ID: uc002swd.2_intron_0_0_chr2_97193921_r.3p
GENE: (2)
chr2:97193871-97194120-


(2)
B-CELL 		(5)
BREAST 		(7)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(1)
LIVER 		(2)
OTHER 		(10)
SKIN 		(1)
UTERUS

Sense strand
GCCATTTGGTTCTGCAAGGCCCCCACCCCCTTGCCTTCCCTCCTTCTGTACGTGTGTGTCATATTTTGTTGGCTTTGGGGCTTTCTTTTCTTTCTTTCTTTTCTTTTTTTTTTTAAATAAACAAGGGCTGCATGAAACCCCTAATATTCTGGGTAAGTGTTGAAACAGCTCAGAAATCCCCTCCTCCCCTTGTGACTCAGTGGCAGGAGCGATAAGCAGAACTACTGGTGACACTGTGGGAGAGAAATTC
.........................................................((((........)))).................................................................................................................................................................................
........................................................57...............................................................122..............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR189786SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTCTG.....................................................................................................................................2818.000.00-7.007.002.002.00----------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTCCAG....................................................................................................................................2513.000.00-5.007.00-1.00----------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTATG..........................................................................................................................................277.000.00--4.003.00-----------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTACG.....................................................................................................................................246.000.00-2.002.00-2.00----------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTAAAG.........................................................................................................................................295.000.00-2.001.001.001.00----------------------------
.............................................................TATTTTGTTGGCTTTCGGA..........................................................................................................................................................................195.000.00-------1.00------1.00---1.00--1.00-1.00---------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTCAG.....................................................................................................................................254.000.00--1.002.001.00----------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTCCAT....................................................................................................................................254.000.00-2.001.001.00-----------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTACAG....................................................................................................................................284.000.00-3.00--1.00----------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTCCAG....................................................................................................................................293.000.00-1.001.00-1.00----------------------------
.............................................................TATTTTGTTGGCTTTCGG...........................................................................................................................................................................183.000.00-------1.001.00--------1.00---------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTTTTAG......................................................................................................................................313.000.00-1.00-2.00-----------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTTTTTGG............................................................................................................................................273.000.003.00--------------------------------
..................................................................................................................................................................................................................................GGTGACACTGTGGGAGAGTAG...213.000.00---------2.00--1.00--------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTAATAG...................................................................................................................................273.000.00-1.00--2.00----------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTCTAG....................................................................................................................................253.000.00-1.002.00------------------------------
.............................................................TATTTTGTTGGCTTTCG............................................................................................................................................................................172.000.00-----------1.00----1.00----------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTCCAA....................................................................................................................................252.000.00--2.00------------------------------
...........................................................................................TTCTTTCTTTTCTTTTTTTTTTTACAG....................................................................................................................................272.000.00--1.00-1.00----------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTTTTGC......................................................................................................................................282.000.001.00----1.00---------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTAAAAAAG.................................................................................................................................282.000.00-1.00----1.00--------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTTTTGCG.....................................................................................................................................292.000.001.00----1.00---------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTTTATG......................................................................................................................................312.000.00--2.00------------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTGTG.......................................................................................................................................252.000.00-----2.00---------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTAGTC...........................................................................................................................................222.000.00-----2.00---------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTAATTTG..................................................................................................................................312.000.00--2.00------------------------------
...........................................................................................TTCTTTCTTTTCTTTTTTTTTTTAATTG...................................................................................................................................282.000.00----2.00----------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTCTCG.......................................................................................................................................292.000.00---2.00-----------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTGGG........................................................................................................................................282.000.002.00--------------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTTTTTTTG...........................................................................................................................................282.000.001.001.00-------------------------------
...............................................................................................TTCTTTTCTTTTTTTTTTTACTTG...................................................................................................................................242.000.002.00--------------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTCCG........................................................................................................................................252.000.00-1.00--1.00----------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTCAG.....................................................................................................................................272.000.00-1.00--1.00----------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTTCCG.......................................................................................................................................302.000.00----2.00----------------------------
................................................................................CTTTCTTTTCTTTCTTTCTTTTCTTTCATG............................................................................................................................................302.000.00--2.00------------------------------
.................................................................................................CTTTTCTTTTTTTTTTTAAATCAAA................................................................................................................................252.000.00-1.001.00------------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTAAC.........................................................................................................................................281.000.00-----1.00---------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTTCG........................................................................................................................................291.000.00----1.00----------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTCTG........................................................................................................................................271.000.00----1.00----------------------------
