ID: uc002snu.3_intron_0_0_chr2_78245764_r.5p
GENE: (2)
chr2:78252253-78252502-


(1)
AGO2.ip 		(1)
BRAIN 		(15)
CELL-LINE 		(1)
HEART 		(1)
LIVER 		(2)
OTHER 		(1)
SKIN

Sense strand
GGGCTCAAGCAATCTTCCAAGCTCAGCCTCCCAAGTAGCTGGAACTACAGGTAGGTGCCACAATGTCCAGTTAATGTTTAATTTTTTTTTTTTTTTTTTTTTTTTTGCAGAGATGTGGTCTCACTTTGCTGCCCAGGCTGTCCTGTAACTCCTGGGCTCAAGACTCCTGGGCGCAAACAATCTTTTTACTTTGCCTCTCACAGTGGTGGGATTACAGGCATGGGCAACCATGCCCGGCCAAGTATTGTCT
..........................................................................................................((((....(((....)))....)))).((((....)))).........................................................................................................
........................................................................73.......................................................................146......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189787SRR189786SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM956925PAZD5SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTACTG.............................................................................................................................................3253.000.0026.0021.001.001.002.002.00-------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTACTG............................................................................................................................................3352.000.0022.0021.005.004.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTATTG............................................................................................................................................3310.000.003.007.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTATTT............................................................................................................................................339.000.004.004.001.00----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCTG...............................................................................................................................................309.000.003.006.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTATTT.............................................................................................................................................329.000.005.002.001.001.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTCCTG................................................................................................................................................298.000.004.002.002.00----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTATTG.............................................................................................................................................328.000.004.002.002.00----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTATT.............................................................................................................................................327.000.005.001.00--1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTACCG..............................................................................................................................................326.000.00-3.002.001.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCTT...............................................................................................................................................306.000.005.001.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTACGG............................................................................................................................................335.000.003.002.00-----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCAAG..............................................................................................................................................295.000.00--2.00-1.002.00-------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCCTG.............................................................................................................................................325.000.001.003.001.00----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCGG...............................................................................................................................................284.000.001.00---1.00-2.00------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTAT..............................................................................................................................................314.000.003.00-1.00----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTAT...............................................................................................................................................304.000.002.001.00---1.00-------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCG................................................................................................................................................283.000.00-2.00-1.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCTTG..............................................................................................................................................313.000.003.00------------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTTAT..............................................................................................................................................323.000.001.002.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTATAG.............................................................................................................................................323.000.002.00--1.00---------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTCAG....................................................................................................................................................263.000.001.001.00--1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTAT................................................................................................................................................303.000.002.00-1.00----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTACGG.............................................................................................................................................323.000.001.002.00-----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCCTT..............................................................................................................................................293.000.00-2.001.00----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTATG.............................................................................................................................................323.000.002.001.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTACCG............................................................................................................................................333.000.002.001.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTATG..............................................................................................................................................313.000.001.002.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTCTTG....................................................................................................................................................253.000.001.00-1.00-1.00--------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCTT..............................................................................................................................................313.000.001.002.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCTTG.............................................................................................................................................322.000.001.00-1.00----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTATTC.............................................................................................................................................332.000.00---1.00-1.00-------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCGAG..............................................................................................................................................302.000.00----1.00-1.00------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTCTTT...............................................................................................................................................302.000.00-1.001.00----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTCCCC.............................................................................................................................................332.000.001.001.00-----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTCCTG.................................................................................................................................................292.000.00--1.001.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTCAG................................................................................................................................................292.000.00--2.00----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTAATG............................................................................................................................................332.000.001.001.00-----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTTAATG............................................................................................................................................342.000.001.00-1.00----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTATAG............................................................................................................................................332.000.00-1.00-1.00---------------------
