ID: uc002sva.1_intron_19_0_chr2_96578065_r
GENE: DKFZp667P0924(22)
chr2:96578015-96578204-


(2)
BREAST
(7)
CELL-LINE
(1)
LIVER
(2)
OTHER
(9)
SKIN

Sense strand
TGTATCCCTTTTGCTTTTCAGTGTCTTCTCGGAAAAAACCAGCCTTGAAGGTAATGAAACTCTCATTCATATTGTGAGCTAGTAAACGTAAAGCCTATGAAACATACCTTATTTATTATTTTGTTTCAAATTCCATTCAGGCTACAAGTGATGAGAAAGATTCTTTTTCGAATATAACCAGAGAAAAAAA
.............................................................(((((.......)))))...................(((((((.................)))))))..............................................................
............................................................61.....................................................................132........................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189782SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR029131(GSM416760)
MCF7. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................TTATTTATTATTTTGTGTTT..............................................................2016.000.0015.00---1.00-----------------
............................................................................................................TTATTTATTATTTTGTTTTTGT............................................................227.000.007.00---------------------
............................................................................................................TTATTTATTATTTTGTTCTTT.............................................................214.000.004.00---------------------
............................................................................................................TTATTTATTATTTTGTTTGGTT............................................................223.000.003.00---------------------
.........................................................................................................ACCTTATTTATTATTTCCAG.................................................................203.000.00-2.00---------1.00----------
............................................................................................................TTATTTATTATTTTGTTTGGT.............................................................212.000.002.00---------------------
............................................................................................................TTATTTATTATTTTGTTTGGTG............................................................222.000.002.00---------------------
.......................................................................................................................TTTGTTTCAAATTCCATTCAGT.................................................222.000.00--1.001.00------------------
............................................................................................................TTATTTATTATTTTGTTTTTAA............................................................222.000.002.00---------------------
............................................................................................................TTATTTATTATTTTGTGGTT..............................................................201.000.001.00---------------------
............................................................................................................TTATTTATTATTTTGTTTGTA.............................................................211.000.001.00---------------------
..........................TCTCGGAAAAAACCAGCCTTGAAGGC..........................................................................................................................................261.000.00-----1.00----------------
............................................................................................................TTATTTATTATTTTGTGCTT..............................................................201.000.001.00---------------------
............................................................................................................TTATTTATTATTTTGTTGTTA.............................................................211.000.001.00---------------------
............................................................................................................TTATTTATTATTTTGTGTGA..............................................................201.000.001.00---------------------
............................................................................................................TTATTTATTATTTTGTGTTA..............................................................201.000.001.00---------------------
........................................................................................................................TTGTTTCAAATTCCATTCAGTAA...............................................231.000.00---------1.00------------
............................................................................................................TTATTTATTATTTTGTTTGAAA............................................................221.000.001.00---------------------
........................................................................................................................TTGTTTCAAATTCCATTCAGTTT...............................................231.000.00-------1.00--------------
.........................................................................................................................TGTTTCAAATTCCATTCATA.................................................201.000.00--------1.00-------------
............................................................................................................TTATTTATTATTTTGTGCT...............................................................191.000.00----------1.00-----------
............................................................................................................TTATTTATTATTTTGTGGTG..............................................................201.000.001.00---------------------
............................................................................................................TTATTTATTATTTTGTTTGTTA............................................................221.000.001.00---------------------
........TTTTGCTTTTCAGTGTGTAT..................................................................................................................................................................201.000.00--1.00-------------------
............................................................................................................TTATTTATTATTTTGTTTAA..............................................................201.000.001.00---------------------
.........................TTCTCGGAAAAAACCAGCCTTGAAGGCT.........................................................................................................................................281.000.00------1.00---------------
.....................................................................................................................................................................TTTCGAATATAACCAGA........1750.600.60------------0.60---------
.................................................................TTCATATTGTGAGCTAGTA..........................................................................................................1940.500.50-------------0.50--------
..........................................................................................................................................AGGCTACAAGTGATGAGAAAGATT............................2470.430.43--------------0.43-------
...................AGTGTCTTCTCGGAAAAAACCAGCCTTGA..............................................................................................................................................2940.250.250.25---------------------
.................TCAGTGTCTTCTCGGAAAAAACCAGC...................................................................................................................................................2640.250.25---------------0.25------
..........................TCTCGGAAAAAACCAG....................................................................................................................................................1640.250.25----------------0.25-----
............................................................................................................TTATTTATTATTTTGTTTCAAATTCCATTCAG..................................................3280.250.25-----------------0.25----
.......................TCTTCTCGGAAAAAACC......................................................................................................................................................1750.200.200.20---------------------
............................TCGGAAAAAACCAGC...................................................................................................................................................1560.170.17------------------0.17---
.....................................................................................................................................CATTCAGGCTACAAGTGATGAGAAA................................2570.140.14--------------------0.14-
.......................................................................TTGTGAGCTAGTAAACGT.....................................................................................................1870.140.14-------------------0.14--
...............................................................................................................................................ACAAGTGATGAGAAAGATT............................1980.120.12---------------------0.12
....................GTGTCTTCTCGGAAA...........................................................................................................................................................1590.110.110.11---------------------

Antisense strand
TGTATCCCTTTTGCTTTTCAGTGTCTTCTCGGAAAAAACCAGCCTTGAAGGTAATGAAACTCTCATTCATATTGTGAGCTAGTAAACGTAAAGCCTATGAAACATACCTTATTTATTATTTTGTTTCAAATTCCATTCAGGCTACAAGTGATGAGAAAGATTCTTTTTCGAATATAACCAGAGAAAAAAA
.............................................................(((((.......)))))...................(((((((.................)))))))..............................................................
............................................................61.....................................................................132........................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189782SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR029131(GSM416760)
MCF7. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)