..................................................................................TTCTTTTCTTTCTTTCTTAGC...................................................................................................................................................211.000.001.00--------------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTCAG...........................................................................................................................................261.000.00---1.00-----------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTTTAG......................................................................................................................................301.000.00---1.00-----------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTAA...........................................................................................................................................271.000.00--1.00------------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTCCCC.......................................................................................................................................261.000.001.00--------------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTTTTAG........................................................................................................................................301.000.00---1.00-----------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTTTTTTTTTTTCG......................................................................................................................................331.000.00--1.00------------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTCAG.....................................................................................................................................281.000.00-1.00-------------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTTTCCG........................................................................................................................................301.000.00---1.00-----------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTCCC.....................................................................................................................................271.000.001.00--------------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTATG.....................................................................................................................................241.000.00-1.00-------------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTAATG........................................................................................................................................261.000.00------1.00--------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTTTTCCG.......................................................................................................................................311.000.00---1.00-----------------------------
......................................................................................................CTTTTTTTTTTTAAATAACAAG..............................................................................................................................221.000.00-1.00-------------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTTCAG.......................................................................................................................................301.000.00--1.00------------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTAACG....................................................................................................................................251.000.00----1.00----------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTCTG........................................................................................................................................261.000.001.00--------------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTATT........................................................................................................................................291.000.00------1.00--------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTGGTC.............................................................................................................................................241.000.00-------------------------1.00-------
.................................................................................TTTCTTTTCTTTCTTTCTTTTCTTTCGC.............................................................................................................................................281.000.001.00--------------------------------
..................................................................................TTCTTTTCTTTCTTTCTTTTCTTTTTTTTGC.........................................................................................................................................311.000.001.00--------------------------------
..............................................................................................................................................................................................................GAGCGATAAGCAGAACTACTGGTGA...................2511.001.00-------------------1.00-------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTTTAG.......................................................................................................................................301.000.00-1.00-------------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTCGG.....................................................................................................................................271.000.001.00--------------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTTTTCTG............................................................................................................................................271.000.001.00--------------------------------
...............................................................................................................................................................................................................AGCGATAAGCAGAACTACTGG......................2111.001.00--------1.00------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTTTTCAG.....................................................................................................................................301.000.00-1.00-------------------------------
...............................................................................................................................................................................................................AGCGATAAGCAGAACTACTGGTGA...................2411.001.00--------------------1.00------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTCATG....................................................................................................................................251.000.00-1.00-------------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTAGTT........................................................................................................................................261.000.001.00--------------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTCTGG....................................................................................................................................291.000.001.00--------------------------------
...........................................................................................TTCTTTCTTTTCTTTTTTTTTTTAATTC...................................................................................................................................281.000.00--1.00------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTAATA............................................................................................................................................241.000.00----1.00----------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTCGTC....................................................................................................................................261.000.001.00--------------------------------
.................................................................................TTTCTTTTCTTTCTTTCTTTTCTTCTCT.............................................................................................................................................281.000.00-----1.00---------------------------
...............................................................TTTTGTTGGCTTTGGTTG.........................................................................................................................................................................181.000.00------1.00--------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTTTTCG........................................................................................................................................301.000.00---1.00-----------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTACG...........................................................................................................................................221.000.00---1.00-----------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTAAG............................................................................................................................................231.000.00--1.00------------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTCAAG.......................................................................................................................................251.000.00---1.00-----------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTCAGC....................................................................................................................................251.000.001.00--------------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTTTGAGC.....................................................................................................................................291.000.00-----1.00---------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTATCAG...................................................................................................................................291.000.00----1.00----------------------------
..............................................................................................................................................................................................................GAGCGATAAGCAGAACTACTG.......................2111.001.00--------------------------1.00------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTATTAG...................................................................................................................................271.000.00---1.00-----------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTTTTAG......................................................................................................................................281.000.00--1.00------------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTTGAAG......................................................................................................................................281.000.001.00--------------------------------
.................................................................................TTTCTTTTCTTTCTTTCTTTTCTTTTTTTCG..........................................................................................................................................311.000.00---1.00-----------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTATG.....................................................................................................................................271.000.00-1.00-------------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTCAGT....................................................................................................................................261.000.001.00--------------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTATACC...................................................................................................................................291.000.001.00--------------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTAAAG.......................................................................................................................................261.000.00----1.00----------------------------
......................................................................................................CTTTTTTTTTTTAAATAACCCG..............................................................................................................................221.000.00--1.00------------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTTAATG......................................................................................................................................291.000.00----1.00----------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTAAAG..............................................................................................................................................241.000.00---1.00-----------------------------