.............................................................................................TTTTTTTTTTTTTGCAGAGAGGC......................................................................................................................................232.000.00------2.00------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCCTT..............................................................................................................................................312.000.002.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTAATG.............................................................................................................................................322.000.001.001.00-----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTTAAAG............................................................................................................................................342.000.00-1.001.00----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTAAG...............................................................................................................................................312.000.00-1.00-1.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTATT..............................................................................................................................................312.000.001.001.00-----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTGG..............................................................................................................................................292.000.00-1.00--1.00--------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTCCAG...............................................................................................................................................302.000.00-1.00-1.00---------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTACAG..............................................................................................................................................322.000.00-2.00-----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCATG..............................................................................................................................................292.000.00--1.001.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTAACG.............................................................................................................................................322.000.002.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTACG..............................................................................................................................................312.000.001.001.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCCGG.............................................................................................................................................322.000.001.001.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTCCTT...............................................................................................................................................302.000.00--1.00--1.00-------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCTAG..............................................................................................................................................312.000.001.00--1.00---------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTCCT...............................................................................................................................................312.000.00--1.001.00---------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTAACG.............................................................................................................................................331.000.001.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTAAGG............................................................................................................................................331.000.00-1.00-----------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTCTAT...............................................................................................................................................291.000.001.00------------------------
.................................................................................TTTTTTTTTTTTTTTTTTTTTTTTTGCACTCC.........................................................................................................................................321.000.00------1.00------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTAAAA.............................................................................................................................................321.000.001.00------------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTAT...............................................................................................................................................311.000.00-1.00-----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTCAGG................................................................................................................................................301.000.00-----1.00-------------------
....................................................................AGTTAATGTTTAATTTTGGAG.................................................................................................................................................................211.000.00------1.00------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTCCC...............................................................................................................................................311.000.00-1.00-----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTCC..............................................................................................................................................291.000.00----1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTCTC..............................................................................................................................................321.000.00-----1.00-------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTAAAT............................................................................................................................................331.000.001.00------------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTGT..............................................................................................................................................291.000.00---1.00---------------------
......................................................................................................................TCTCACTTTGCTGCCCAGGCTAAG............................................................................................................241.000.00--------1.00----------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTCAGT...............................................................................................................................................311.000.00---1.00---------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTCAT................................................................................................................................................281.000.001.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTCTAT...............................................................................................................................................301.000.00---1.00---------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTAA................................................................................................................................................301.000.00--1.00----------------------
....................................................................................TTTTTTTTTTTTTTTTTTTTTTGCAGAGCCAG......................................................................................................................................321.000.00----1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTACAC..............................................................................................................................................321.000.00-1.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCTCT..............................................................................................................................................311.000.00-----1.00-------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTCGGG....................................................................................................................................................251.000.00----1.00--------------------
...............................CAAGTAGCTGGAACTACAG........................................................................................................................................................................................................1901.001.00-----------------1.00-------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTCACC...............................................................................................................................................291.000.00----1.00--------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTCAAG...............................................................................................................................................301.000.00-----1.00-------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTACCC..............................................................................................................................................321.000.001.00------------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTCCTG...................................................................................................................................................271.000.001.00------------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTCGGG...............................................................................................................................................291.000.00----1.00--------------------
........................................................................................TTTTTTTTTTTTTTTTTTGCAGAAACT.......................................................................................................................................271.000.00-----1.00-------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCAAG..............................................................................................................................................311.000.001.00------------------------
.......................................................................................................................CTCACTTTGCTGCCCAGG.................................................................................................................1801.001.00----------1.00--------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTCTAG.............................................................................................................................................331.000.00--1.00----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCAAT..............................................................................................................................................291.000.00--1.00----------------------
