................................................................................................................191.000.00---------------------------1.00------------------------
......................................................................................................................................................TGAATGGATTGGTGTGGAG.................................................................................191.000.00------------------------------1.00---------------------
...................................................................................................................................................TTCTGAATGGATTGGTG......................................................................................1711.001.00-------------1.00--------------------------------------
....................................................GTAAGATTCATGACTGAGAGAAGATAGG..........................................................................................................................................................................2811.001.00---------1.00------------------------------------------
......................GATAAAGGCCTTGTGAAAGCTGT.............................................................................................................................................................................................................2311.001.00---------------------1.00------------------------------
...........................................................................................................................................................................................................................CTCACTGTGGAATCTGAAG............191.000.00-------------------------------------1.00--------------
..................................................................................................................................................................................................................AGGCAGTTCCTCACTGTGGAA...................2111.001.00-------------------------------------------1.00--------
.......................................................................................................................................................................................CTACTTCCTTCCTGTAG..................................................1720.500.50--------------------------------------------------0.50-
................................................................................................................................................................................................................................TGTGGAATCTGATGG...........1570.140.14---------------------------------------------------0.14

Antisense strand
ATGTGCTTTGGGGTCCTTACCTGATAAAGGCCTTGTGAAAGCTGTAGAGATGGTAAGATTCATGACTGAGAGAAGATAGGAGATTGAGTGACATTAAAGGGGGAAAAAGATGATGGCTCAGCTTTCAGAGGCTCTGTGGTGGCTGCTTTCTGAATGGATTGGTGTTGAAAAGTATGAACTGATCTACTTCCTTCCTGTAGGTGTGGGCACAGGCAGTTCCTCACTGTGGAATCTGATGGGCAATGCCATG
..........................................................((((....)))).....((((((..((((......)))).(((((........((.(((..((((.(((.((...)).))).))))))).))....(((((..((..............))..)))))))))).))))))....................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM532874(GSM532874)
G699T. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040008(GSM532893)
G727N. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
.................................................................................................................................................................GTGTTGAAAAGTATGAG........................................................................ 171.000.00------------------1.00---------------------------------
........................................................................................................................AGAAAGCAGCCACCACAGAGCCTCTGAAAGC................................................................................................... 3111.001.00--------------1.00-------------------------------------
......................................................................................................................................TGTGGTGGCTGCTTTACAA................................................................................................. 191.000.00----------------------------1.00-----------------------
..............................................................................................................................AGAGGCTCTGTGGTGTCAC......................................................................................................... 191.000.00--------------------------------1.00-------------------