..............................................................ATTTTGTTGGCTTTGCAG..........................................................................................................................................................................181.000.00-----1.00---------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTGC...........................................................................................................................................231.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTTGGG......................................................................................................................................301.000.001.00--------------------------------
...................................................................................................TTTCTTTTTTTTTTTAAATACTAG...............................................................................................................................241.000.00-1.00-------------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTGC......................................................................................................................................271.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTCGTT........................................................................................................................................281.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTACG.......................................................................................................................................291.000.00----1.00----------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTTTTTTTTTTTGC......................................................................................................................................331.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTGTC........................................................................................................................................281.000.00-----1.00---------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTTCTTG........................................................................................................................................301.000.00----1.00----------------------------
..................................................................................TTCTTTTCTTTCTTTCTAAAG...................................................................................................................................................211.000.00---1.00-----------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTGGGA......................................................................................................................................301.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTTTCAG.....................................................................................................................................311.000.00---1.00-----------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTCGGC....................................................................................................................................261.000.001.00--------------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTCTGG.......................................................................................................................................251.000.001.00--------------------------------
................................................................................................TCTTTTCTTTTTTTTTTTACATG...................................................................................................................................231.000.00-1.00-------------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTAAAGCT..................................................................................................................................281.000.00------1.00--------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTACAG....................................................................................................................................251.000.00------1.00--------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTATG...............................................................................................................................................241.000.00----1.00----------------------------
..................................................................................TTCTTTTCTTTCTTTCTTTTCTTTTTTTG...........................................................................................................................................291.000.00----1.00----------------------------
.....................................................................................................TCTTTTTTTTTTTAAATAAACTAG.............................................................................................................................241.000.00-1.00-------------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTCCC.........................................................................................................................................281.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTTAACA.....................................................................................................................................311.000.00----1.00----------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTTTTAAC.....................................................................................................................................321.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTAT........................................................................................................................................281.000.00-1.00-------------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTCAAG....................................................................................................................................261.000.00-1.00-------------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTGGGA......................................................................................................................................261.000.001.00--------------------------------
..........................CCCCTTGCCTTCCCTTTCG.............................................................................................................................................................................................................191.000.00----------1.00----------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTACG.......................................................................................................................................261.000.00-1.00-------------------------------
...............................................................................................TTCTTTTCTTTTTTTTTTTAAATTTG.................................................................................................................................261.000.00--1.00------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTTTCTTG....................................................................................................................................321.000.00---1.00-----------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTAGG.....................................................................................................................................251.000.00-1.00-------------------------------
..............................................................................................TTTCTTTTCTTTTTTTTTTTAAATTTG.................................................................................................................................271.000.00--1.00------------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTAACC...........................................................................................................................................261.000.001.00--------------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTACC.....................................................................................................................................251.000.001.00--------------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTAAATG...................................................................................................................................271.000.00------1.00--------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTTTCCA.....................................................................................................................................251.000.001.00--------------------------------
..................................................................................................TTTTCTTTTTTTTTTTAAATACTAG...............................................................................................................................251.000.00-1.00-------------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTAAATAAACAG..............................................................................................................................311.000.00---1.00-----------------------------
.................................................................................TTTCTTTTCTTTCTTTCTTTTGGC.................................................................................................................................................241.000.00-----1.00---------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTAG............................................................................................................................................251.000.00-----1.00---------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTCAT........................................................................................................................................261.000.00-----1.00---------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTGGTG.......................................................................................................................................301.000.001.00--------------------------------
............................................................................................TCTTTCTTTTCTTTTTTTTTGGTC......................................................................................................................................241.000.001.00--------------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTCTG...........................................................................................................................................271.000.001.00--------------------------------
.........................................................................TTTGGGGCTTTCTTTTCTGTTG...........................................................................................................................................................221.000.00------------------------1.00--------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTTTGGTC.....................................................................................................................................301.000.001.00--------------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTAACG........................................................................................................................................251.000.00----1.00----------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTCTTG.......................................................................................................................................291.000.00---1.00-----------------------------