..............................................................................................................................TGCTGCCCAGGCTGTCTCGG........................................................................................................201.000.00------1.00------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCGGG..............................................................................................................................................301.000.00-1.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCTTT.............................................................................................................................................321.000.001.00------------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTCTT....................................................................................................................................................261.000.001.00------------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTCCAC...............................................................................................................................................291.000.00-1.00-----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCAA...............................................................................................................................................281.000.00---1.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTCCC.................................................................................................................................................281.000.00-1.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTCCCT...............................................................................................................................................301.000.001.00------------------------
............................................................................TTTAATTTTTTTTTTTTCACC.........................................................................................................................................................211.000.00----1.00--------------------
.........................................................................................................................................................................................................AGTGGTGGGATTACAGGCAAGCC..........................231.000.00------1.00------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTCACC....................................................................................................................................................261.000.00--1.00----------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTCCAG...............................................................................................................................................291.000.001.00------------------------
.................................................................................TTTTTTTTTTTTTTTTTTTTTTTTTGCACGC..........................................................................................................................................311.000.00------1.00------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTCAAG.................................................................................................................................................291.000.00-----1.00-------------------
................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGTTC............................................................................................................................................301.000.00----1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTCG...................................................................................................................................................271.000.00--1.00----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTCA..............................................................................................................................................291.000.001.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCCG...............................................................................................................................................301.000.00-1.00-----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTCTTG..............................................................................................................................................321.000.00--1.00----------------------
....................................................................................TTTTTTTTTTTTTTTTTTTTTTGCAGAACC........................................................................................................................................301.000.00----1.00--------------------
..................................................................................................................................................................................AATCTTTTTACTTTGCAG......................................................181.000.00---------------1.00---------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCTGT.............................................................................................................................................321.000.001.00------------------------
................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGCAAAAT.........................................................................................................................................331.000.00-----1.00-------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTTA..............................................................................................................................................291.000.00-1.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTCGGC....................................................................................................................................................251.000.00----1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTCCC................................................................................................................................................301.000.00-1.00-----------------------
..............................................................................................................................................................................AAACAATCTTTTTACTTTCAT.......................................................211.000.00-----1.00-------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCGGG..............................................................................................................................................291.000.00-----1.00-------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTCC...................................................................................................................................................271.000.00------1.00------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTCCGG...............................................................................................................................................291.000.001.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCTAG.............................................................................................................................................321.000.00-1.00-----------------------
.............................................................................................................................................................................................................GTGGGATTACAGGCATGT...........................181.000.00------------1.00------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTCAAT.............................................................................................................................................331.000.00--1.00----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTCAT...............................................................................................................................................311.000.00---1.00---------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTAATG.............................................................................................................................................331.000.00---1.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCCTT.............................................................................................................................................321.000.001.00------------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTCAG.................................................................................................................................................291.000.00---1.00---------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCCAT..............................................................................................................................................301.000.00---1.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTCTAG................................................................................................................................................291.000.00--1.00----------------------
...............................CAAGTAGCTGGAACTCTGG........................................................................................................................................................................................................191.000.00--------------1.00----------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCGG...............................................................................................................................................291.000.00----1.00--------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCTGG.............................................................................................................................................321.000.001.00------------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTCCAG..................................................................................................................................................281.000.00---1.00---------------------
.......................................................................................TTTTTTTTTTTTTTTTTTTGCAGAGAAGG......................................................................................................................................291.000.00----1.00--------------------