..................................................................................TTCTTTTCTTTCTTTCTTTTCTTTTTTTTCAG........................................................................................................................................321.000.00-----1.00---------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTAAATCTAG................................................................................................................................291.000.00----1.00----------------------------
......................................................................................................CTTTTTTTTTTTAAATAAACA...............................................................................................................................2161.001.00-0.330.67------------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTTGGGT......................................................................................................................................291.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTAAG.......................................................................................................................................291.000.00---1.00-----------------------------
................................................................................................TCTTTTCTTTTTTTTTTTACACC...................................................................................................................................231.000.00-----1.00---------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTCTTG........................................................................................................................................251.000.001.00--------------------------------
.................................................................................................CTTTTCTTTTTTTTTTTACG.....................................................................................................................................201.000.00-1.00-------------------------------
......................................................................................................CTTTTTTTTTTTAAATAAACCG..............................................................................................................................221.000.00----1.00----------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTCTCC....................................................................................................................................251.000.001.00--------------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTTTTAG......................................................................................................................................291.000.00---1.00-----------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTTTTAGAGG...................................................................................................................................321.000.001.00--------------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTCTTG........................................................................................................................................271.000.001.00--------------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTAGACG...................................................................................................................................261.000.001.00--------------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTTTAACC............................................................................................................................................271.000.001.00--------------------------------
................................................................................................TCTTTTCTTTTTTTTTTTAAATTCAA................................................................................................................................261.000.00-1.00-------------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTTTTCTAT....................................................................................................................................301.000.00----1.00----------------------------
.............................CTTGCCTTCCCTCCTTCTGTA........................................................................................................................................................................................................2111.001.00----------------------1.00----------
...................................................................................................................................................................................................................................GTGACACTGTGGGAGAGTAG...201.000.00-------------1.00-------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTAACTCG..................................................................................................................................271.000.00----1.00----------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTTTTCTG.....................................................................................................................................301.000.00----1.00----------------------------
...........................................................................TGGGGCTTTCTTTTCTTTTCTG.........................................................................................................................................................221.000.001.00--------------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTAAG............................................................................................................................................251.000.00----1.00----------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTTTTCTAG...........................................................................................................................................281.000.00---1.00-----------------------------
...........................................................................................TTCTTTCTTTTCTTTTTTTTTTTCCG.....................................................................................................................................261.000.00---1.00-----------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTACCG....................................................................................................................................251.000.00----1.00----------------------------
...................................................................................TCTTTTCTTTCTTTCTTTAAAG.................................................................................................................................................221.000.00---1.00-----------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTGGA..........................................................................................................................................241.000.001.00--------------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTAAATTT..................................................................................................................................271.000.00--1.00------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTCCTG.......................................................................................................................................291.000.00---1.00-----------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTCCAG.......................................................................................................................................251.000.00-----1.00---------------------------
.................................................................................TTTCTTTTCTTTCTTTCTTTTCTTTTTGGAG..........................................................................................................................................311.000.001.00--------------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTTTTTTAAG.....................................................................................................................................331.000.00---1.00-----------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTTGGC..............................................................................................................................................251.000.001.00--------------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTATTTG...................................................................................................................................291.000.00-1.00-------------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTGTTA...........................................................................................................................................231.000.00------1.00--------------------------
...........................................................................................TTCTTTCTTTTCTTTTTTTTTTTCCCG....................................................................................................................................271.000.00---1.00-----------------------------
...........................................................................................TTCTTTCTTTTCTTTTTTTTTTTCAT.....................................................................................................................................261.000.001.00--------------------------------
..................................................................................TTCTTTTCTTTCTTTCTTTTCTAG................................................................................................................................................241.000.00---1.00-----------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTTTCAAT....................................................................................................................................321.000.00------1.00--------------------------
........................................................................................TCTTTCTTTCTTTTCTTTGATG............................................................................................................................................221.000.001.00--------------------------------
........................................................................................TCTTTCTTTCTTTTCTTGGAG.............................................................................................................................................211.000.001.00--------------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTCCCC........................................................................................................................................261.000.001.00--------------------------------
..............................................................................................TTTCTTTTCTTTTTTTTTTTATGG....................................................................................................................................241.000.00-1.00-------------------------------
...........................................................................................TTCTTTCTTTTCTTTTTTTTTTTCAG.....................................................................................................................................261.000.00-1.00-------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTCGGA........................................................................................................................................281.000.001.00--------------------------------