......................................................................................................................TCTCACTTTGCTGCCCAGGCTGTT............................................................................................................241.000.00-------1.00-----------------
.............................................................................TTAATTTTTTTTTTTTTTTTTCCAG....................................................................................................................................................251.000.00-1.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCAAG.............................................................................................................................................321.000.00-1.00-----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTAAT..............................................................................................................................................321.000.00--1.00----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTCCG..............................................................................................................................................321.000.00-1.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTCCGG....................................................................................................................................................251.000.00-1.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCTAT.............................................................................................................................................321.000.00-----1.00-------------------
...........................................................................GTTTAATTTTTTTTTTTTTTTTTTATT....................................................................................................................................................271.000.00---1.00---------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTCATG................................................................................................................................................301.000.00-1.00-----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTAAAG..............................................................................................................................................321.000.001.00------------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCTTA..............................................................................................................................................301.000.00-----1.00-------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCG................................................................................................................................................291.000.00---1.00---------------------
...........................................................................GTTTAATTTTTTTTTTTTAATA.........................................................................................................................................................221.000.00----1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTCAT................................................................................................................................................301.000.001.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTCCTT....................................................................................................................................................251.000.001.00------------------------
..............................................................................TAATTTTTTTTTTTTTTTTTCGGC....................................................................................................................................................241.000.00----1.00--------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCCC..............................................................................................................................................311.000.00-----1.00-------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTCAT...................................................................................................................................................271.000.00---1.00---------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTCTTG....................................................................................................................................................261.000.00---1.00---------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTCCG................................................................................................................................................301.000.001.00------------------------
..........................................................................TGTTTAATTTTTTTTTTTTTTTTTTTTTTTAG................................................................................................................................................321.000.00----1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTCGAG..................................................................................................................................................281.000.00-----1.00-------------------
........................................................................................TTTTTTTTTTTTTTTTTTGCAGAGGCGG......................................................................................................................................281.000.00----1.00--------------------
.......................................................................................TTTTTTTTTTTTTTTTTTTGCAGAGAAGGG.....................................................................................................................................301.000.00----1.00--------------------
.........................................................................ATGTTTAATTTTTTTTTTTTTTTTTTCTAG...................................................................................................................................................301.000.00---1.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCTCT.............................................................................................................................................321.000.00--1.00----------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCACG..............................................................................................................................................301.000.00-----1.00-------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCG...............................................................................................................................................301.000.00-1.00-----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTCTTG...................................................................................................................................................271.000.00--1.00----------------------
...........................................................................GTTTAATTTTTTTTTTTTTTTTTTTTTTAG.................................................................................................................................................301.000.00-----1.00-------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTCCTT...............................................................................................................................................291.000.00-1.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTATTA.............................................................................................................................................321.000.001.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTCCC................................................................................................................................................291.000.00--1.00----------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTCCCG...............................................................................................................................................291.000.00--1.00----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCCTC..............................................................................................................................................291.000.00----1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTCGG...................................................................................................................................................271.000.00----1.00--------------------
..........................................................................TGTTTAATTTTTTTTTTTTTTTTTTTTCGTC.................................................................................................................................................311.000.00----1.00--------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTCCTG................................................................................................................................................301.000.00-1.00-----------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTCG....................................................................................................................................................261.000.00---1.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCCAT..............................................................................................................................................311.000.001.00------------------------
................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGCGAG...........................................................................................................................................311.000.00------1.00------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCCAT..............................................................................................................................................291.000.001.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTACGT............................................................................................................................................331.000.001.00------------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCAT..............................................................................................................................................311.000.00---1.00---------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCTGG..............................................................................................................................................301.000.00-1.00-----------------------
.................................................................................TTTTTTTTTTTTTTTTTTTTTTTTTGCAGCAAC........................................................................................................................................331.000.00------1.00------------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCTGC..............................................................................................................................................301.000.00----1.00--------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTGTCT............................................................................................................................................331.000.00---1.00---------------------
.........................................................................ATGTTTAATTTTTTTTTTTTTTTAA........................................................................................................................................................251.000.00----1.00--------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTACC.............................................................................................................................................321.000.00----1.00--------------------
..............................CCAAGTAGCTGGAACAAAA.........................................................................................................................................................................................................191.000.00----------------1.00--------
..........................................................................TGTTTAATTTTTTTTTTTTTTTTTAAAG....................................................................................................................................................281.000.00-----1.00-------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTAAT...............................................................................................................................................311.000.00-1.00-----------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTTTGTTCC...........................................................................................................................................321.000.00----1.00--------------------
.............................CCCAAGTAGCTGGAACTCGG.........................................................................................................................................................................................................201.000.00-----------1.00-------------
..............................................................................TAATTTTTTTTTTTTTTTTTTTTTTTCCTT..............................................................................................................................................301.000.00---1.00---------------------
....................................................................................TTTTTTTTTTTTTTTTTTTTTTGCAGAAACT.......................................................................................................................................311.000.00------1.00------------------
............................................................................TTTAATTTTTTTTTTTTTTTTTTTTTTTTAGGT.............................................................................................................................................331.000.00----1.00--------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTCAAC..............................................................................................................................................291.000.00---1.00---------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTCCG..............................................................................................................................................311.000.00-1.00-----------------------
...................................................................................TTTTTTTTTTTTTTTTTTTTTTTGCAGAAATC.......................................................................................................................................321.000.00-----1.00-------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTCATG..............................................................................................................................................311.000.00-1.00-----------------------
.............................................................................TTAATTTTTTTTTTTTTTTTTTTTTTTTTATTA............................................................................................................................................331.000.00--1.00----------------------
....................................AGCTGGAACTACAGGTAGGTGCC...............................................................................................................................................................................................2320.500.50---------------------0.50---
........................................................................................................................TCACTTTGCTGCCCAGGCTGT.............................................................................................................2130.330.33--------0.33----------------
.......................................................................................................................CTCACTTTGCTGCCCAGGCTGT.............................................................................................................2230.330.33-------0.33-----------------
.....................................GCTGGAACTACAGGTAG....................................................................................................................................................................................................1750.200.20------------------------0.20
................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGCAGAG..........................................................................................................................................3250.200.20----0.20--------------------
................................................................................ATTTTTTTTTTTTTTTTTTTTTTTTTGCAGA...........................................................................................................................................3170.140.14----0.14--------------------
...............................................................................AATTTTTTTTTTTTTTTTTTTTTTTTTGCAG............................................................................................................................................3170.140.14----0.14--------------------

Antisense strand
GGGCTCAAGCAATCTTCCAAGCTCAGCCTCCCAAGTAGCTGGAACTACAGGTAGGTGCCACAATGTCCAGTTAATGTTTAATTTTTTTTTTTTTTTTTTTTTTTTTGCAGAGATGTGGTCTCACTTTGCTGCCCAGGCTGTCCTGTAACTCCTGGGCTCAAGACTCCTGGGCGCAAACAATCTTTTTACTTTGCCTCTCACAGTGGTGGGATTACAGGCATGGGCAACCATGCCCGGCCAAGTATTGTCT
..........................................................................................................((((....(((....)))....)))).((((....)))).........................................................................................................
........................................................................73.......................................................................146......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189787SRR189786SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM956925PAZD5SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
................CCAAGCTCAGCCTCCCAAGTGAGG.................................................................................................................................................................................................................. 241.000.00----1.00--------------------
...........................................................................GTTTAATTTTTTTTTTTTTTTTTTTTTTTTTCCC............................................................................................................................................. 341.000.00------------------1.00------
...................AGCTCAGCCTCCCAAGTAGCTGGAGAGG........................................................................................................................................................................................................... 281.000.00------1.00------------------
......................TCAGCCTCCCAAGTAGCTGGAACTCGCG........................................................................................................................................................................................................ 281.000.00------1.00------------------
.......................................................................................................................................GGCTGTCCTGTAACTCCCC................................................................................................ 191.000.00------1.00------------------
....................GCTACTTGGGAGGCTGAGC................................................................................................................................................................................................................... 1901.001.00-------------1.00-----------
.............CTTCCAAGCTCAGCCTCTGG......................................................................................................................................................................................................................... 201.000.00---------1.00---------------
.CTTGGAAGATTGCTTGAGCC..................................................................................................................................................................................................................................... 2011.001.00-------------------1.00-----
................CCAAGCTCAGCCTCCCACGGG..................................................................................................................................................................................................................... 211.000.00--------------------1.00----
...............................................................................................................................CAGGACAGCCTGGGCAGC......................................................................................................... 1840.250.25----------------------0.25--
..............................................................................................................................AGGACAGCCTGGGCAGCA.......................................................................................................... 1840.250.25-----------------------0.25-