.....................................................................................................TCTTTTTTTTTTTAAATAACAAG..............................................................................................................................231.000.00--1.00------------------------------
..................................................................................TTCTTTTCTTTCTTTCTTTTCTTTTTCG............................................................................................................................................281.000.00---1.00-----------------------------
...........................................................................................TTCTTTCTTTTCTTTTTTTTTTTCCCT....................................................................................................................................271.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTTTCG......................................................................................................................................301.000.00----1.00----------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTTTTATTTT...................................................................................................................................321.000.00-1.00-------------------------------
................................................................................CTTTCTTTTCTTTCTTTCTTTTCTTTTTTTTTTG........................................................................................................................................341.000.00---1.00-----------------------------
......................................................................................................CTTTTTTTTTTTAAATAAACGG..............................................................................................................................221.000.00--1.00------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTTTTAACG.....................................................................................................................................311.000.00---1.00-----------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTGGTA......................................................................................................................................261.000.001.00--------------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTAAG............................................................................................................................................241.000.00----1.00----------------------------
......................................................................................................CTTTTTTTTTTTAAATAATAAG..............................................................................................................................221.000.00--1.00------------------------------
...........................................................................TGGGGCTTTCTTTTCGC..............................................................................................................................................................171.000.00------1.00--------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTTTTTAG.......................................................................................................................................311.000.00----1.00----------------------------
...................................................................................TCTTTTCTTTCTTTCTTTTCTTTTTTTTTTGC.......................................................................................................................................321.000.001.00--------------------------------
.......................................................................................................................................................................................................................GCAGAACTACTGGTGACACTGT.............2211.001.00---------------------------1.00-----
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTATG............................................................................................................................................261.000.00-1.00-------------------------------
..................................................................................TTCTTTTCTTTCTTTCTTTTCTTCTAG.............................................................................................................................................271.000.00----1.00----------------------------
......................................................................................TTTCTTTCTTTCTTTTCTTTTTTTAATG........................................................................................................................................281.000.00--1.00------------------------------
....................................................................................CTTTTCTTTCTTTCTTTTCTTTTTTTTAG.........................................................................................................................................291.000.00---1.00-----------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTACTAT...................................................................................................................................261.000.00---1.00-----------------------------
.....................................................................................TTTTCTTTCTTTCTTTTCTTTTTTTTAAAG.......................................................................................................................................301.000.00--1.00------------------------------
.......................................................................................TTCTTTCTTTCTTTTCTTTTTTTTTTTGTG.....................................................................................................................................301.000.001.00--------------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTTTTGGAG....................................................................................................................................301.000.001.00--------------------------------
.............................................................................................CTTTCTTTTCTTTTTTTTTTTATTG....................................................................................................................................251.000.00---1.00-----------------------------
........................................................................................TCTTTCTTTCTTTTCTTTTTTTTTTTCAAG....................................................................................................................................301.000.00---1.00-----------------------------
..............................................................................................TTTCTTTTCTTTTTTTTTTTACTTG...................................................................................................................................251.000.00---1.00-----------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTATG.....................................................................................................................................2880.620.12-0.50-0.12-----------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTATTTG...................................................................................................................................3080.380.12-0.250.12------------------------------
...............................................................................GCTTTCTTTTCTTTCTTTCTTTTCT..................................................................................................................................................2530.330.33-----------------------------0.33---
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTAAA.....................................................................................................................................2740.250.25----0.25----------------------------
...........................................................................................................................AGGGCTGCATGAAACC...............................................................................................................1640.250.25------------------------------0.25--
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTACG.....................................................................................................................................2880.120.12----0.12----------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTATTTT...................................................................................................................................3080.120.12-0.12-------------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTAA......................................................................................................................................2680.120.12---0.12-----------------------------
..........................................................................................TTTCTTTCTTTTCTTTTTTTTTTTAACAG...................................................................................................................................2980.120.12--0.12------------------------------
.........................................................................................CTTTCTTTCTTTTCTTTTTTTTTTTA.......................................................................................................................................2680.120.12----0.12----------------------------

Antisense strand
GCCATTTGGTTCTGCAAGGCCCCCACCCCCTTGCCTTCCCTCCTTCTGTACGTGTGTGTCATATTTTGTTGGCTTTGGGGCTTTCTTTTCTTTCTTTCTTTTCTTTTTTTTTTTAAATAAACAAGGGCTGCATGAAACCCCTAATATTCTGGGTAAGTGTTGAAACAGCTCAGAAATCCCCTCCTCCCCTTGTGACTCAGTGGCAGGAGCGATAAGCAGAACTACTGGTGACACTGTGGGAGAGAAATTC
.........................................................((((........)))).................................................................................................................................................................................
........................................................57...............................................................122..............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR189786SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................................................CTCAGAAATCCCCTCCTCCGCTG........................................................... 231.000.00---------------1.00-----------------
.............................................................................GGGCTTTCTTTTCTTTCTTGA........................................................................................................................................................ 211.000.00----------------------------1.00----
.....................CCCACCCCCTTGCCTTCACT................................................................................................................................................................................................................. 201.000.00-----1.00---------------------------
................................CAGAAGGAGGGAAGGC.......................................................................................................................................................................................................... 1680.500.50----------0.25--------------------0.120.12